RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
RNF41-203ENST00000547967 ZEB1P37275 1124 aaPredicted RBP17.92■□□□□ 0.46
RNF41-203ENST00000547967 WDR62O43379 1518 aa17.9■□□□□ 0.46
RNF41-203ENST00000547967 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
RNF41-203ENST00000547967 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
RNF41-203ENST00000547967 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
RNF41-203ENST00000547967 CTTNBP2Q8WZ74 1663 aa17.85■□□□□ 0.45
RNF41-203ENST00000547967 PBRM1Q86U86 1689 aa17.83■□□□□ 0.45
RNF41-203ENST00000547967 GRIN2BQ13224 1484 aa17.83■□□□□ 0.44
RNF41-203ENST00000547967 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
RNF41-203ENST00000547967 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
RNF41-203ENST00000547967 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
RNF41-203ENST00000547967 PCF11O94913 1555 aaKnown RBP17.76■□□□□ 0.43
RNF41-203ENST00000547967 ADAMTS12P58397 1594 aa17.76■□□□□ 0.43
RNF41-203ENST00000547967 TIAM1Q13009 1591 aa17.74■□□□□ 0.43
RNF41-203ENST00000547967 SNAPC4Q5SXM2 1469 aa17.73■□□□□ 0.43
RNF41-203ENST00000547967 FBLN2P98095 1184 aa17.73■□□□□ 0.43
RNF41-203ENST00000547967 EIF4G3O43432 1585 aaKnown RBP17.72■□□□□ 0.43
RNF41-203ENST00000547967 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
RNF41-203ENST00000547967 ITGAEP38570 1179 aa17.72■□□□□ 0.43
RNF41-203ENST00000547967 LRRC9Q6ZRR7 1453 aa17.71■□□□□ 0.43
RNF41-203ENST00000547967 CASKIN1Q8WXD9 1431 aa17.7■□□□□ 0.42
RNF41-203ENST00000547967 CHMP7Q8WUX9 453 aaPredicted RBP17.69■□□□□ 0.42
RNF41-203ENST00000547967 FYCO1Q9BQS8 1478 aa17.69■□□□□ 0.42
RNF41-203ENST00000547967 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
RNF41-203ENST00000547967 SAMD9Q5K651 1589 aa17.68■□□□□ 0.42
RNF41-203ENST00000547967 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
RNF41-203ENST00000547967 RRBP1Q9P2E9 1410 aaKnown RBP17.67■□□□□ 0.42
RNF41-203ENST00000547967 IQGAP2Q13576 1575 aa17.66■□□□□ 0.42
RNF41-203ENST00000547967 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
RNF41-203ENST00000547967 GRIN2AQ12879 1464 aa17.63■□□□□ 0.41
RNF41-203ENST00000547967 CFAP43Q8NDM7 1665 aa17.61■□□□□ 0.41
RNF41-203ENST00000547967 ARID3CA6NKF2 412 aa17.61■□□□□ 0.41
RNF41-203ENST00000547967 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
RNF41-203ENST00000547967 MAGI1Q96QZ7 1491 aaPredicted RBP17.59■□□□□ 0.41
RNF41-203ENST00000547967 KIAA0586Q9BVV6 1533 aa17.59■□□□□ 0.41
RNF41-203ENST00000547967 MTUS2Q5JR59 1369 aa17.58■□□□□ 0.41
RNF41-203ENST00000547967 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
RNF41-203ENST00000547967 UGGT2Q9NYU1 1516 aa17.54■□□□□ 0.4
RNF41-203ENST00000547967 LRRIQ1Q96JM4 1722 aa17.53■□□□□ 0.4
RNF41-203ENST00000547967 CEP170Q5SW79 1584 aa17.51■□□□□ 0.39
RNF41-203ENST00000547967 DISP1Q96F81 1524 aa17.51■□□□□ 0.39
RNF41-203ENST00000547967 JPH4Q96JJ6 628 aa17.49■□□□□ 0.39
RNF41-203ENST00000547967 KIAA0556O60303 1618 aa17.47■□□□□ 0.39
RNF41-203ENST00000547967 CDK13Q14004 1512 aaKnown RBP17.45■□□□□ 0.38
RNF41-203ENST00000547967 EPRSP07814 1512 aaKnown RBP17.45■□□□□ 0.38
RNF41-203ENST00000547967 DHX57Q6P158 1386 aaKnown RBP17.45■□□□□ 0.38
RNF41-203ENST00000547967 NCOA2Q15596 1464 aa17.45■□□□□ 0.38
RNF41-203ENST00000547967 HECW1Q76N89 1606 aa17.44■□□□□ 0.38
RNF41-203ENST00000547967 NUP160Q12769 1436 aa17.44■□□□□ 0.38
RNF41-203ENST00000547967 CCDC18Q5T9S5 1454 aa17.44■□□□□ 0.38
RNF41-203ENST00000547967 MAGI3Q5TCQ9 1506 aa17.44■□□□□ 0.38
RNF41-203ENST00000547967 FGD6Q6ZV73 1430 aa17.43■□□□□ 0.38
RNF41-203ENST00000547967 RAB3GAP2Q9H2M9 1393 aa17.42■□□□□ 0.38
RNF41-203ENST00000547967 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
RNF41-203ENST00000547967 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
RNF41-203ENST00000547967 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
RNF41-203ENST00000547967 MYOM3Q5VTT5 1437 aa17.38■□□□□ 0.37
RNF41-203ENST00000547967 SETD5Q9C0A6 1442 aa17.38■□□□□ 0.37
RNF41-203ENST00000547967 NUP153P49790 1475 aaKnown RBP17.36■□□□□ 0.37
RNF41-203ENST00000547967 PLB1Q6P1J6 1458 aa17.36■□□□□ 0.37
RNF41-203ENST00000547967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.34■□□□□ 0.37
RNF41-203ENST00000547967 RAPGEF6Q8TEU7 1601 aa17.34■□□□□ 0.37
RNF41-203ENST00000547967 CLSPNQ9HAW4 1339 aa17.32■□□□□ 0.36
RNF41-203ENST00000547967 CDK11AQ9UQ88 783 aaPredicted RBP17.32■□□□□ 0.36
RNF41-203ENST00000547967 PTPRKQ15262 1439 aa17.31■□□□□ 0.36
RNF41-203ENST00000547967 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
RNF41-203ENST00000547967 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
RNF41-203ENST00000547967 CHIC2Q9UKJ5 165 aa17.3■□□□□ 0.36
RNF41-203ENST00000547967 CHD1O14646 1710 aa17.29■□□□□ 0.36
RNF41-203ENST00000547967 PTPN23Q9H3S7 1636 aa17.27■□□□□ 0.36
RNF41-203ENST00000547967 ZNF316A6NFI3 1004 aaPredicted RBP17.25■□□□□ 0.35
RNF41-203ENST00000547967 RRP7BPQ9NSQ0 103 aa17.25■□□□□ 0.35
RNF41-203ENST00000547967 PTPRGP23470 1445 aa17.23■□□□□ 0.35
RNF41-203ENST00000547967 ZNF644Q9H582 1327 aaPredicted RBP17.23■□□□□ 0.35
RNF41-203ENST00000547967 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
RNF41-203ENST00000547967 PLEKHD1A6NEE1 506 aa17.21■□□□□ 0.35
RNF41-203ENST00000547967 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
RNF41-203ENST00000547967 TROQ12816 1431 aaPredicted RBP17.2■□□□□ 0.34
RNF41-203ENST00000547967 SIN3AQ96ST3 1273 aa17.2■□□□□ 0.34
RNF41-203ENST00000547967 MAPKBP1O60336 1514 aa17.2■□□□□ 0.34
RNF41-203ENST00000547967 MIA2Q96PC5 1412 aa17.2■□□□□ 0.34
RNF41-203ENST00000547967 HFM1A2PYH4 1435 aa17.19■□□□□ 0.34
RNF41-203ENST00000547967 ZNF777Q9ULD5 760 aaPredicted RBP17.19■□□□□ 0.34
RNF41-203ENST00000547967 TCOF1Q13428 1488 aaKnown RBP17.18■□□□□ 0.34
RNF41-203ENST00000547967 NAIPQ13075 1403 aa17.18■□□□□ 0.34
RNF41-203ENST00000547967 ATP10BO94823 1461 aa17.17■□□□□ 0.34
RNF41-203ENST00000547967 ABCA8O94911 1581 aa17.17■□□□□ 0.34
RNF41-203ENST00000547967 CFDP1Q9UEE9 299 aaPredicted RBP17.17■□□□□ 0.34
RNF41-203ENST00000547967 KIF14Q15058 1648 aa17.14■□□□□ 0.33
RNF41-203ENST00000547967 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
RNF41-203ENST00000547967 TRIM52Q96A61 297 aa17.11■□□□□ 0.33
RNF41-203ENST00000547967 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
RNF41-203ENST00000547967 SHROOM2Q13796 1616 aa17.09■□□□□ 0.33
RNF41-203ENST00000547967 DAPK1P53355 1430 aa17.09■□□□□ 0.33
RNF41-203ENST00000547967 UACAQ9BZF9 1416 aa17.09■□□□□ 0.33
RNF41-203ENST00000547967 ABCC5O15440 1437 aa17.08■□□□□ 0.33
RNF41-203ENST00000547967 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
RNF41-203ENST00000547967 KDM6BO15054 1643 aa17.04■□□□□ 0.32
RNF41-203ENST00000547967 ADCY10Q96PN6 1610 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms