RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 EEA1Q15075 1411 aa28.76■■■□□ 2.2
HDAC7-227ENST00000548080 PRXQ9BXM0 1461 aa28.76■■■□□ 2.19
HDAC7-227ENST00000548080 ERCC6L2Q5T890 1561 aa28.75■■■□□ 2.19
HDAC7-227ENST00000548080 SHROOM2Q13796 1616 aa28.73■■■□□ 2.19
HDAC7-227ENST00000548080 KIAA0586Q9BVV6 1533 aa28.71■■■□□ 2.19
HDAC7-227ENST00000548080 ARAP1Q96P48 1450 aa28.7■■■□□ 2.18
HDAC7-227ENST00000548080 JPH4Q96JJ6 628 aa28.67■■■□□ 2.18
HDAC7-227ENST00000548080 PRG4Q92954 1404 aaPredicted RBP28.65■■■□□ 2.18
HDAC7-227ENST00000548080 CYB5RLQ6IPT4 315 aa28.65■■■□□ 2.18
HDAC7-227ENST00000548080 EHMT2Q96KQ7 1210 aa28.63■■■□□ 2.17
HDAC7-227ENST00000548080 IQGAP2Q13576 1575 aa28.63■■■□□ 2.17
HDAC7-227ENST00000548080 CTTNBP2Q8WZ74 1663 aa28.61■■■□□ 2.17
HDAC7-227ENST00000548080 KIF21BO75037 1637 aa28.54■■■□□ 2.16
HDAC7-227ENST00000548080 TTBK1Q5TCY1 1321 aaPredicted RBP28.45■■■□□ 2.14
HDAC7-227ENST00000548080 UGGT2Q9NYU1 1516 aa28.44■■■□□ 2.14
HDAC7-227ENST00000548080 DISP1Q96F81 1524 aa28.42■■■□□ 2.14
HDAC7-227ENST00000548080 GOLGA3Q08378 1498 aa28.39■■■□□ 2.14
HDAC7-227ENST00000548080 CARMIL2Q6F5E8 1435 aa28.39■■■□□ 2.14
HDAC7-227ENST00000548080 RANGAP1P46060 587 aaPredicted RBP28.39■■■□□ 2.13
HDAC7-227ENST00000548080 KIAA0556O60303 1618 aa28.37■■■□□ 2.13
HDAC7-227ENST00000548080 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
HDAC7-227ENST00000548080 TNIKQ9UKE5 1360 aa28.31■■■□□ 2.12
HDAC7-227ENST00000548080 PTPRGP23470 1445 aa28.29■■■□□ 2.12
HDAC7-227ENST00000548080 P3H3Q8IVL6 736 aa28.28■■■□□ 2.12
HDAC7-227ENST00000548080 ADCY10Q96PN6 1610 aa28.22■■■□□ 2.11
HDAC7-227ENST00000548080 SAMD9Q5K651 1589 aa28.21■■■□□ 2.11
HDAC7-227ENST00000548080 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.09
HDAC7-227ENST00000548080 FHOD3Q2V2M9 1422 aa28.13■■■□□ 2.09
HDAC7-227ENST00000548080 UACAQ9BZF9 1416 aa28.1■■■□□ 2.09
HDAC7-227ENST00000548080 PLB1Q6P1J6 1458 aa28.09■■■□□ 2.09
HDAC7-227ENST00000548080 EFCAB5A4FU69 1503 aa28.07■■■□□ 2.08
HDAC7-227ENST00000548080 ABCC2Q92887 1545 aa28.06■■■□□ 2.08
HDAC7-227ENST00000548080 ARHGAP35Q9NRY4 1499 aa28.03■■■□□ 2.08
HDAC7-227ENST00000548080 TRHP20396 242 aaPredicted RBP28.03■■■□□ 2.08
HDAC7-227ENST00000548080 ABCA8O94911 1581 aa28.03■■■□□ 2.08
HDAC7-227ENST00000548080 NPM1P06748 294 aaKnown RBP eCLIP28.02■■■□□ 2.08
HDAC7-227ENST00000548080 UHRF1BP1LA0JNW5 1464 aa28.02■■■□□ 2.08
HDAC7-227ENST00000548080 ARID3CA6NKF2 412 aa27.97■■■□□ 2.07
HDAC7-227ENST00000548080 ZCCHC11Q5TAX3 1644 aaKnown RBP27.95■■■□□ 2.06
HDAC7-227ENST00000548080 RAPGEF6Q8TEU7 1601 aa27.94■■■□□ 2.06
HDAC7-227ENST00000548080 KDM5BQ9UGL1 1544 aa27.92■■■□□ 2.06
HDAC7-227ENST00000548080 CLIP1P30622 1438 aa27.91■■■□□ 2.06
HDAC7-227ENST00000548080 MAPKBP1O60336 1514 aa27.91■■■□□ 2.06
HDAC7-227ENST00000548080 ASXL2Q76L83 1435 aa27.86■■■□□ 2.05
HDAC7-227ENST00000548080 CEP162Q5TB80 1403 aa27.84■■■□□ 2.05
HDAC7-227ENST00000548080 KIF13AQ9H1H9 1805 aa27.84■■■□□ 2.05
HDAC7-227ENST00000548080 NUP153P49790 1475 aaKnown RBP27.83■■■□□ 2.04
HDAC7-227ENST00000548080 ATP10BO94823 1461 aa27.8■■■□□ 2.04
HDAC7-227ENST00000548080 FMN1Q68DA7 1419 aa27.8■■■□□ 2.04
HDAC7-227ENST00000548080 DIP2BQ9P265 1576 aa27.79■■■□□ 2.04
HDAC7-227ENST00000548080 ATP1B4Q9UN42 357 aaPredicted RBP27.79■■■□□ 2.04
HDAC7-227ENST00000548080 ABCC10Q5T3U5 1492 aa27.78■■■□□ 2.04
HDAC7-227ENST00000548080 FAM69CQ0P6D2 419 aa27.77■■■□□ 2.04
HDAC7-227ENST00000548080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.76■■■□□ 2.03
HDAC7-227ENST00000548080 HNRNPUL2Q1KMD3 747 aaKnown RBP27.76■■■□□ 2.03
HDAC7-227ENST00000548080 PCF11O94913 1555 aaKnown RBP27.73■■■□□ 2.03
HDAC7-227ENST00000548080 CDK13Q14004 1512 aaKnown RBP27.72■■■□□ 2.03
HDAC7-227ENST00000548080 WDR7Q9Y4E6 1490 aa27.71■■■□□ 2.03
HDAC7-227ENST00000548080 HECW1Q76N89 1606 aa27.71■■■□□ 2.03
HDAC7-227ENST00000548080 EPRSP07814 1512 aaKnown RBP27.68■■■□□ 2.02
HDAC7-227ENST00000548080 KCNH8Q96L42 1107 aa27.68■■■□□ 2.02
HDAC7-227ENST00000548080 LRRIQ1Q96JM4 1722 aa27.68■■■□□ 2.02
HDAC7-227ENST00000548080 TSPOAP1O95153 1857 aa27.66■■■□□ 2.02
HDAC7-227ENST00000548080 CASKIN1Q8WXD9 1431 aa27.63■■■□□ 2.01
HDAC7-227ENST00000548080 GLI2P10070 1586 aa27.6■■■□□ 2.01
HDAC7-227ENST00000548080 FYCO1Q9BQS8 1478 aa27.58■■■□□ 2.01
HDAC7-227ENST00000548080 MAP3K4Q9Y6R4 1608 aa27.54■■■□□ 2
HDAC7-227ENST00000548080 PLEKHD1A6NEE1 506 aa27.53■■■□□ 2
HDAC7-227ENST00000548080 PPRC1Q5VV67 1664 aaKnown RBP27.52■■■□□ 2
HDAC7-227ENST00000548080 CCDC18Q5T9S5 1454 aa27.48■■□□□ 1.99
HDAC7-227ENST00000548080 CFAP43Q8NDM7 1665 aa27.47■■□□□ 1.99
HDAC7-227ENST00000548080 VPS8Q8N3P4 1428 aa27.46■■□□□ 1.99
HDAC7-227ENST00000548080 CD109Q6YHK3 1445 aa27.45■■□□□ 1.98
HDAC7-227ENST00000548080 ABCA9Q8IUA7 1624 aa27.45■■□□□ 1.98
HDAC7-227ENST00000548080 MAGI3Q5TCQ9 1506 aa27.44■■□□□ 1.98
HDAC7-227ENST00000548080 CDK11AQ9UQ88 783 aaPredicted RBP27.42■■□□□ 1.98
HDAC7-227ENST00000548080 KIF14Q15058 1648 aa27.41■■□□□ 1.98
HDAC7-227ENST00000548080 TTC37Q6PGP7 1564 aa27.41■■□□□ 1.98
HDAC7-227ENST00000548080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.4■■□□□ 1.982e-6■■■□□ 16.6
HDAC7-227ENST00000548080 TROQ12816 1431 aaPredicted RBP27.39■■□□□ 1.98
HDAC7-227ENST00000548080 TEX14Q8IWB6 1497 aa27.33■■□□□ 1.97
HDAC7-227ENST00000548080 KDM6BO15054 1643 aa27.32■■□□□ 1.96
HDAC7-227ENST00000548080 TIAM1Q13009 1591 aa27.28■■□□□ 1.96
HDAC7-227ENST00000548080 MTUS2Q5JR59 1369 aa27.28■■□□□ 1.96
HDAC7-227ENST00000548080 COL17A1Q9UMD9 1497 aaPredicted RBP27.25■■□□□ 1.95
HDAC7-227ENST00000548080 MYO5CQ9NQX4 1742 aa27.24■■□□□ 1.95
HDAC7-227ENST00000548080 EHBP1L1Q8N3D4 1523 aa27.21■■□□□ 1.95
HDAC7-227ENST00000548080 FANCAO15360 1455 aa27.18■■□□□ 1.94
HDAC7-227ENST00000548080 PLCH2O75038 1416 aa27.18■■□□□ 1.94
HDAC7-227ENST00000548080 CDC42BPAQ5VT25 1732 aa27.15■■□□□ 1.94
HDAC7-227ENST00000548080 CDC42BPBQ9Y5S2 1711 aa27.15■■□□□ 1.94
HDAC7-227ENST00000548080 NEO1Q92859 1461 aa27.15■■□□□ 1.94
HDAC7-227ENST00000548080 KANK4Q5T7N3 995 aaPredicted RBP27.15■■□□□ 1.94
HDAC7-227ENST00000548080 ARHGAP5Q13017 1502 aa27.14■■□□□ 1.94
HDAC7-227ENST00000548080 LRRC9Q6ZRR7 1453 aa27.14■■□□□ 1.93
HDAC7-227ENST00000548080 PREX2Q70Z35 1606 aa27.14■■□□□ 1.93
HDAC7-227ENST00000548080 CFAP74Q9C0B2 1584 aa27.13■■□□□ 1.93
HDAC7-227ENST00000548080 AKNAQ7Z591 1439 aa27.12■■□□□ 1.93
HDAC7-227ENST00000548080 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
HDAC7-227ENST00000548080 APLP2Q06481 763 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms