RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 NISCHQ9Y2I1 1504 aa25.03■■□□□ 1.6
DDB1-224ENST00000545894 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
DDB1-224ENST00000545894 ABCC9O60706 1549 aa21.31■■□□□ 1
DDB1-224ENST00000545894 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
DDB1-224ENST00000545894 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
DDB1-224ENST00000545894 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
DDB1-224ENST00000545894 NACADO15069 1562 aa20.66■□□□□ 0.9
DDB1-224ENST00000545894 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.89
DDB1-224ENST00000545894 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
DDB1-224ENST00000545894 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
DDB1-224ENST00000545894 UNC13AQ9UPW8 1703 aa20.12■□□□□ 0.81
DDB1-224ENST00000545894 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
DDB1-224ENST00000545894 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
DDB1-224ENST00000545894 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
DDB1-224ENST00000545894 CECR2Q9BXF3 1484 aa19.51■□□□□ 0.71
DDB1-224ENST00000545894 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
DDB1-224ENST00000545894 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
DDB1-224ENST00000545894 BAZ1AQ9NRL2 1556 aaPredicted RBP19.35■□□□□ 0.69
DDB1-224ENST00000545894 SMARCA4P51532 1647 aa19.33■□□□□ 0.69
DDB1-224ENST00000545894 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
DDB1-224ENST00000545894 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
DDB1-224ENST00000545894 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
DDB1-224ENST00000545894 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
DDB1-224ENST00000545894 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
DDB1-224ENST00000545894 PEG3Q9GZU2 1588 aa19.12■□□□□ 0.65
DDB1-224ENST00000545894 WIZO95785 1651 aa19.12■□□□□ 0.65
DDB1-224ENST00000545894 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
DDB1-224ENST00000545894 SMARCA2P51531 1590 aa19.11■□□□□ 0.65
DDB1-224ENST00000545894 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
DDB1-224ENST00000545894 BAZ1BQ9UIG0 1483 aaKnown RBP19■□□□□ 0.63
DDB1-224ENST00000545894 HMGXB3Q12766 1538 aa19■□□□□ 0.63
DDB1-224ENST00000545894 HRCP23327 699 aa18.98■□□□□ 0.63
DDB1-224ENST00000545894 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
DDB1-224ENST00000545894 PCGF6Q9BYE7 350 aa18.76■□□□□ 0.59
DDB1-224ENST00000545894 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
DDB1-224ENST00000545894 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
DDB1-224ENST00000545894 NESP48681 1621 aa18.56■□□□□ 0.56
DDB1-224ENST00000545894 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
DDB1-224ENST00000545894 CFTRP13569 1480 aa18.52■□□□□ 0.56
DDB1-224ENST00000545894 LAMC3Q9Y6N6 1575 aa18.49■□□□□ 0.55
DDB1-224ENST00000545894 PPARGC1BQ86YN6 1023 aaKnown RBP18.48■□□□□ 0.55
DDB1-224ENST00000545894 TRIM26Q12899 539 aaPredicted RBP18.39■□□□□ 0.53
DDB1-224ENST00000545894 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
DDB1-224ENST00000545894 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
DDB1-224ENST00000545894 PRDM2Q13029 1718 aa18.31■□□□□ 0.52
DDB1-224ENST00000545894 ERCC6Q03468 1493 aa18.31■□□□□ 0.52
DDB1-224ENST00000545894 KIF21AQ7Z4S6 1674 aa18.29■□□□□ 0.52
DDB1-224ENST00000545894 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
DDB1-224ENST00000545894 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
DDB1-224ENST00000545894 MRC2Q9UBG0 1479 aa18.17■□□□□ 0.5
DDB1-224ENST00000545894 URB2Q14146 1524 aaKnown RBP18.15■□□□□ 0.5
DDB1-224ENST00000545894 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
DDB1-224ENST00000545894 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
DDB1-224ENST00000545894 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
DDB1-224ENST00000545894 WRNQ14191 1432 aaPredicted RBP eCLIP18.1■□□□□ 0.49
DDB1-224ENST00000545894 WDR62O43379 1518 aa18.1■□□□□ 0.49
DDB1-224ENST00000545894 CUX1P39880 1505 aa18.1■□□□□ 0.49
DDB1-224ENST00000545894 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
DDB1-224ENST00000545894 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.48
DDB1-224ENST00000545894 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
DDB1-224ENST00000545894 TOP2BQ02880 1626 aa18■□□□□ 0.47
DDB1-224ENST00000545894 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
DDB1-224ENST00000545894 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
DDB1-224ENST00000545894 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
DDB1-224ENST00000545894 CUX2O14529 1486 aa17.97■□□□□ 0.47
DDB1-224ENST00000545894 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
DDB1-224ENST00000545894 SOGA1O94964 1423 aa17.92■□□□□ 0.46
DDB1-224ENST00000545894 RAD54L2Q9Y4B4 1467 aa17.91■□□□□ 0.46
DDB1-224ENST00000545894 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
DDB1-224ENST00000545894 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
DDB1-224ENST00000545894 EHMT2Q96KQ7 1210 aa17.81■□□□□ 0.44
DDB1-224ENST00000545894 ABCA10Q8WWZ4 1543 aa17.81■□□□□ 0.44
DDB1-224ENST00000545894 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
DDB1-224ENST00000545894 TDRD9Q8NDG6 1382 aaKnown RBP17.79■□□□□ 0.44
DDB1-224ENST00000545894 WDR97A6NE52 1622 aa17.77■□□□□ 0.43
DDB1-224ENST00000545894 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.431e-6■■■□□ 18.5
DDB1-224ENST00000545894 RUSC2Q8N2Y8 1516 aa17.7■□□□□ 0.42
DDB1-224ENST00000545894 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
DDB1-224ENST00000545894 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
DDB1-224ENST00000545894 KIF27Q86VH2 1401 aa17.69■□□□□ 0.42
DDB1-224ENST00000545894 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
DDB1-224ENST00000545894 PELP1Q8IZL8 1130 aaKnown RBP17.64■□□□□ 0.41
DDB1-224ENST00000545894 GRIN2BQ13224 1484 aa17.63■□□□□ 0.41
DDB1-224ENST00000545894 IGF1RP08069 1367 aa17.62■□□□□ 0.41
DDB1-224ENST00000545894 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
DDB1-224ENST00000545894 PBRM1Q86U86 1689 aa17.59■□□□□ 0.41
DDB1-224ENST00000545894 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.4
DDB1-224ENST00000545894 SNAPC4Q5SXM2 1469 aa17.58■□□□□ 0.4
DDB1-224ENST00000545894 EEA1Q15075 1411 aa17.57■□□□□ 0.4
DDB1-224ENST00000545894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
DDB1-224ENST00000545894 CCER1Q8TC90 406 aaPredicted RBP17.56■□□□□ 0.4
DDB1-224ENST00000545894 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
DDB1-224ENST00000545894 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
DDB1-224ENST00000545894 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
DDB1-224ENST00000545894 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
DDB1-224ENST00000545894 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
DDB1-224ENST00000545894 FBLN2P98095 1184 aa17.48■□□□□ 0.39
DDB1-224ENST00000545894 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
DDB1-224ENST00000545894 SYNJ2O15056 1496 aa17.47■□□□□ 0.39
DDB1-224ENST00000545894 CUL7Q14999 1698 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms