RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 ADCY10Q96PN6 1610 aa12.7□□□□□ -0.38
SMARCD1-210ENST00000551352 IGF1RP08069 1367 aa12.65□□□□□ -0.38
SMARCD1-210ENST00000551352 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
SMARCD1-210ENST00000551352 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
SMARCD1-210ENST00000551352 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
SMARCD1-210ENST00000551352 MAPKBP1O60336 1514 aa12.62□□□□□ -0.39
SMARCD1-210ENST00000551352 KIF27Q86VH2 1401 aa12.6□□□□□ -0.39
SMARCD1-210ENST00000551352 TSPOAP1O95153 1857 aa12.59□□□□□ -0.39
SMARCD1-210ENST00000551352 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
SMARCD1-210ENST00000551352 PPRC1Q5VV67 1664 aaKnown RBP12.57□□□□□ -0.4
SMARCD1-210ENST00000551352 IQGAP2Q13576 1575 aa12.55□□□□□ -0.4
SMARCD1-210ENST00000551352 CARMIL1Q5VZK9 1371 aa12.53□□□□□ -0.4
SMARCD1-210ENST00000551352 DISP1Q96F81 1524 aa12.52□□□□□ -0.41
SMARCD1-210ENST00000551352 ABCC2Q92887 1545 aa12.5□□□□□ -0.41
SMARCD1-210ENST00000551352 CTTNBP2Q8WZ74 1663 aa12.5□□□□□ -0.41
SMARCD1-210ENST00000551352 KDM6BO15054 1643 aa12.49□□□□□ -0.41
SMARCD1-210ENST00000551352 FAM69CQ0P6D2 419 aa12.48□□□□□ -0.41
SMARCD1-210ENST00000551352 KIAA0556O60303 1618 aa12.48□□□□□ -0.41
SMARCD1-210ENST00000551352 CHIC1Q5VXU3 224 aa12.47□□□□□ -0.41
SMARCD1-210ENST00000551352 UGGT2Q9NYU1 1516 aa12.47□□□□□ -0.41
SMARCD1-210ENST00000551352 ZCCHC11Q5TAX3 1644 aaKnown RBP12.46□□□□□ -0.41
SMARCD1-210ENST00000551352 PTPRGP23470 1445 aa12.45□□□□□ -0.42
SMARCD1-210ENST00000551352 UHRF1BP1LA0JNW5 1464 aa12.45□□□□□ -0.42
SMARCD1-210ENST00000551352 TNIKQ9UKE5 1360 aa12.44□□□□□ -0.42
SMARCD1-210ENST00000551352 GLI2P10070 1586 aa12.44□□□□□ -0.42
SMARCD1-210ENST00000551352 RAPGEF2Q9Y4G8 1499 aa12.44□□□□□ -0.42
SMARCD1-210ENST00000551352 AEBP2Q6ZN18 517 aaPredicted RBP12.43□□□□□ -0.42
SMARCD1-210ENST00000551352 MAP3K4Q9Y6R4 1608 aa12.43□□□□□ -0.42
SMARCD1-210ENST00000551352 ASXL2Q76L83 1435 aa12.42□□□□□ -0.42
SMARCD1-210ENST00000551352 CARMIL2Q6F5E8 1435 aa12.41□□□□□ -0.42
SMARCD1-210ENST00000551352 KDM5BQ9UGL1 1544 aa12.41□□□□□ -0.42
SMARCD1-210ENST00000551352 TTBK1Q5TCY1 1321 aaPredicted RBP12.4□□□□□ -0.42
SMARCD1-210ENST00000551352 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMARCD1-210ENST00000551352 UACAQ9BZF9 1416 aa12.39□□□□□ -0.43
SMARCD1-210ENST00000551352 COL17A1Q9UMD9 1497 aaPredicted RBP12.38□□□□□ -0.43
SMARCD1-210ENST00000551352 EPRSP07814 1512 aaKnown RBP12.37□□□□□ -0.43
SMARCD1-210ENST00000551352 PLB1Q6P1J6 1458 aa12.37□□□□□ -0.43
SMARCD1-210ENST00000551352 ABCA8O94911 1581 aa12.36□□□□□ -0.43
SMARCD1-210ENST00000551352 PRXQ9BXM0 1461 aa12.35□□□□□ -0.43
SMARCD1-210ENST00000551352 KDM4FA0A1W2PPD8 638 aa12.35□□□□□ -0.43
SMARCD1-210ENST00000551352 CFAP43Q8NDM7 1665 aa12.31□□□□□ -0.44
SMARCD1-210ENST00000551352 WDR7Q9Y4E6 1490 aa12.29□□□□□ -0.44
SMARCD1-210ENST00000551352 SAMD9Q5K651 1589 aa12.29□□□□□ -0.44
SMARCD1-210ENST00000551352 ADGRL1O94910 1474 aa12.26□□□□□ -0.45
SMARCD1-210ENST00000551352 GOLGA3Q08378 1498 aa12.25□□□□□ -0.45
SMARCD1-210ENST00000551352 TEX14Q8IWB6 1497 aa12.23□□□□□ -0.45
SMARCD1-210ENST00000551352 MAGI3Q5TCQ9 1506 aa12.22□□□□□ -0.45
SMARCD1-210ENST00000551352 KIF21BO75037 1637 aa12.22□□□□□ -0.45
SMARCD1-210ENST00000551352 ABCA9Q8IUA7 1624 aa12.21□□□□□ -0.46
SMARCD1-210ENST00000551352 RAPGEF6Q8TEU7 1601 aa12.21□□□□□ -0.46
SMARCD1-210ENST00000551352 ATP10BO94823 1461 aa12.2□□□□□ -0.46
SMARCD1-210ENST00000551352 CD109Q6YHK3 1445 aa12.18□□□□□ -0.46
SMARCD1-210ENST00000551352 FRMPD1Q5SYB0 1578 aa12.17□□□□□ -0.46
SMARCD1-210ENST00000551352 HECW2Q9P2P5 1572 aa12.15□□□□□ -0.46
SMARCD1-210ENST00000551352 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
SMARCD1-210ENST00000551352 NUP153P49790 1475 aaKnown RBP12.14□□□□□ -0.47
SMARCD1-210ENST00000551352 ARAP3Q8WWN8 1544 aa12.13□□□□□ -0.47
SMARCD1-210ENST00000551352 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
SMARCD1-210ENST00000551352 KCNH8Q96L42 1107 aa12.13□□□□□ -0.47
SMARCD1-210ENST00000551352 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
SMARCD1-210ENST00000551352 FHOD3Q2V2M9 1422 aa12.11□□□□□ -0.47
SMARCD1-210ENST00000551352 SIGLEC1Q9BZZ2 1709 aa12.11□□□□□ -0.47
SMARCD1-210ENST00000551352 ADAMTSL3P82987 1691 aa12.11□□□□□ -0.47
SMARCD1-210ENST00000551352 RICTORQ6R327 1708 aa12.11□□□□□ -0.47
SMARCD1-210ENST00000551352 LRRIQ1Q96JM4 1722 aa12.1□□□□□ -0.47
SMARCD1-210ENST00000551352 TTC37Q6PGP7 1564 aa12.09□□□□□ -0.47
SMARCD1-210ENST00000551352 EEA1Q15075 1411 aa12.08□□□□□ -0.48
SMARCD1-210ENST00000551352 BCORL1Q5H9F3 1711 aa12.07□□□□□ -0.48
SMARCD1-210ENST00000551352 EFCAB5A4FU69 1503 aa12.06□□□□□ -0.48
SMARCD1-210ENST00000551352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMARCD1-210ENST00000551352 NEO1Q92859 1461 aa12.05□□□□□ -0.48
SMARCD1-210ENST00000551352 CDK13Q14004 1512 aaKnown RBP12.05□□□□□ -0.48
SMARCD1-210ENST00000551352 MADDQ8WXG6 1647 aa12.04□□□□□ -0.48
SMARCD1-210ENST00000551352 ARHGEF40Q8TER5 1519 aa12.03□□□□□ -0.48
SMARCD1-210ENST00000551352 FAM9AQ8IZU1 332 aaPredicted RBP12.02□□□□□ -0.49
SMARCD1-210ENST00000551352 RANGAP1P46060 587 aaPredicted RBP12.01□□□□□ -0.49
SMARCD1-210ENST00000551352 RIMS1Q86UR5 1692 aaKnown RBP12□□□□□ -0.49
SMARCD1-210ENST00000551352 RAPGEF3O95398 923 aa12□□□□□ -0.49
SMARCD1-210ENST00000551352 CFAP74Q9C0B2 1584 aa12□□□□□ -0.49
SMARCD1-210ENST00000551352 KIF14Q15058 1648 aa12□□□□□ -0.49
SMARCD1-210ENST00000551352 ARHGAP35Q9NRY4 1499 aa11.99□□□□□ -0.49
SMARCD1-210ENST00000551352 ZMYM4Q5VZL5 1548 aa11.99□□□□□ -0.49
SMARCD1-210ENST00000551352 MYO5CQ9NQX4 1742 aa11.99□□□□□ -0.49
SMARCD1-210ENST00000551352 PTPRMP28827 1452 aa11.98□□□□□ -0.49
SMARCD1-210ENST00000551352 PHLDB1Q86UU1 1377 aa11.98□□□□□ -0.49
SMARCD1-210ENST00000551352 ILDR1Q86SU0 546 aaPredicted RBP11.98□□□□□ -0.49
SMARCD1-210ENST00000551352 LOC105371045A0A1W2PR82 267 aa11.97□□□□□ -0.49
SMARCD1-210ENST00000551352 HECW1Q76N89 1606 aa11.97□□□□□ -0.49
SMARCD1-210ENST00000551352 FANCAO15360 1455 aa11.96□□□□□ -0.49
SMARCD1-210ENST00000551352 AKNAQ7Z591 1439 aa11.96□□□□□ -0.49
SMARCD1-210ENST00000551352 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
SMARCD1-210ENST00000551352 CDC42BPBQ9Y5S2 1711 aa11.94□□□□□ -0.5
SMARCD1-210ENST00000551352 DENND4BO75064 1496 aaPredicted RBP11.94□□□□□ -0.5
SMARCD1-210ENST00000551352 FER1L4A9Z1Z3 1794 aa11.93□□□□□ -0.5
SMARCD1-210ENST00000551352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
SMARCD1-210ENST00000551352 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
SMARCD1-210ENST00000551352 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
SMARCD1-210ENST00000551352 PCF11O94913 1555 aaKnown RBP11.92□□□□□ -0.5
SMARCD1-210ENST00000551352 LMTK3Q96Q04 1460 aa11.91□□□□□ -0.5
SMARCD1-210ENST00000551352 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms