RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 GRIN2AQ12879 1464 aa19.53■□□□□ 0.72
RAB5B-204ENST00000548068 VPS8Q8N3P4 1428 aa19.5■□□□□ 0.71
RAB5B-204ENST00000548068 IQGAP2Q13576 1575 aa19.49■□□□□ 0.71
RAB5B-204ENST00000548068 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
RAB5B-204ENST00000548068 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
RAB5B-204ENST00000548068 RANGAP1P46060 587 aaPredicted RBP19.45■□□□□ 0.7
RAB5B-204ENST00000548068 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
RAB5B-204ENST00000548068 SAMD9Q5K651 1589 aa19.43■□□□□ 0.7
RAB5B-204ENST00000548068 KIAA0586Q9BVV6 1533 aa19.42■□□□□ 0.7
RAB5B-204ENST00000548068 CHD1O14646 1710 aa19.39■□□□□ 0.7
RAB5B-204ENST00000548068 CEP170Q5SW79 1584 aa19.39■□□□□ 0.69
RAB5B-204ENST00000548068 NUP160Q12769 1436 aa19.38■□□□□ 0.69
RAB5B-204ENST00000548068 UGGT2Q9NYU1 1516 aa19.37■□□□□ 0.69
RAB5B-204ENST00000548068 FBLN2P98095 1184 aa19.35■□□□□ 0.69
RAB5B-204ENST00000548068 FMN1Q68DA7 1419 aa19.31■□□□□ 0.68
RAB5B-204ENST00000548068 APLP2Q06481 763 aa19.3■□□□□ 0.68
RAB5B-204ENST00000548068 FHOD3Q2V2M9 1422 aa19.3■□□□□ 0.68
RAB5B-204ENST00000548068 KIAA0556O60303 1618 aa19.27■□□□□ 0.68
RAB5B-204ENST00000548068 FYCO1Q9BQS8 1478 aa19.27■□□□□ 0.67
RAB5B-204ENST00000548068 PCF11O94913 1555 aaKnown RBP19.26■□□□□ 0.67
RAB5B-204ENST00000548068 MAP3K1Q13233 1512 aa19.24■□□□□ 0.67
RAB5B-204ENST00000548068 P3H3Q8IVL6 736 aa19.23■□□□□ 0.67
RAB5B-204ENST00000548068 CASKIN1Q8WXD9 1431 aa19.23■□□□□ 0.67
RAB5B-204ENST00000548068 CARMIL2Q6F5E8 1435 aa19.22■□□□□ 0.67
RAB5B-204ENST00000548068 DISP1Q96F81 1524 aa19.21■□□□□ 0.67
RAB5B-204ENST00000548068 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
RAB5B-204ENST00000548068 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
RAB5B-204ENST00000548068 SHROOM2Q13796 1616 aa19.18■□□□□ 0.66
RAB5B-204ENST00000548068 TIAM1Q13009 1591 aa19.18■□□□□ 0.66
RAB5B-204ENST00000548068 HECW1Q76N89 1606 aa19.17■□□□□ 0.66
RAB5B-204ENST00000548068 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
RAB5B-204ENST00000548068 JPH4Q96JJ6 628 aa19.15■□□□□ 0.66
RAB5B-204ENST00000548068 CCDC18Q5T9S5 1454 aa19.11■□□□□ 0.65
RAB5B-204ENST00000548068 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
RAB5B-204ENST00000548068 RAPGEF6Q8TEU7 1601 aa19.09■□□□□ 0.65
RAB5B-204ENST00000548068 PRG4Q92954 1404 aaPredicted RBP19.08■□□□□ 0.65
RAB5B-204ENST00000548068 PCGF6Q9BYE7 350 aa19.07■□□□□ 0.64
RAB5B-204ENST00000548068 LRRIQ1Q96JM4 1722 aa19.06■□□□□ 0.64
RAB5B-204ENST00000548068 LRRC9Q6ZRR7 1453 aa19.05■□□□□ 0.64
RAB5B-204ENST00000548068 ATP1B4Q9UN42 357 aaPredicted RBP19.05■□□□□ 0.64
RAB5B-204ENST00000548068 TTBK1Q5TCY1 1321 aaPredicted RBP19.01■□□□□ 0.63
RAB5B-204ENST00000548068 EPRSP07814 1512 aaKnown RBP19■□□□□ 0.63
RAB5B-204ENST00000548068 EHBP1L1Q8N3D4 1523 aa19■□□□□ 0.63
RAB5B-204ENST00000548068 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
RAB5B-204ENST00000548068 ABCA8O94911 1581 aa18.98■□□□□ 0.63
RAB5B-204ENST00000548068 PTPRGP23470 1445 aa18.97■□□□□ 0.63
RAB5B-204ENST00000548068 NUP153P49790 1475 aaKnown RBP18.97■□□□□ 0.63
RAB5B-204ENST00000548068 MTUS2Q5JR59 1369 aa18.95■□□□□ 0.62
RAB5B-204ENST00000548068 OSCARQ8IYS5 282 aa18.95■□□□□ 0.62
RAB5B-204ENST00000548068 SUPT6HQ7KZ85 1726 aaKnown RBP18.94■□□□□ 0.62
RAB5B-204ENST00000548068 PLB1Q6P1J6 1458 aa18.94■□□□□ 0.62
RAB5B-204ENST00000548068 CDK13Q14004 1512 aaKnown RBP18.93■□□□□ 0.62
RAB5B-204ENST00000548068 ERCC6L2Q5T890 1561 aa18.92■□□□□ 0.62
RAB5B-204ENST00000548068 CDK11AQ9UQ88 783 aaPredicted RBP18.88■□□□□ 0.61
RAB5B-204ENST00000548068 UACAQ9BZF9 1416 aa18.88■□□□□ 0.61
RAB5B-204ENST00000548068 RRBP1Q9P2E9 1410 aaKnown RBP18.88■□□□□ 0.61
RAB5B-204ENST00000548068 ABCC2Q92887 1545 aa18.86■□□□□ 0.61
RAB5B-204ENST00000548068 MAGI3Q5TCQ9 1506 aa18.85■□□□□ 0.61
RAB5B-204ENST00000548068 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
RAB5B-204ENST00000548068 ARHGEF11O15085 1522 aa18.83■□□□□ 0.6
RAB5B-204ENST00000548068 UHRF1BP1LA0JNW5 1464 aa18.83■□□□□ 0.6
RAB5B-204ENST00000548068 ADCY10Q96PN6 1610 aa18.82■□□□□ 0.6
RAB5B-204ENST00000548068 CCNB3Q8WWL7 1395 aa18.81■□□□□ 0.6
RAB5B-204ENST00000548068 PHLDB1Q86UU1 1377 aa18.81■□□□□ 0.6
RAB5B-204ENST00000548068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
RAB5B-204ENST00000548068 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
RAB5B-204ENST00000548068 TROQ12816 1431 aaPredicted RBP18.8■□□□□ 0.6
RAB5B-204ENST00000548068 ATP10BO94823 1461 aa18.79■□□□□ 0.6
RAB5B-204ENST00000548068 MYOM3Q5VTT5 1437 aa18.77■□□□□ 0.6
RAB5B-204ENST00000548068 ARID3CA6NKF2 412 aa18.77■□□□□ 0.6
RAB5B-204ENST00000548068 KIF14Q15058 1648 aa18.76■□□□□ 0.59
RAB5B-204ENST00000548068 FGD6Q6ZV73 1430 aa18.75■□□□□ 0.59
RAB5B-204ENST00000548068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.75■□□□□ 0.59
RAB5B-204ENST00000548068 ITSN2Q9NZM3 1697 aa18.75■□□□□ 0.59
RAB5B-204ENST00000548068 PLEKHD1A6NEE1 506 aa18.73■□□□□ 0.59
RAB5B-204ENST00000548068 ZCCHC11Q5TAX3 1644 aaKnown RBP18.73■□□□□ 0.59
RAB5B-204ENST00000548068 KDM5BQ9UGL1 1544 aa18.72■□□□□ 0.59
RAB5B-204ENST00000548068 MIA2Q96PC5 1412 aa18.7■□□□□ 0.58
RAB5B-204ENST00000548068 PTPN23Q9H3S7 1636 aa18.7■□□□□ 0.58
RAB5B-204ENST00000548068 TCOF1Q13428 1488 aaKnown RBP18.67■□□□□ 0.58
RAB5B-204ENST00000548068 FAM50AQ14320 339 aaKnown RBP18.65■□□□□ 0.58
RAB5B-204ENST00000548068 ABCC10Q5T3U5 1492 aa18.62■□□□□ 0.57
RAB5B-204ENST00000548068 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
RAB5B-204ENST00000548068 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
RAB5B-204ENST00000548068 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
RAB5B-204ENST00000548068 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
RAB5B-204ENST00000548068 GPATCH8Q9UKJ3 1502 aaKnown RBP18.59■□□□□ 0.57
RAB5B-204ENST00000548068 PREX2Q70Z35 1606 aa18.58■□□□□ 0.56
RAB5B-204ENST00000548068 MYO5CQ9NQX4 1742 aa18.57■□□□□ 0.56
RAB5B-204ENST00000548068 WDR7Q9Y4E6 1490 aa18.56■□□□□ 0.56
RAB5B-204ENST00000548068 TTC37Q6PGP7 1564 aa18.55■□□□□ 0.56
RAB5B-204ENST00000548068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.56
RAB5B-204ENST00000548068 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
RAB5B-204ENST00000548068 CAMSAP2Q08AD1 1489 aa18.53■□□□□ 0.56
RAB5B-204ENST00000548068 DNMT1P26358 1616 aaKnown RBP18.53■□□□□ 0.56
RAB5B-204ENST00000548068 ITGAEP38570 1179 aa18.53■□□□□ 0.56
RAB5B-204ENST00000548068 CFDP1Q9UEE9 299 aaPredicted RBP18.53■□□□□ 0.56
RAB5B-204ENST00000548068 CDC42BPBQ9Y5S2 1711 aa18.52■□□□□ 0.55
RAB5B-204ENST00000548068 HRCP23327 699 aa18.49■□□□□ 0.55
RAB5B-204ENST00000548068 ARAP3Q8WWN8 1544 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 330.6 ms