RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-223ENST00000551551 NISCHQ9Y2I1 1504 aa21.83■■□□□ 1.09
ATXN2-223ENST00000551551 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
ATXN2-223ENST00000551551 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
ATXN2-223ENST00000551551 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
ATXN2-223ENST00000551551 ABCC9O60706 1549 aa19.12■□□□□ 0.65
ATXN2-223ENST00000551551 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
ATXN2-223ENST00000551551 NACADO15069 1562 aa18.45■□□□□ 0.54
ATXN2-223ENST00000551551 DCAF8L2P0C7V8 631 aa18.41■□□□□ 0.54
ATXN2-223ENST00000551551 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
ATXN2-223ENST00000551551 DCAF1Q9Y4B6 1507 aa18.17■□□□□ 0.5
ATXN2-223ENST00000551551 ZCCHC6Q5VYS8 1495 aaKnown RBP18.1■□□□□ 0.49
ATXN2-223ENST00000551551 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
ATXN2-223ENST00000551551 SHROOM4Q9ULL8 1493 aa17.85■□□□□ 0.45
ATXN2-223ENST00000551551 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
ATXN2-223ENST00000551551 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
ATXN2-223ENST00000551551 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
ATXN2-223ENST00000551551 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
ATXN2-223ENST00000551551 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
ATXN2-223ENST00000551551 EIF4G1Q04637 1599 aaKnown RBP17.36■□□□□ 0.37
ATXN2-223ENST00000551551 CC2D2AQ9P2K1 1620 aa17.3■□□□□ 0.36
ATXN2-223ENST00000551551 CECR2Q9BXF3 1484 aa17.3■□□□□ 0.36
ATXN2-223ENST00000551551 PHF23Q9BUL5 403 aaPredicted RBP17.29■□□□□ 0.36
ATXN2-223ENST00000551551 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
ATXN2-223ENST00000551551 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
ATXN2-223ENST00000551551 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
ATXN2-223ENST00000551551 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
ATXN2-223ENST00000551551 SMARCA4P51532 1647 aa16.9■□□□□ 0.3
ATXN2-223ENST00000551551 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
ATXN2-223ENST00000551551 PEG3Q9GZU2 1588 aa16.83■□□□□ 0.28
ATXN2-223ENST00000551551 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
ATXN2-223ENST00000551551 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
ATXN2-223ENST00000551551 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
ATXN2-223ENST00000551551 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.24
ATXN2-223ENST00000551551 LAMC3Q9Y6N6 1575 aa16.58■□□□□ 0.24
ATXN2-223ENST00000551551 CUX2O14529 1486 aa16.57■□□□□ 0.24
ATXN2-223ENST00000551551 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
ATXN2-223ENST00000551551 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
ATXN2-223ENST00000551551 WIZO95785 1651 aa16.47■□□□□ 0.23
ATXN2-223ENST00000551551 NESP48681 1621 aa16.43■□□□□ 0.22
ATXN2-223ENST00000551551 TOP2AP11388 1531 aaKnown RBP16.41■□□□□ 0.22
ATXN2-223ENST00000551551 FOXD1Q16676 465 aa16.38■□□□□ 0.21
ATXN2-223ENST00000551551 CFTRP13569 1480 aa16.35■□□□□ 0.21
ATXN2-223ENST00000551551 DNAJC5Q9H3Z4 198 aa16.3■□□□□ 0.2
ATXN2-223ENST00000551551 MRC2Q9UBG0 1479 aa16.28■□□□□ 0.2
ATXN2-223ENST00000551551 CEP164Q9UPV0 1460 aa16.28■□□□□ 0.2
ATXN2-223ENST00000551551 FANCD2Q9BXW9 1451 aa16.26■□□□□ 0.19
ATXN2-223ENST00000551551 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
ATXN2-223ENST00000551551 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
ATXN2-223ENST00000551551 KIF21AQ7Z4S6 1674 aa16.2■□□□□ 0.18
ATXN2-223ENST00000551551 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
ATXN2-223ENST00000551551 WDR62O43379 1518 aa16.18■□□□□ 0.18
ATXN2-223ENST00000551551 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
ATXN2-223ENST00000551551 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
ATXN2-223ENST00000551551 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
ATXN2-223ENST00000551551 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
ATXN2-223ENST00000551551 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
ATXN2-223ENST00000551551 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
ATXN2-223ENST00000551551 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
ATXN2-223ENST00000551551 SOGA1O94964 1423 aa15.84■□□□□ 0.13
ATXN2-223ENST00000551551 WDR97A6NE52 1622 aa15.8■□□□□ 0.12
ATXN2-223ENST00000551551 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
ATXN2-223ENST00000551551 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
ATXN2-223ENST00000551551 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
ATXN2-223ENST00000551551 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.11
ATXN2-223ENST00000551551 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.11
ATXN2-223ENST00000551551 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.19e-7■■■■■ 31.4
ATXN2-223ENST00000551551 CUX1P39880 1505 aa15.69■□□□□ 0.1
ATXN2-223ENST00000551551 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
ATXN2-223ENST00000551551 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
ATXN2-223ENST00000551551 FBLN2P98095 1184 aa15.68■□□□□ 0.1
ATXN2-223ENST00000551551 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
ATXN2-223ENST00000551551 GRIN2BQ13224 1484 aa15.66■□□□□ 0.1
ATXN2-223ENST00000551551 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
ATXN2-223ENST00000551551 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
ATXN2-223ENST00000551551 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
ATXN2-223ENST00000551551 GAPVD1Q14C86 1478 aa15.62■□□□□ 0.09
ATXN2-223ENST00000551551 TOP2BQ02880 1626 aa15.58■□□□□ 0.09
ATXN2-223ENST00000551551 SYNJ2O15056 1496 aa15.57■□□□□ 0.08
ATXN2-223ENST00000551551 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
ATXN2-223ENST00000551551 SNAPC4Q5SXM2 1469 aa15.54■□□□□ 0.08
ATXN2-223ENST00000551551 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
ATXN2-223ENST00000551551 SYNJ1O43426 1573 aa15.51■□□□□ 0.07
ATXN2-223ENST00000551551 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
ATXN2-223ENST00000551551 ERICH3Q5RHP9 1530 aa15.48■□□□□ 0.07
ATXN2-223ENST00000551551 CYB5RLQ6IPT4 315 aa15.46■□□□□ 0.07
ATXN2-223ENST00000551551 ARHGEF11O15085 1522 aa15.46■□□□□ 0.07
ATXN2-223ENST00000551551 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.06
ATXN2-223ENST00000551551 CHD1O14646 1710 aa15.45■□□□□ 0.06
ATXN2-223ENST00000551551 KIF27Q86VH2 1401 aa15.44■□□□□ 0.06
ATXN2-223ENST00000551551 POTEDQ86YR6 584 aa15.44■□□□□ 0.06
ATXN2-223ENST00000551551 MSH5O43196 834 aa15.42■□□□□ 0.06
ATXN2-223ENST00000551551 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
ATXN2-223ENST00000551551 RIMBP3CA6NJZ7 1639 aa15.41■□□□□ 0.06
ATXN2-223ENST00000551551 RIMBP3BA6NNM3 1639 aa15.41■□□□□ 0.06
ATXN2-223ENST00000551551 RIMBP3Q9UFD9 1639 aa15.41■□□□□ 0.06
ATXN2-223ENST00000551551 GRIN2AQ12879 1464 aa15.4■□□□□ 0.06
ATXN2-223ENST00000551551 CLASP1Q7Z460 1538 aa15.37■□□□□ 0.05
ATXN2-223ENST00000551551 NUP160Q12769 1436 aa15.35■□□□□ 0.05
ATXN2-223ENST00000551551 IGF1RP08069 1367 aa15.34■□□□□ 0.05
ATXN2-223ENST00000551551 JPH4Q96JJ6 628 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms