RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
DDB1-224ENST00000545894 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
DDB1-224ENST00000545894 RAPGEF2Q9Y4G8 1499 aa17.42■□□□□ 0.38
DDB1-224ENST00000545894 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
DDB1-224ENST00000545894 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
DDB1-224ENST00000545894 CHD1O14646 1710 aa17.39■□□□□ 0.38
DDB1-224ENST00000545894 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.37
DDB1-224ENST00000545894 KIF21BO75037 1637 aa17.36■□□□□ 0.37
DDB1-224ENST00000545894 DIEXFQ68CQ4 756 aaKnown RBP17.35■□□□□ 0.37
DDB1-224ENST00000545894 OSCARQ8IYS5 282 aa17.33■□□□□ 0.37
DDB1-224ENST00000545894 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
DDB1-224ENST00000545894 NUP160Q12769 1436 aa17.32■□□□□ 0.36
DDB1-224ENST00000545894 NEUROD1Q13562 356 aa17.32■□□□□ 0.36
DDB1-224ENST00000545894 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
DDB1-224ENST00000545894 GOLGA3Q08378 1498 aa17.3■□□□□ 0.36
DDB1-224ENST00000545894 CENPBP07199 599 aaPredicted RBP17.28■□□□□ 0.36
DDB1-224ENST00000545894 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.36
DDB1-224ENST00000545894 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
DDB1-224ENST00000545894 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
DDB1-224ENST00000545894 JPH4Q96JJ6 628 aa17.18■□□□□ 0.34
DDB1-224ENST00000545894 ZNF316A6NFI3 1004 aaPredicted RBP17.18■□□□□ 0.34
DDB1-224ENST00000545894 GTF3C3Q9Y5Q9 886 aa17.18■□□□□ 0.34
DDB1-224ENST00000545894 IQGAP2Q13576 1575 aa17.18■□□□□ 0.34
DDB1-224ENST00000545894 CTTNBP2Q8WZ74 1663 aa17.18■□□□□ 0.34
DDB1-224ENST00000545894 RANGAP1P46060 587 aaPredicted RBP17.14■□□□□ 0.33
DDB1-224ENST00000545894 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
DDB1-224ENST00000545894 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
DDB1-224ENST00000545894 PRG4Q92954 1404 aaPredicted RBP17.1■□□□□ 0.33
DDB1-224ENST00000545894 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
DDB1-224ENST00000545894 CLIP1P30622 1438 aa17.07■□□□□ 0.32
DDB1-224ENST00000545894 DISP1Q96F81 1524 aa17.07■□□□□ 0.32
DDB1-224ENST00000545894 DNAJC5Q9H3Z4 198 aa17.06■□□□□ 0.32
DDB1-224ENST00000545894 P3H3Q8IVL6 736 aa17.05■□□□□ 0.32
DDB1-224ENST00000545894 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
DDB1-224ENST00000545894 CARMIL2Q6F5E8 1435 aa17.03■□□□□ 0.32
DDB1-224ENST00000545894 ARHGEF11O15085 1522 aa17.03■□□□□ 0.32
DDB1-224ENST00000545894 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
DDB1-224ENST00000545894 ARHGAP35Q9NRY4 1499 aa17.01■□□□□ 0.31
DDB1-224ENST00000545894 SAMD9Q5K651 1589 aa17.01■□□□□ 0.31
DDB1-224ENST00000545894 KIAA0556O60303 1618 aa17.01■□□□□ 0.31
DDB1-224ENST00000545894 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
DDB1-224ENST00000545894 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
DDB1-224ENST00000545894 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
DDB1-224ENST00000545894 EFCAB5A4FU69 1503 aa16.99■□□□□ 0.31
DDB1-224ENST00000545894 FHOD3Q2V2M9 1422 aa16.98■□□□□ 0.31
DDB1-224ENST00000545894 APLP2Q06481 763 aa16.98■□□□□ 0.31
DDB1-224ENST00000545894 PTPRGP23470 1445 aa16.94■□□□□ 0.3
DDB1-224ENST00000545894 MIER1Q8N108 512 aa16.94■□□□□ 0.3
DDB1-224ENST00000545894 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
DDB1-224ENST00000545894 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
DDB1-224ENST00000545894 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
DDB1-224ENST00000545894 PLB1Q6P1J6 1458 aa16.85■□□□□ 0.29
DDB1-224ENST00000545894 FMN1Q68DA7 1419 aa16.85■□□□□ 0.29
DDB1-224ENST00000545894 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
DDB1-224ENST00000545894 UACAQ9BZF9 1416 aa16.83■□□□□ 0.29
DDB1-224ENST00000545894 MYT1Q01538 1121 aa16.82■□□□□ 0.28
DDB1-224ENST00000545894 ABCA8O94911 1581 aa16.82■□□□□ 0.28
DDB1-224ENST00000545894 ATP1B4Q9UN42 357 aaPredicted RBP16.79■□□□□ 0.28
DDB1-224ENST00000545894 UHRF1BP1LA0JNW5 1464 aa16.78■□□□□ 0.28
DDB1-224ENST00000545894 RAPGEF6Q8TEU7 1601 aa16.78■□□□□ 0.28
DDB1-224ENST00000545894 ABCC2Q92887 1545 aa16.78■□□□□ 0.28
DDB1-224ENST00000545894 ADCY10Q96PN6 1610 aa16.78■□□□□ 0.28
DDB1-224ENST00000545894 CASKIN1Q8WXD9 1431 aa16.77■□□□□ 0.28
DDB1-224ENST00000545894 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.28
DDB1-224ENST00000545894 ARID3CA6NKF2 412 aa16.76■□□□□ 0.27
DDB1-224ENST00000545894 PCF11O94913 1555 aaKnown RBP16.76■□□□□ 0.27
DDB1-224ENST00000545894 NUP153P49790 1475 aaKnown RBP16.75■□□□□ 0.27
DDB1-224ENST00000545894 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
DDB1-224ENST00000545894 ATP10BO94823 1461 aa16.71■□□□□ 0.27
DDB1-224ENST00000545894 HECW1Q76N89 1606 aa16.71■□□□□ 0.27
DDB1-224ENST00000545894 KDM5BQ9UGL1 1544 aa16.7■□□□□ 0.26
DDB1-224ENST00000545894 NPM1P06748 294 aaKnown RBP eCLIP16.7■□□□□ 0.26
DDB1-224ENST00000545894 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
DDB1-224ENST00000545894 KANK4Q5T7N3 995 aaPredicted RBP16.69■□□□□ 0.26
DDB1-224ENST00000545894 RRBP1Q9P2E9 1410 aaKnown RBP16.69■□□□□ 0.26
DDB1-224ENST00000545894 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
DDB1-224ENST00000545894 LRRIQ1Q96JM4 1722 aa16.66■□□□□ 0.26
DDB1-224ENST00000545894 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
DDB1-224ENST00000545894 CCDC18Q5T9S5 1454 aa16.64■□□□□ 0.25
DDB1-224ENST00000545894 ASXL2Q76L83 1435 aa16.6■□□□□ 0.25
DDB1-224ENST00000545894 CCNB3Q8WWL7 1395 aa16.6■□□□□ 0.25
DDB1-224ENST00000545894 PLEKHD1A6NEE1 506 aa16.59■□□□□ 0.25
DDB1-224ENST00000545894 TIAM1Q13009 1591 aa16.58■□□□□ 0.25
DDB1-224ENST00000545894 MAPKBP1O60336 1514 aa16.58■□□□□ 0.24
DDB1-224ENST00000545894 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.24
DDB1-224ENST00000545894 MAP3K1Q13233 1512 aa16.57■□□□□ 0.24
DDB1-224ENST00000545894 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
DDB1-224ENST00000545894 WDR7Q9Y4E6 1490 aa16.56■□□□□ 0.24
DDB1-224ENST00000545894 CFAP43Q8NDM7 1665 aa16.56■□□□□ 0.24
DDB1-224ENST00000545894 KCNH8Q96L42 1107 aa16.55■□□□□ 0.24
DDB1-224ENST00000545894 TROQ12816 1431 aaPredicted RBP16.54■□□□□ 0.24
DDB1-224ENST00000545894 MTUS2Q5JR59 1369 aa16.53■□□□□ 0.24
DDB1-224ENST00000545894 LRRC9Q6ZRR7 1453 aa16.53■□□□□ 0.24
DDB1-224ENST00000545894 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
DDB1-224ENST00000545894 ABCC10Q5T3U5 1492 aa16.49■□□□□ 0.23
DDB1-224ENST00000545894 EHBP1L1Q8N3D4 1523 aa16.48■□□□□ 0.23
DDB1-224ENST00000545894 ITGAEP38570 1179 aa16.47■□□□□ 0.23
DDB1-224ENST00000545894 FAM69CQ0P6D2 419 aa16.47■□□□□ 0.23
DDB1-224ENST00000545894 RAB3GAP2Q9H2M9 1393 aa16.47■□□□□ 0.23
DDB1-224ENST00000545894 KIF14Q15058 1648 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms