RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-223ENST00000550188 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
ARFGAP1-223ENST00000550188 JPH4Q96JJ6 628 aa20.17■□□□□ 0.82
ARFGAP1-223ENST00000550188 PRG4Q92954 1404 aaPredicted RBP20.16■□□□□ 0.82
ARFGAP1-223ENST00000550188 RAPGEF2Q9Y4G8 1499 aa20.16■□□□□ 0.82
ARFGAP1-223ENST00000550188 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
ARFGAP1-223ENST00000550188 IQGAP2Q13576 1575 aa20.05■□□□□ 0.8
ARFGAP1-223ENST00000550188 EEA1Q15075 1411 aa20.05■□□□□ 0.8
ARFGAP1-223ENST00000550188 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
ARFGAP1-223ENST00000550188 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
ARFGAP1-223ENST00000550188 CARMIL2Q6F5E8 1435 aa19.99■□□□□ 0.79
ARFGAP1-223ENST00000550188 UGGT2Q9NYU1 1516 aa19.95■□□□□ 0.78
ARFGAP1-223ENST00000550188 TNIKQ9UKE5 1360 aa19.93■□□□□ 0.78
ARFGAP1-223ENST00000550188 TRHP20396 242 aaPredicted RBP19.92■□□□□ 0.78
ARFGAP1-223ENST00000550188 DISP1Q96F81 1524 aa19.92■□□□□ 0.78
ARFGAP1-223ENST00000550188 PTPRGP23470 1445 aa19.91■□□□□ 0.78
ARFGAP1-223ENST00000550188 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
ARFGAP1-223ENST00000550188 CTTNBP2Q8WZ74 1663 aa19.9■□□□□ 0.78
ARFGAP1-223ENST00000550188 KIAA0556O60303 1618 aa19.86■□□□□ 0.77
ARFGAP1-223ENST00000550188 GOLGA3Q08378 1498 aa19.85■□□□□ 0.77
ARFGAP1-223ENST00000550188 TTBK1Q5TCY1 1321 aaPredicted RBP19.84■□□□□ 0.77
ARFGAP1-223ENST00000550188 ADCY10Q96PN6 1610 aa19.84■□□□□ 0.77
ARFGAP1-223ENST00000550188 NPM1P06748 294 aaKnown RBP eCLIP19.83■□□□□ 0.77
ARFGAP1-223ENST00000550188 KIF21BO75037 1637 aa19.81■□□□□ 0.76
ARFGAP1-223ENST00000550188 UACAQ9BZF9 1416 aa19.77■□□□□ 0.76
ARFGAP1-223ENST00000550188 UHRF1BP1LA0JNW5 1464 aa19.77■□□□□ 0.76
ARFGAP1-223ENST00000550188 MAPKBP1O60336 1514 aa19.76■□□□□ 0.75
ARFGAP1-223ENST00000550188 ABCC2Q92887 1545 aa19.76■□□□□ 0.75
ARFGAP1-223ENST00000550188 AEBP2Q6ZN18 517 aaPredicted RBP19.71■□□□□ 0.75
ARFGAP1-223ENST00000550188 SAMD9Q5K651 1589 aa19.69■□□□□ 0.74
ARFGAP1-223ENST00000550188 ABCC10Q5T3U5 1492 aa19.68■□□□□ 0.74
ARFGAP1-223ENST00000550188 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
ARFGAP1-223ENST00000550188 KDM5BQ9UGL1 1544 aa19.66■□□□□ 0.74
ARFGAP1-223ENST00000550188 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
ARFGAP1-223ENST00000550188 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
ARFGAP1-223ENST00000550188 ABCA8O94911 1581 aa19.65■□□□□ 0.74
ARFGAP1-223ENST00000550188 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
ARFGAP1-223ENST00000550188 DIP2BQ9P265 1576 aa19.63■□□□□ 0.73
ARFGAP1-223ENST00000550188 ASXL2Q76L83 1435 aa19.63■□□□□ 0.73
ARFGAP1-223ENST00000550188 RANGAP1P46060 587 aaPredicted RBP19.63■□□□□ 0.73
ARFGAP1-223ENST00000550188 FAM69CQ0P6D2 419 aa19.63■□□□□ 0.73
ARFGAP1-223ENST00000550188 EFCAB5A4FU69 1503 aa19.62■□□□□ 0.73
ARFGAP1-223ENST00000550188 ZCCHC11Q5TAX3 1644 aaKnown RBP19.59■□□□□ 0.73
ARFGAP1-223ENST00000550188 KIF13AQ9H1H9 1805 aa19.59■□□□□ 0.73
ARFGAP1-223ENST00000550188 FHOD3Q2V2M9 1422 aa19.59■□□□□ 0.73
ARFGAP1-223ENST00000550188 WDR7Q9Y4E6 1490 aa19.53■□□□□ 0.72
ARFGAP1-223ENST00000550188 EPRSP07814 1512 aaKnown RBP19.51■□□□□ 0.71
ARFGAP1-223ENST00000550188 RAPGEF6Q8TEU7 1601 aa19.51■□□□□ 0.71
ARFGAP1-223ENST00000550188 GLI2P10070 1586 aa19.51■□□□□ 0.71
ARFGAP1-223ENST00000550188 ATP10BO94823 1461 aa19.48■□□□□ 0.71
ARFGAP1-223ENST00000550188 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
ARFGAP1-223ENST00000550188 ARID3CA6NKF2 412 aa19.47■□□□□ 0.71
ARFGAP1-223ENST00000550188 NUP153P49790 1475 aaKnown RBP19.47■□□□□ 0.71
ARFGAP1-223ENST00000550188 FMN1Q68DA7 1419 aa19.44■□□□□ 0.7
ARFGAP1-223ENST00000550188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
ARFGAP1-223ENST00000550188 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
ARFGAP1-223ENST00000550188 MAP3K4Q9Y6R4 1608 aa19.4■□□□□ 0.7
ARFGAP1-223ENST00000550188 KCNH8Q96L42 1107 aa19.39■□□□□ 0.69
ARFGAP1-223ENST00000550188 TEX14Q8IWB6 1497 aa19.37■□□□□ 0.69
ARFGAP1-223ENST00000550188 TSPOAP1O95153 1857 aa19.36■□□□□ 0.69
ARFGAP1-223ENST00000550188 CLIP1P30622 1438 aa19.35■□□□□ 0.69
ARFGAP1-223ENST00000550188 PPRC1Q5VV67 1664 aaKnown RBP19.35■□□□□ 0.69
ARFGAP1-223ENST00000550188 HECW1Q76N89 1606 aa19.35■□□□□ 0.69
ARFGAP1-223ENST00000550188 CD109Q6YHK3 1445 aa19.34■□□□□ 0.69
ARFGAP1-223ENST00000550188 KDM6BO15054 1643 aa19.34■□□□□ 0.69
ARFGAP1-223ENST00000550188 CFAP43Q8NDM7 1665 aa19.33■□□□□ 0.68
ARFGAP1-223ENST00000550188 MAGI3Q5TCQ9 1506 aa19.32■□□□□ 0.68
ARFGAP1-223ENST00000550188 PLEKHD1A6NEE1 506 aa19.32■□□□□ 0.68
ARFGAP1-223ENST00000550188 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
ARFGAP1-223ENST00000550188 ATP1B4Q9UN42 357 aaPredicted RBP19.31■□□□□ 0.68
ARFGAP1-223ENST00000550188 ABCA9Q8IUA7 1624 aa19.29■□□□□ 0.68
ARFGAP1-223ENST00000550188 CASKIN1Q8WXD9 1431 aa19.26■□□□□ 0.67
ARFGAP1-223ENST00000550188 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
ARFGAP1-223ENST00000550188 PCF11O94913 1555 aaKnown RBP19.24■□□□□ 0.67
ARFGAP1-223ENST00000550188 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
ARFGAP1-223ENST00000550188 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
ARFGAP1-223ENST00000550188 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
ARFGAP1-223ENST00000550188 COL17A1Q9UMD9 1497 aaPredicted RBP19.22■□□□□ 0.67
ARFGAP1-223ENST00000550188 LOC105371045A0A1W2PR82 267 aa19.19■□□□□ 0.66
ARFGAP1-223ENST00000550188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.19■□□□□ 0.66
ARFGAP1-223ENST00000550188 PHLDB1Q86UU1 1377 aa19.18■□□□□ 0.66
ARFGAP1-223ENST00000550188 TROQ12816 1431 aaPredicted RBP19.17■□□□□ 0.66
ARFGAP1-223ENST00000550188 NEO1Q92859 1461 aa19.16■□□□□ 0.66
ARFGAP1-223ENST00000550188 TTC37Q6PGP7 1564 aa19.15■□□□□ 0.66
ARFGAP1-223ENST00000550188 ARAP3Q8WWN8 1544 aa19.15■□□□□ 0.66
ARFGAP1-223ENST00000550188 LRRIQ1Q96JM4 1722 aa19.14■□□□□ 0.65
ARFGAP1-223ENST00000550188 KIF14Q15058 1648 aa19.13■□□□□ 0.65
ARFGAP1-223ENST00000550188 FANCAO15360 1455 aa19.11■□□□□ 0.65
ARFGAP1-223ENST00000550188 PLCH2O75038 1416 aa19.09■□□□□ 0.65
ARFGAP1-223ENST00000550188 CFAP74Q9C0B2 1584 aa19.09■□□□□ 0.65
ARFGAP1-223ENST00000550188 AKNAQ7Z591 1439 aa19.07■□□□□ 0.64
ARFGAP1-223ENST00000550188 RAPGEF3O95398 923 aa19.03■□□□□ 0.64
ARFGAP1-223ENST00000550188 DENND4BO75064 1496 aaPredicted RBP19.03■□□□□ 0.64
ARFGAP1-223ENST00000550188 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.64
ARFGAP1-223ENST00000550188 EFCAB2Q5VUJ9 269 aa19.02■□□□□ 0.64
ARFGAP1-223ENST00000550188 MYO5CQ9NQX4 1742 aa19.02■□□□□ 0.63
ARFGAP1-223ENST00000550188 MTUS2Q5JR59 1369 aa19.01■□□□□ 0.63
ARFGAP1-223ENST00000550188 ADGRL1O94910 1474 aa19■□□□□ 0.63
ARFGAP1-223ENST00000550188 FRMPD1Q5SYB0 1578 aa19■□□□□ 0.63
ARFGAP1-223ENST00000550188 ARHGAP5Q13017 1502 aa19■□□□□ 0.63
ARFGAP1-223ENST00000550188 SCAPERQ9BY12 1400 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms