RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-223ENST00000550160 FBLN2P98095 1184 aa18.74■□□□□ 0.59
CNOT2-223ENST00000550160 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
CNOT2-223ENST00000550160 TNIKQ9UKE5 1360 aa18.73■□□□□ 0.59
CNOT2-223ENST00000550160 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
CNOT2-223ENST00000550160 ADRA2BP18089 450 aa18.7■□□□□ 0.58
CNOT2-223ENST00000550160 CTTNBP2Q8WZ74 1663 aa18.63■□□□□ 0.57
CNOT2-223ENST00000550160 CHD1O14646 1710 aa18.63■□□□□ 0.57
CNOT2-223ENST00000550160 NUP160Q12769 1436 aa18.61■□□□□ 0.57
CNOT2-223ENST00000550160 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
CNOT2-223ENST00000550160 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
CNOT2-223ENST00000550160 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
CNOT2-223ENST00000550160 IQGAP2Q13576 1575 aa18.57■□□□□ 0.56
CNOT2-223ENST00000550160 CLIP1P30622 1438 aa18.56■□□□□ 0.56
CNOT2-223ENST00000550160 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
CNOT2-223ENST00000550160 OSCARQ8IYS5 282 aa18.5■□□□□ 0.55
CNOT2-223ENST00000550160 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
CNOT2-223ENST00000550160 UGGT2Q9NYU1 1516 aa18.47■□□□□ 0.55
CNOT2-223ENST00000550160 CLASP1Q7Z460 1538 aa18.45■□□□□ 0.54
CNOT2-223ENST00000550160 JPH4Q96JJ6 628 aa18.45■□□□□ 0.54
CNOT2-223ENST00000550160 CARMIL2Q6F5E8 1435 aa18.43■□□□□ 0.54
CNOT2-223ENST00000550160 ARHGAP35Q9NRY4 1499 aa18.43■□□□□ 0.54
CNOT2-223ENST00000550160 SAMD9Q5K651 1589 aa18.41■□□□□ 0.54
CNOT2-223ENST00000550160 SHROOM2Q13796 1616 aa18.38■□□□□ 0.53
CNOT2-223ENST00000550160 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
CNOT2-223ENST00000550160 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
CNOT2-223ENST00000550160 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
CNOT2-223ENST00000550160 DISP1Q96F81 1524 aa18.36■□□□□ 0.53
CNOT2-223ENST00000550160 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
CNOT2-223ENST00000550160 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
CNOT2-223ENST00000550160 VPS8Q8N3P4 1428 aa18.34■□□□□ 0.53
CNOT2-223ENST00000550160 FMN1Q68DA7 1419 aa18.33■□□□□ 0.53
CNOT2-223ENST00000550160 PTPRGP23470 1445 aa18.24■□□□□ 0.51
CNOT2-223ENST00000550160 POTEDQ86YR6 584 aa18.24■□□□□ 0.51
CNOT2-223ENST00000550160 TTBK1Q5TCY1 1321 aaPredicted RBP18.23■□□□□ 0.51
CNOT2-223ENST00000550160 APLP2Q06481 763 aa18.22■□□□□ 0.51
CNOT2-223ENST00000550160 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
CNOT2-223ENST00000550160 CASKIN1Q8WXD9 1431 aa18.21■□□□□ 0.51
CNOT2-223ENST00000550160 ERCC6L2Q5T890 1561 aa18.21■□□□□ 0.51
CNOT2-223ENST00000550160 PCF11O94913 1555 aaKnown RBP18.19■□□□□ 0.5
CNOT2-223ENST00000550160 ATP1B4Q9UN42 357 aaPredicted RBP18.18■□□□□ 0.5
CNOT2-223ENST00000550160 HECW1Q76N89 1606 aa18.16■□□□□ 0.5
CNOT2-223ENST00000550160 ARHGEF11O15085 1522 aa18.15■□□□□ 0.5
CNOT2-223ENST00000550160 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
CNOT2-223ENST00000550160 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.49
CNOT2-223ENST00000550160 UACAQ9BZF9 1416 aa18.13■□□□□ 0.49
CNOT2-223ENST00000550160 CCDC18Q5T9S5 1454 aa18.12■□□□□ 0.49
CNOT2-223ENST00000550160 ABCA8O94911 1581 aa18.12■□□□□ 0.49
CNOT2-223ENST00000550160 MAP3K1Q13233 1512 aa18.09■□□□□ 0.49
CNOT2-223ENST00000550160 ABCC2Q92887 1545 aa18.08■□□□□ 0.48
CNOT2-223ENST00000550160 NUP153P49790 1475 aaKnown RBP18.07■□□□□ 0.48
CNOT2-223ENST00000550160 RIMBP3CA6NJZ7 1639 aa18.07■□□□□ 0.48
CNOT2-223ENST00000550160 RIMBP3BA6NNM3 1639 aa18.07■□□□□ 0.48
CNOT2-223ENST00000550160 RIMBP3Q9UFD9 1639 aa18.07■□□□□ 0.48
CNOT2-223ENST00000550160 EPRSP07814 1512 aaKnown RBP18.07■□□□□ 0.48
CNOT2-223ENST00000550160 UHRF1BP1LA0JNW5 1464 aa18.07■□□□□ 0.48
CNOT2-223ENST00000550160 PIAS4Q8N2W9 510 aaPredicted RBP18.06■□□□□ 0.48
CNOT2-223ENST00000550160 TIAM1Q13009 1591 aa18.05■□□□□ 0.48
CNOT2-223ENST00000550160 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
CNOT2-223ENST00000550160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
CNOT2-223ENST00000550160 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
CNOT2-223ENST00000550160 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
CNOT2-223ENST00000550160 ARID3CA6NKF2 412 aa18.01■□□□□ 0.47
CNOT2-223ENST00000550160 CDK13Q14004 1512 aaKnown RBP18.01■□□□□ 0.47
CNOT2-223ENST00000550160 MTUS2Q5JR59 1369 aa18.01■□□□□ 0.47
CNOT2-223ENST00000550160 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
CNOT2-223ENST00000550160 LRRC9Q6ZRR7 1453 aa17.98■□□□□ 0.47
CNOT2-223ENST00000550160 ADCY10Q96PN6 1610 aa17.98■□□□□ 0.47
CNOT2-223ENST00000550160 ATP10BO94823 1461 aa17.97■□□□□ 0.47
CNOT2-223ENST00000550160 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
CNOT2-223ENST00000550160 LRRIQ1Q96JM4 1722 aa17.97■□□□□ 0.47
CNOT2-223ENST00000550160 KDM5BQ9UGL1 1544 aa17.97■□□□□ 0.47
CNOT2-223ENST00000550160 EHBP1L1Q8N3D4 1523 aa17.96■□□□□ 0.47
CNOT2-223ENST00000550160 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
CNOT2-223ENST00000550160 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
CNOT2-223ENST00000550160 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
CNOT2-223ENST00000550160 ZCCHC11Q5TAX3 1644 aaKnown RBP17.91■□□□□ 0.46
CNOT2-223ENST00000550160 TROQ12816 1431 aaPredicted RBP17.9■□□□□ 0.46
CNOT2-223ENST00000550160 DNAJC5Q9H3Z4 198 aa17.9■□□□□ 0.46
CNOT2-223ENST00000550160 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
CNOT2-223ENST00000550160 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
CNOT2-223ENST00000550160 KIF14Q15058 1648 aa17.83■□□□□ 0.45
CNOT2-223ENST00000550160 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.45
CNOT2-223ENST00000550160 NCOA2Q15596 1464 aa17.82■□□□□ 0.44
CNOT2-223ENST00000550160 ASXL2Q76L83 1435 aa17.82■□□□□ 0.44
CNOT2-223ENST00000550160 MAPKBP1O60336 1514 aa17.79■□□□□ 0.44
CNOT2-223ENST00000550160 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
CNOT2-223ENST00000550160 TRIM26Q12899 539 aaPredicted RBP17.77■□□□□ 0.44
CNOT2-223ENST00000550160 KCNH8Q96L42 1107 aa17.77■□□□□ 0.44
CNOT2-223ENST00000550160 PHLDB1Q86UU1 1377 aa17.77■□□□□ 0.43
CNOT2-223ENST00000550160 MYOM3Q5VTT5 1437 aa17.76■□□□□ 0.43
CNOT2-223ENST00000550160 ABCC10Q5T3U5 1492 aa17.73■□□□□ 0.43
CNOT2-223ENST00000550160 ITSN2Q9NZM3 1697 aa17.72■□□□□ 0.43
CNOT2-223ENST00000550160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.71■□□□□ 0.433e-8■■■□□ 17.7
CNOT2-223ENST00000550160 FGD6Q6ZV73 1430 aa17.71■□□□□ 0.43
CNOT2-223ENST00000550160 MIA2Q96PC5 1412 aa17.71■□□□□ 0.43
CNOT2-223ENST00000550160 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.43
CNOT2-223ENST00000550160 GPATCH8Q9UKJ3 1502 aaKnown RBP17.68■□□□□ 0.42
CNOT2-223ENST00000550160 TTC37Q6PGP7 1564 aa17.68■□□□□ 0.42
CNOT2-223ENST00000550160 CFDP1Q9UEE9 299 aaPredicted RBP17.68■□□□□ 0.42
CNOT2-223ENST00000550160 ABCA9Q8IUA7 1624 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms