RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 KIAA0586Q9BVV6 1533 aa19.97■□□□□ 0.79
RAB5C-204ENST00000547517 RAPGEF2Q9Y4G8 1499 aa19.97■□□□□ 0.79
RAB5C-204ENST00000547517 PRG4Q92954 1404 aaPredicted RBP19.96■□□□□ 0.79
RAB5C-204ENST00000547517 JPH4Q96JJ6 628 aa19.94■□□□□ 0.78
RAB5C-204ENST00000547517 IQGAP2Q13576 1575 aa19.9■□□□□ 0.78
RAB5C-204ENST00000547517 PRXQ9BXM0 1461 aa19.88■□□□□ 0.77
RAB5C-204ENST00000547517 CHIC1Q5VXU3 224 aa19.87■□□□□ 0.77
RAB5C-204ENST00000547517 EEA1Q15075 1411 aa19.85■□□□□ 0.77
RAB5C-204ENST00000547517 CTTNBP2Q8WZ74 1663 aa19.82■□□□□ 0.76
RAB5C-204ENST00000547517 CSRNP3Q8WYN3 585 aa19.8■□□□□ 0.76
RAB5C-204ENST00000547517 FAM9AQ8IZU1 332 aaPredicted RBP19.78■□□□□ 0.76
RAB5C-204ENST00000547517 CARMIL2Q6F5E8 1435 aa19.76■□□□□ 0.75
RAB5C-204ENST00000547517 UGGT2Q9NYU1 1516 aa19.76■□□□□ 0.75
RAB5C-204ENST00000547517 DISP1Q96F81 1524 aa19.74■□□□□ 0.75
RAB5C-204ENST00000547517 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
RAB5C-204ENST00000547517 KIAA0556O60303 1618 aa19.72■□□□□ 0.75
RAB5C-204ENST00000547517 TTBK1Q5TCY1 1321 aaPredicted RBP19.71■□□□□ 0.75
RAB5C-204ENST00000547517 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
RAB5C-204ENST00000547517 TRHP20396 242 aaPredicted RBP19.7■□□□□ 0.74
RAB5C-204ENST00000547517 ADCY10Q96PN6 1610 aa19.69■□□□□ 0.74
RAB5C-204ENST00000547517 PTPRGP23470 1445 aa19.69■□□□□ 0.74
RAB5C-204ENST00000547517 KIF21BO75037 1637 aa19.69■□□□□ 0.74
RAB5C-204ENST00000547517 GOLGA3Q08378 1498 aa19.64■□□□□ 0.73
RAB5C-204ENST00000547517 NPM1P06748 294 aaKnown RBP eCLIP19.58■□□□□ 0.72
RAB5C-204ENST00000547517 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
RAB5C-204ENST00000547517 UACAQ9BZF9 1416 aa19.57■□□□□ 0.72
RAB5C-204ENST00000547517 MAPKBP1O60336 1514 aa19.56■□□□□ 0.72
RAB5C-204ENST00000547517 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
RAB5C-204ENST00000547517 UHRF1BP1LA0JNW5 1464 aa19.55■□□□□ 0.72
RAB5C-204ENST00000547517 SAMD9Q5K651 1589 aa19.55■□□□□ 0.72
RAB5C-204ENST00000547517 RANGAP1P46060 587 aaPredicted RBP19.52■□□□□ 0.72
RAB5C-204ENST00000547517 PLB1Q6P1J6 1458 aa19.52■□□□□ 0.72
RAB5C-204ENST00000547517 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
RAB5C-204ENST00000547517 KIF13AQ9H1H9 1805 aa19.49■□□□□ 0.71
RAB5C-204ENST00000547517 ABCA8O94911 1581 aa19.49■□□□□ 0.71
RAB5C-204ENST00000547517 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
RAB5C-204ENST00000547517 DIP2BQ9P265 1576 aa19.47■□□□□ 0.71
RAB5C-204ENST00000547517 ABCC10Q5T3U5 1492 aa19.47■□□□□ 0.71
RAB5C-204ENST00000547517 ZCCHC11Q5TAX3 1644 aaKnown RBP19.47■□□□□ 0.71
RAB5C-204ENST00000547517 KDM5BQ9UGL1 1544 aa19.46■□□□□ 0.71
RAB5C-204ENST00000547517 EFCAB5A4FU69 1503 aa19.46■□□□□ 0.71
RAB5C-204ENST00000547517 FHOD3Q2V2M9 1422 aa19.45■□□□□ 0.7
RAB5C-204ENST00000547517 ASXL2Q76L83 1435 aa19.43■□□□□ 0.7
RAB5C-204ENST00000547517 FAM69CQ0P6D2 419 aa19.41■□□□□ 0.7
RAB5C-204ENST00000547517 RAPGEF6Q8TEU7 1601 aa19.39■□□□□ 0.69
RAB5C-204ENST00000547517 ARID3CA6NKF2 412 aa19.35■□□□□ 0.69
RAB5C-204ENST00000547517 ARHGAP35Q9NRY4 1499 aa19.34■□□□□ 0.69
RAB5C-204ENST00000547517 WDR7Q9Y4E6 1490 aa19.34■□□□□ 0.69
RAB5C-204ENST00000547517 EPRSP07814 1512 aaKnown RBP19.32■□□□□ 0.68
RAB5C-204ENST00000547517 GLI2P10070 1586 aa19.32■□□□□ 0.68
RAB5C-204ENST00000547517 TSPOAP1O95153 1857 aa19.31■□□□□ 0.68
RAB5C-204ENST00000547517 NUP153P49790 1475 aaKnown RBP19.3■□□□□ 0.68
RAB5C-204ENST00000547517 ATP10BO94823 1461 aa19.29■□□□□ 0.68
RAB5C-204ENST00000547517 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
RAB5C-204ENST00000547517 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
RAB5C-204ENST00000547517 PPRC1Q5VV67 1664 aaKnown RBP19.24■□□□□ 0.67
RAB5C-204ENST00000547517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.22■□□□□ 0.67
RAB5C-204ENST00000547517 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
RAB5C-204ENST00000547517 HECW1Q76N89 1606 aa19.22■□□□□ 0.67
RAB5C-204ENST00000547517 CLIP1P30622 1438 aa19.2■□□□□ 0.66
RAB5C-204ENST00000547517 KCNH8Q96L42 1107 aa19.2■□□□□ 0.66
RAB5C-204ENST00000547517 CDK13Q14004 1512 aaKnown RBP19.19■□□□□ 0.66
RAB5C-204ENST00000547517 KDM6BO15054 1643 aa19.18■□□□□ 0.66
RAB5C-204ENST00000547517 CFAP43Q8NDM7 1665 aa19.17■□□□□ 0.66
RAB5C-204ENST00000547517 PCF11O94913 1555 aaKnown RBP19.16■□□□□ 0.66
RAB5C-204ENST00000547517 ATP1B4Q9UN42 357 aaPredicted RBP19.16■□□□□ 0.66
RAB5C-204ENST00000547517 TEX14Q8IWB6 1497 aa19.16■□□□□ 0.66
RAB5C-204ENST00000547517 CD109Q6YHK3 1445 aa19.14■□□□□ 0.65
RAB5C-204ENST00000547517 ABCA9Q8IUA7 1624 aa19.13■□□□□ 0.65
RAB5C-204ENST00000547517 CEP162Q5TB80 1403 aa19.11■□□□□ 0.65
RAB5C-204ENST00000547517 MAGI3Q5TCQ9 1506 aa19.1■□□□□ 0.65
RAB5C-204ENST00000547517 LRRIQ1Q96JM4 1722 aa19.1■□□□□ 0.65
RAB5C-204ENST00000547517 CASKIN1Q8WXD9 1431 aa19.09■□□□□ 0.65
RAB5C-204ENST00000547517 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
RAB5C-204ENST00000547517 LOC105371045A0A1W2PR82 267 aa19.07■□□□□ 0.64
RAB5C-204ENST00000547517 FYCO1Q9BQS8 1478 aa19.07■□□□□ 0.64
RAB5C-204ENST00000547517 CCDC18Q5T9S5 1454 aa19.05■□□□□ 0.64
RAB5C-204ENST00000547517 TTC37Q6PGP7 1564 aa19.04■□□□□ 0.64
RAB5C-204ENST00000547517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.04■□□□□ 0.64
RAB5C-204ENST00000547517 COL17A1Q9UMD9 1497 aaPredicted RBP19.03■□□□□ 0.64
RAB5C-204ENST00000547517 KIF14Q15058 1648 aa19■□□□□ 0.63
RAB5C-204ENST00000547517 CDK11AQ9UQ88 783 aaPredicted RBP19■□□□□ 0.63
RAB5C-204ENST00000547517 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
RAB5C-204ENST00000547517 ILDR1Q86SU0 546 aaPredicted RBP18.98■□□□□ 0.63
RAB5C-204ENST00000547517 NEO1Q92859 1461 aa18.96■□□□□ 0.63
RAB5C-204ENST00000547517 CFAP74Q9C0B2 1584 aa18.94■□□□□ 0.62
RAB5C-204ENST00000547517 ARAP3Q8WWN8 1544 aa18.94■□□□□ 0.62
RAB5C-204ENST00000547517 FANCAO15360 1455 aa18.93■□□□□ 0.62
RAB5C-204ENST00000547517 MYO5CQ9NQX4 1742 aa18.92■□□□□ 0.62
RAB5C-204ENST00000547517 PHLDB1Q86UU1 1377 aa18.91■□□□□ 0.62
RAB5C-204ENST00000547517 PLCH2O75038 1416 aa18.89■□□□□ 0.61
RAB5C-204ENST00000547517 FRMPD1Q5SYB0 1578 aa18.87■□□□□ 0.61
RAB5C-204ENST00000547517 AKNAQ7Z591 1439 aa18.87■□□□□ 0.61
RAB5C-204ENST00000547517 VPS8Q8N3P4 1428 aa18.87■□□□□ 0.61
RAB5C-204ENST00000547517 ARHGAP5Q13017 1502 aa18.86■□□□□ 0.61
RAB5C-204ENST00000547517 PREX2Q70Z35 1606 aa18.84■□□□□ 0.61
RAB5C-204ENST00000547517 DENND4BO75064 1496 aaPredicted RBP18.84■□□□□ 0.61
RAB5C-204ENST00000547517 ADGRL1O94910 1474 aa18.84■□□□□ 0.61
RAB5C-204ENST00000547517 MTUS2Q5JR59 1369 aa18.83■□□□□ 0.61
RAB5C-204ENST00000547517 RAPGEF3O95398 923 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms