RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 NUP160Q12769 1436 aa24.03■■□□□ 1.44
LETMD1-212ENST00000547877 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
LETMD1-212ENST00000547877 KIAA0586Q9BVV6 1533 aa23.96■■□□□ 1.43
LETMD1-212ENST00000547877 IQGAP2Q13576 1575 aa23.94■■□□□ 1.42
LETMD1-212ENST00000547877 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
LETMD1-212ENST00000547877 OSCARQ8IYS5 282 aa23.9■■□□□ 1.42
LETMD1-212ENST00000547877 CEP162Q5TB80 1403 aa23.89■■□□□ 1.41
LETMD1-212ENST00000547877 CLASP1Q7Z460 1538 aa23.87■■□□□ 1.41
LETMD1-212ENST00000547877 CLIP1P30622 1438 aa23.83■■□□□ 1.41
LETMD1-212ENST00000547877 JPH4Q96JJ6 628 aa23.82■■□□□ 1.4
LETMD1-212ENST00000547877 UGGT2Q9NYU1 1516 aa23.8■■□□□ 1.4
LETMD1-212ENST00000547877 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
LETMD1-212ENST00000547877 ARHGAP35Q9NRY4 1499 aa23.76■■□□□ 1.39
LETMD1-212ENST00000547877 SAMD9Q5K651 1589 aa23.75■■□□□ 1.39
LETMD1-212ENST00000547877 EFCAB5A4FU69 1503 aa23.75■■□□□ 1.39
LETMD1-212ENST00000547877 DISP1Q96F81 1524 aa23.73■■□□□ 1.39
LETMD1-212ENST00000547877 P3H3Q8IVL6 736 aa23.71■■□□□ 1.39
LETMD1-212ENST00000547877 PRG4Q92954 1404 aaPredicted RBP23.71■■□□□ 1.39
LETMD1-212ENST00000547877 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
LETMD1-212ENST00000547877 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
LETMD1-212ENST00000547877 CARMIL2Q6F5E8 1435 aa23.68■■□□□ 1.38
LETMD1-212ENST00000547877 FHOD3Q2V2M9 1422 aa23.67■■□□□ 1.38
LETMD1-212ENST00000547877 ERCC6L2Q5T890 1561 aa23.64■■□□□ 1.37
LETMD1-212ENST00000547877 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
LETMD1-212ENST00000547877 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
LETMD1-212ENST00000547877 FMN1Q68DA7 1419 aa23.54■■□□□ 1.36
LETMD1-212ENST00000547877 ARHGEF11O15085 1522 aa23.51■■□□□ 1.35
LETMD1-212ENST00000547877 PTPRGP23470 1445 aa23.5■■□□□ 1.35
LETMD1-212ENST00000547877 RIMBP3CA6NJZ7 1639 aa23.44■■□□□ 1.34
LETMD1-212ENST00000547877 RIMBP3BA6NNM3 1639 aa23.44■■□□□ 1.34
LETMD1-212ENST00000547877 PCF11O94913 1555 aaKnown RBP23.44■■□□□ 1.34
LETMD1-212ENST00000547877 RIMBP3Q9UFD9 1639 aa23.44■■□□□ 1.34
LETMD1-212ENST00000547877 PLB1Q6P1J6 1458 aa23.43■■□□□ 1.34
LETMD1-212ENST00000547877 CASKIN1Q8WXD9 1431 aa23.42■■□□□ 1.34
LETMD1-212ENST00000547877 FYCO1Q9BQS8 1478 aa23.4■■□□□ 1.34
LETMD1-212ENST00000547877 RAPGEF6Q8TEU7 1601 aa23.39■■□□□ 1.34
LETMD1-212ENST00000547877 ABCA8O94911 1581 aa23.39■■□□□ 1.33
LETMD1-212ENST00000547877 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
LETMD1-212ENST00000547877 UACAQ9BZF9 1416 aa23.37■■□□□ 1.33
LETMD1-212ENST00000547877 HECW1Q76N89 1606 aa23.35■■□□□ 1.33
LETMD1-212ENST00000547877 NUP153P49790 1475 aaKnown RBP23.33■■□□□ 1.33
LETMD1-212ENST00000547877 ABCC2Q92887 1545 aa23.31■■□□□ 1.32
LETMD1-212ENST00000547877 LRRIQ1Q96JM4 1722 aa23.3■■□□□ 1.32
LETMD1-212ENST00000547877 ARID3CA6NKF2 412 aa23.29■■□□□ 1.32
LETMD1-212ENST00000547877 CYB5RLQ6IPT4 315 aa23.29■■□□□ 1.32
LETMD1-212ENST00000547877 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
LETMD1-212ENST00000547877 UHRF1BP1LA0JNW5 1464 aa23.28■■□□□ 1.32
LETMD1-212ENST00000547877 EPRSP07814 1512 aaKnown RBP23.28■■□□□ 1.32
LETMD1-212ENST00000547877 ADCY10Q96PN6 1610 aa23.27■■□□□ 1.32
LETMD1-212ENST00000547877 APLP2Q06481 763 aa23.27■■□□□ 1.32
LETMD1-212ENST00000547877 CCDC18Q5T9S5 1454 aa23.25■■□□□ 1.31
LETMD1-212ENST00000547877 CDK13Q14004 1512 aaKnown RBP23.25■■□□□ 1.31
LETMD1-212ENST00000547877 TIAM1Q13009 1591 aa23.23■■□□□ 1.31
LETMD1-212ENST00000547877 MAP3K1Q13233 1512 aa23.22■■□□□ 1.31
LETMD1-212ENST00000547877 ATP10BO94823 1461 aa23.22■■□□□ 1.31
LETMD1-212ENST00000547877 CFAP43Q8NDM7 1665 aa23.21■■□□□ 1.31
LETMD1-212ENST00000547877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.2■■□□□ 1.3
LETMD1-212ENST00000547877 HNRNPUL2Q1KMD3 747 aaKnown RBP23.2■■□□□ 1.3
LETMD1-212ENST00000547877 KDM5BQ9UGL1 1544 aa23.19■■□□□ 1.3
LETMD1-212ENST00000547877 ZCCHC11Q5TAX3 1644 aaKnown RBP23.16■■□□□ 1.3
LETMD1-212ENST00000547877 KANK4Q5T7N3 995 aaPredicted RBP23.16■■□□□ 1.3
LETMD1-212ENST00000547877 PPARGC1BQ86YN6 1023 aaKnown RBP23.16■■□□□ 1.3
LETMD1-212ENST00000547877 LRRC9Q6ZRR7 1453 aa23.13■■□□□ 1.29
LETMD1-212ENST00000547877 MAGI3Q5TCQ9 1506 aa23.11■■□□□ 1.29
LETMD1-212ENST00000547877 CDK11AQ9UQ88 783 aaPredicted RBP23.11■■□□□ 1.29
LETMD1-212ENST00000547877 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
LETMD1-212ENST00000547877 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
LETMD1-212ENST00000547877 PLEKHD1A6NEE1 506 aa23.08■■□□□ 1.28
LETMD1-212ENST00000547877 EHBP1L1Q8N3D4 1523 aa23.06■■□□□ 1.28
LETMD1-212ENST00000547877 TROQ12816 1431 aaPredicted RBP23.04■■□□□ 1.28
LETMD1-212ENST00000547877 ASXL2Q76L83 1435 aa23.01■■□□□ 1.27
LETMD1-212ENST00000547877 WDR7Q9Y4E6 1490 aa22.99■■□□□ 1.27
LETMD1-212ENST00000547877 MAPKBP1O60336 1514 aa22.97■■□□□ 1.27
LETMD1-212ENST00000547877 SUPT6HQ7KZ85 1726 aaKnown RBP22.97■■□□□ 1.27
LETMD1-212ENST00000547877 KIF14Q15058 1648 aa22.96■■□□□ 1.27
LETMD1-212ENST00000547877 NCOA2Q15596 1464 aa22.95■■□□□ 1.26
LETMD1-212ENST00000547877 KCNH8Q96L42 1107 aa22.94■■□□□ 1.26
LETMD1-212ENST00000547877 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
LETMD1-212ENST00000547877 TRIM26Q12899 539 aaPredicted RBP22.91■■□□□ 1.26
LETMD1-212ENST00000547877 PHLDB1Q86UU1 1377 aa22.89■■□□□ 1.26
LETMD1-212ENST00000547877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.87■■□□□ 1.25
LETMD1-212ENST00000547877 ABCC10Q5T3U5 1492 aa22.87■■□□□ 1.25
LETMD1-212ENST00000547877 TTC37Q6PGP7 1564 aa22.85■■□□□ 1.25
LETMD1-212ENST00000547877 CCNB3Q8WWL7 1395 aa22.84■■□□□ 1.25
LETMD1-212ENST00000547877 HRCP23327 699 aa22.82■■□□□ 1.24
LETMD1-212ENST00000547877 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
LETMD1-212ENST00000547877 GPATCH8Q9UKJ3 1502 aaKnown RBP22.8■■□□□ 1.24
LETMD1-212ENST00000547877 ABCA9Q8IUA7 1624 aa22.8■■□□□ 1.24
LETMD1-212ENST00000547877 CDC42BPAQ5VT25 1732 aa22.78■■□□□ 1.24
LETMD1-212ENST00000547877 DIP2BQ9P265 1576 aa22.78■■□□□ 1.24
LETMD1-212ENST00000547877 ITSN2Q9NZM3 1697 aa22.77■■□□□ 1.24
LETMD1-212ENST00000547877 FGD6Q6ZV73 1430 aa22.76■■□□□ 1.23
LETMD1-212ENST00000547877 MYO5CQ9NQX4 1742 aa22.76■■□□□ 1.23
LETMD1-212ENST00000547877 FAM69CQ0P6D2 419 aa22.75■■□□□ 1.23
LETMD1-212ENST00000547877 GLI2P10070 1586 aa22.75■■□□□ 1.23
LETMD1-212ENST00000547877 PREX2Q70Z35 1606 aa22.74■■□□□ 1.23
LETMD1-212ENST00000547877 RRBP1Q9P2E9 1410 aaKnown RBP22.74■■□□□ 1.23
LETMD1-212ENST00000547877 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
LETMD1-212ENST00000547877 MIA2Q96PC5 1412 aa22.73■■□□□ 1.23
LETMD1-212ENST00000547877 CDC42BPBQ9Y5S2 1711 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms