RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
RNF41-205ENST00000548225 JPH4Q96JJ6 628 aa25.71■■□□□ 1.71
RNF41-205ENST00000548225 RAPGEF2Q9Y4G8 1499 aa25.7■■□□□ 1.7
RNF41-205ENST00000548225 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
RNF41-205ENST00000548225 IQGAP2Q13576 1575 aa25.6■■□□□ 1.69
RNF41-205ENST00000548225 EEA1Q15075 1411 aa25.58■■□□□ 1.69
RNF41-205ENST00000548225 PRXQ9BXM0 1461 aa25.58■■□□□ 1.69
RNF41-205ENST00000548225 CTTNBP2Q8WZ74 1663 aa25.49■■□□□ 1.67
RNF41-205ENST00000548225 CARMIL2Q6F5E8 1435 aa25.49■■□□□ 1.67
RNF41-205ENST00000548225 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
RNF41-205ENST00000548225 CSRNP3Q8WYN3 585 aa25.48■■□□□ 1.67
RNF41-205ENST00000548225 UGGT2Q9NYU1 1516 aa25.46■■□□□ 1.67
RNF41-205ENST00000548225 DISP1Q96F81 1524 aa25.4■■□□□ 1.66
RNF41-205ENST00000548225 TNIKQ9UKE5 1360 aa25.4■■□□□ 1.66
RNF41-205ENST00000548225 PTPRGP23470 1445 aa25.37■■□□□ 1.65
RNF41-205ENST00000548225 TRHP20396 242 aaPredicted RBP25.36■■□□□ 1.65
RNF41-205ENST00000548225 KIAA0556O60303 1618 aa25.35■■□□□ 1.65
RNF41-205ENST00000548225 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
RNF41-205ENST00000548225 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
RNF41-205ENST00000548225 KIF21BO75037 1637 aa25.3■■□□□ 1.64
RNF41-205ENST00000548225 FAM9AQ8IZU1 332 aaPredicted RBP25.28■■□□□ 1.64
RNF41-205ENST00000548225 NPM1P06748 294 aaKnown RBP eCLIP25.26■■□□□ 1.63
RNF41-205ENST00000548225 MAPKBP1O60336 1514 aa25.25■■□□□ 1.63
RNF41-205ENST00000548225 UHRF1BP1LA0JNW5 1464 aa25.23■■□□□ 1.63
RNF41-205ENST00000548225 UACAQ9BZF9 1416 aa25.22■■□□□ 1.63
RNF41-205ENST00000548225 TTBK1Q5TCY1 1321 aaPredicted RBP25.2■■□□□ 1.62
RNF41-205ENST00000548225 ABCC2Q92887 1545 aa25.19■■□□□ 1.62
RNF41-205ENST00000548225 SAMD9Q5K651 1589 aa25.15■■□□□ 1.62
RNF41-205ENST00000548225 KIF13AQ9H1H9 1805 aa25.12■■□□□ 1.61
RNF41-205ENST00000548225 ABCC10Q5T3U5 1492 aa25.11■■□□□ 1.61
RNF41-205ENST00000548225 KDM5BQ9UGL1 1544 aa25.1■■□□□ 1.61
RNF41-205ENST00000548225 ABCA8O94911 1581 aa25.08■■□□□ 1.61
RNF41-205ENST00000548225 DIP2BQ9P265 1576 aa25.08■■□□□ 1.61
RNF41-205ENST00000548225 PLB1Q6P1J6 1458 aa25.07■■□□□ 1.6
RNF41-205ENST00000548225 EFCAB5A4FU69 1503 aa25.05■■□□□ 1.6
RNF41-205ENST00000548225 ZCCHC11Q5TAX3 1644 aaKnown RBP25.04■■□□□ 1.6
RNF41-205ENST00000548225 ASXL2Q76L83 1435 aa25.02■■□□□ 1.6
RNF41-205ENST00000548225 FAM69CQ0P6D2 419 aa25.01■■□□□ 1.59
RNF41-205ENST00000548225 UBTFP17480 764 aaKnown RBP25■■□□□ 1.59
RNF41-205ENST00000548225 P3H3Q8IVL6 736 aa25■■□□□ 1.59
RNF41-205ENST00000548225 GLI2P10070 1586 aa24.94■■□□□ 1.58
RNF41-205ENST00000548225 RANGAP1P46060 587 aaPredicted RBP24.94■■□□□ 1.58
RNF41-205ENST00000548225 FHOD3Q2V2M9 1422 aa24.94■■□□□ 1.58
RNF41-205ENST00000548225 RAPGEF6Q8TEU7 1601 aa24.93■■□□□ 1.58
RNF41-205ENST00000548225 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
RNF41-205ENST00000548225 WDR7Q9Y4E6 1490 aa24.9■■□□□ 1.58
RNF41-205ENST00000548225 EPRSP07814 1512 aaKnown RBP24.88■■□□□ 1.57
RNF41-205ENST00000548225 ATP10BO94823 1461 aa24.83■■□□□ 1.57
RNF41-205ENST00000548225 ARHGAP35Q9NRY4 1499 aa24.83■■□□□ 1.56
RNF41-205ENST00000548225 TSPOAP1O95153 1857 aa24.81■■□□□ 1.56
RNF41-205ENST00000548225 MAP3K4Q9Y6R4 1608 aa24.81■■□□□ 1.56
RNF41-205ENST00000548225 NUP153P49790 1475 aaKnown RBP24.81■■□□□ 1.56
RNF41-205ENST00000548225 FMN1Q68DA7 1419 aa24.78■■□□□ 1.56
RNF41-205ENST00000548225 PPRC1Q5VV67 1664 aaKnown RBP24.76■■□□□ 1.55
RNF41-205ENST00000548225 CFAP43Q8NDM7 1665 aa24.73■■□□□ 1.55
RNF41-205ENST00000548225 ARID3CA6NKF2 412 aa24.73■■□□□ 1.55
RNF41-205ENST00000548225 TEX14Q8IWB6 1497 aa24.72■■□□□ 1.55
RNF41-205ENST00000548225 KDM6BO15054 1643 aa24.71■■□□□ 1.55
RNF41-205ENST00000548225 HECW1Q76N89 1606 aa24.69■■□□□ 1.54
RNF41-205ENST00000548225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
RNF41-205ENST00000548225 HNRNPUL2Q1KMD3 747 aaKnown RBP24.68■■□□□ 1.54
RNF41-205ENST00000548225 KCNH8Q96L42 1107 aa24.68■■□□□ 1.54
RNF41-205ENST00000548225 CD109Q6YHK3 1445 aa24.66■■□□□ 1.54
RNF41-205ENST00000548225 MAGI3Q5TCQ9 1506 aa24.66■■□□□ 1.54
RNF41-205ENST00000548225 ABCA9Q8IUA7 1624 aa24.64■■□□□ 1.54
RNF41-205ENST00000548225 CLIP1P30622 1438 aa24.64■■□□□ 1.54
RNF41-205ENST00000548225 PLEKHD1A6NEE1 506 aa24.61■■□□□ 1.53
RNF41-205ENST00000548225 CDK13Q14004 1512 aaKnown RBP24.6■■□□□ 1.53
RNF41-205ENST00000548225 CASKIN1Q8WXD9 1431 aa24.56■■□□□ 1.52
RNF41-205ENST00000548225 PCF11O94913 1555 aaKnown RBP24.55■■□□□ 1.52
RNF41-205ENST00000548225 ATP1B4Q9UN42 357 aaPredicted RBP24.54■■□□□ 1.52
RNF41-205ENST00000548225 FYCO1Q9BQS8 1478 aa24.52■■□□□ 1.52
RNF41-205ENST00000548225 CDK11AQ9UQ88 783 aaPredicted RBP24.52■■□□□ 1.52
RNF41-205ENST00000548225 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
RNF41-205ENST00000548225 LRRIQ1Q96JM4 1722 aa24.5■■□□□ 1.51
RNF41-205ENST00000548225 CEP162Q5TB80 1403 aa24.5■■□□□ 1.51
RNF41-205ENST00000548225 COL17A1Q9UMD9 1497 aaPredicted RBP24.5■■□□□ 1.51
RNF41-205ENST00000548225 PHLDB1Q86UU1 1377 aa24.49■■□□□ 1.51
RNF41-205ENST00000548225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.48■■□□□ 1.51
RNF41-205ENST00000548225 NEO1Q92859 1461 aa24.46■■□□□ 1.51
RNF41-205ENST00000548225 ARAP3Q8WWN8 1544 aa24.45■■□□□ 1.5
RNF41-205ENST00000548225 TROQ12816 1431 aaPredicted RBP24.44■■□□□ 1.5
RNF41-205ENST00000548225 TTC37Q6PGP7 1564 aa24.44■■□□□ 1.5
RNF41-205ENST00000548225 KIF14Q15058 1648 aa24.42■■□□□ 1.5
RNF41-205ENST00000548225 CFAP74Q9C0B2 1584 aa24.42■■□□□ 1.5
RNF41-205ENST00000548225 LOC105371045A0A1W2PR82 267 aa24.38■■□□□ 1.49
RNF41-205ENST00000548225 FANCAO15360 1455 aa24.36■■□□□ 1.49
RNF41-205ENST00000548225 MYO5CQ9NQX4 1742 aa24.35■■□□□ 1.49
RNF41-205ENST00000548225 PLCH2O75038 1416 aa24.34■■□□□ 1.49
RNF41-205ENST00000548225 AKNAQ7Z591 1439 aa24.31■■□□□ 1.48
RNF41-205ENST00000548225 DENND4BO75064 1496 aaPredicted RBP24.26■■□□□ 1.47
RNF41-205ENST00000548225 FRMPD1Q5SYB0 1578 aa24.25■■□□□ 1.47
RNF41-205ENST00000548225 VPS8Q8N3P4 1428 aa24.24■■□□□ 1.47
RNF41-205ENST00000548225 RICTORQ6R327 1708 aa24.24■■□□□ 1.47
RNF41-205ENST00000548225 EFCAB2Q5VUJ9 269 aa24.23■■□□□ 1.47
RNF41-205ENST00000548225 PREX2Q70Z35 1606 aa24.22■■□□□ 1.47
RNF41-205ENST00000548225 ARHGAP5Q13017 1502 aa24.22■■□□□ 1.47
RNF41-205ENST00000548225 ADGRL1O94910 1474 aa24.22■■□□□ 1.47
RNF41-205ENST00000548225 RAPGEF3O95398 923 aa24.22■■□□□ 1.47
RNF41-205ENST00000548225 MTUS2Q5JR59 1369 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms