RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-208ENST00000545831 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
NPIPA1-208ENST00000545831 CLIP1P30622 1438 aa15.99■□□□□ 0.15
NPIPA1-208ENST00000545831 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
NPIPA1-208ENST00000545831 KIAA0586Q9BVV6 1533 aa15.98■□□□□ 0.15
NPIPA1-208ENST00000545831 NUP160Q12769 1436 aa15.97■□□□□ 0.15
NPIPA1-208ENST00000545831 CHD1O14646 1710 aa15.97■□□□□ 0.15
NPIPA1-208ENST00000545831 IQGAP2Q13576 1575 aa15.94■□□□□ 0.14
NPIPA1-208ENST00000545831 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
NPIPA1-208ENST00000545831 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
NPIPA1-208ENST00000545831 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
NPIPA1-208ENST00000545831 EFCAB5A4FU69 1503 aa15.88■□□□□ 0.13
NPIPA1-208ENST00000545831 ARHGAP35Q9NRY4 1499 aa15.87■□□□□ 0.13
NPIPA1-208ENST00000545831 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
NPIPA1-208ENST00000545831 P3H3Q8IVL6 736 aa15.86■□□□□ 0.13
NPIPA1-208ENST00000545831 CARMIL2Q6F5E8 1435 aa15.83■□□□□ 0.12
NPIPA1-208ENST00000545831 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
NPIPA1-208ENST00000545831 SAMD9Q5K651 1589 aa15.81■□□□□ 0.12
NPIPA1-208ENST00000545831 CLASP1Q7Z460 1538 aa15.81■□□□□ 0.12
NPIPA1-208ENST00000545831 FHOD3Q2V2M9 1422 aa15.8■□□□□ 0.12
NPIPA1-208ENST00000545831 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
NPIPA1-208ENST00000545831 PRG4Q92954 1404 aaPredicted RBP15.78■□□□□ 0.12
NPIPA1-208ENST00000545831 DISP1Q96F81 1524 aa15.78■□□□□ 0.12
NPIPA1-208ENST00000545831 FMN1Q68DA7 1419 aa15.77■□□□□ 0.11
NPIPA1-208ENST00000545831 KIAA0556O60303 1618 aa15.76■□□□□ 0.11
NPIPA1-208ENST00000545831 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
NPIPA1-208ENST00000545831 APLP2Q06481 763 aa15.74■□□□□ 0.11
NPIPA1-208ENST00000545831 TTBK1Q5TCY1 1321 aaPredicted RBP15.71■□□□□ 0.11
NPIPA1-208ENST00000545831 ATP1B4Q9UN42 357 aaPredicted RBP15.7■□□□□ 0.1
NPIPA1-208ENST00000545831 PTPRGP23470 1445 aa15.68■□□□□ 0.1
NPIPA1-208ENST00000545831 CASKIN1Q8WXD9 1431 aa15.67■□□□□ 0.1
NPIPA1-208ENST00000545831 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
NPIPA1-208ENST00000545831 PCF11O94913 1555 aaKnown RBP15.63■□□□□ 0.09
NPIPA1-208ENST00000545831 ERCC6L2Q5T890 1561 aa15.63■□□□□ 0.09
NPIPA1-208ENST00000545831 HECW1Q76N89 1606 aa15.6■□□□□ 0.09
NPIPA1-208ENST00000545831 RAPGEF6Q8TEU7 1601 aa15.59■□□□□ 0.09
NPIPA1-208ENST00000545831 PLB1Q6P1J6 1458 aa15.59■□□□□ 0.09
NPIPA1-208ENST00000545831 MAP3K1Q13233 1512 aa15.58■□□□□ 0.09
NPIPA1-208ENST00000545831 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
NPIPA1-208ENST00000545831 PPARGC1BQ86YN6 1023 aaKnown RBP15.56■□□□□ 0.08
NPIPA1-208ENST00000545831 CCDC18Q5T9S5 1454 aa15.56■□□□□ 0.08
NPIPA1-208ENST00000545831 ABCA8O94911 1581 aa15.56■□□□□ 0.08
NPIPA1-208ENST00000545831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
NPIPA1-208ENST00000545831 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
NPIPA1-208ENST00000545831 ARHGEF11O15085 1522 aa15.54■□□□□ 0.08
NPIPA1-208ENST00000545831 TIAM1Q13009 1591 aa15.53■□□□□ 0.08
NPIPA1-208ENST00000545831 EPRSP07814 1512 aaKnown RBP15.53■□□□□ 0.08
NPIPA1-208ENST00000545831 NUP153P49790 1475 aaKnown RBP15.53■□□□□ 0.08
NPIPA1-208ENST00000545831 ARID3CA6NKF2 412 aa15.53■□□□□ 0.08
NPIPA1-208ENST00000545831 CDK11AQ9UQ88 783 aaPredicted RBP15.53■□□□□ 0.08
NPIPA1-208ENST00000545831 KANK4Q5T7N3 995 aaPredicted RBP15.51■□□□□ 0.07
NPIPA1-208ENST00000545831 UHRF1BP1LA0JNW5 1464 aa15.51■□□□□ 0.07
NPIPA1-208ENST00000545831 ABCC2Q92887 1545 aa15.5■□□□□ 0.07
NPIPA1-208ENST00000545831 CFAP43Q8NDM7 1665 aa15.5■□□□□ 0.07
NPIPA1-208ENST00000545831 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
NPIPA1-208ENST00000545831 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
NPIPA1-208ENST00000545831 LRRC9Q6ZRR7 1453 aa15.48■□□□□ 0.07
NPIPA1-208ENST00000545831 ATP10BO94823 1461 aa15.47■□□□□ 0.07
NPIPA1-208ENST00000545831 RIMBP3CA6NJZ7 1639 aa15.47■□□□□ 0.07
NPIPA1-208ENST00000545831 RIMBP3BA6NNM3 1639 aa15.47■□□□□ 0.07
NPIPA1-208ENST00000545831 RIMBP3Q9UFD9 1639 aa15.47■□□□□ 0.07
NPIPA1-208ENST00000545831 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
NPIPA1-208ENST00000545831 LRRIQ1Q96JM4 1722 aa15.46■□□□□ 0.07
NPIPA1-208ENST00000545831 NPM1P06748 294 aaKnown RBP eCLIP15.46■□□□□ 0.07
NPIPA1-208ENST00000545831 CYB5RLQ6IPT4 315 aa15.44■□□□□ 0.06
NPIPA1-208ENST00000545831 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
NPIPA1-208ENST00000545831 KDM5BQ9UGL1 1544 aa15.42■□□□□ 0.06
NPIPA1-208ENST00000545831 TRIM26Q12899 539 aaPredicted RBP15.41■□□□□ 0.06
NPIPA1-208ENST00000545831 ADCY10Q96PN6 1610 aa15.41■□□□□ 0.06
NPIPA1-208ENST00000545831 TROQ12816 1431 aaPredicted RBP15.4■□□□□ 0.06
NPIPA1-208ENST00000545831 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
NPIPA1-208ENST00000545831 ZCCHC11Q5TAX3 1644 aaKnown RBP15.37■□□□□ 0.05
NPIPA1-208ENST00000545831 SUPT6HQ7KZ85 1726 aaKnown RBP15.37■□□□□ 0.05
NPIPA1-208ENST00000545831 NCOA2Q15596 1464 aa15.34■□□□□ 0.05
NPIPA1-208ENST00000545831 DNAJC5Q9H3Z4 198 aa15.32■□□□□ 0.04
NPIPA1-208ENST00000545831 PHLDB1Q86UU1 1377 aa15.32■□□□□ 0.04
NPIPA1-208ENST00000545831 KCNH8Q96L42 1107 aa15.31■□□□□ 0.04
NPIPA1-208ENST00000545831 CCNB3Q8WWL7 1395 aa15.31■□□□□ 0.04
NPIPA1-208ENST00000545831 KIF14Q15058 1648 aa15.3■□□□□ 0.04
NPIPA1-208ENST00000545831 WDR7Q9Y4E6 1490 aa15.29■□□□□ 0.04
NPIPA1-208ENST00000545831 ASXL2Q76L83 1435 aa15.29■□□□□ 0.04
NPIPA1-208ENST00000545831 MYOM3Q5VTT5 1437 aa15.28■□□□□ 0.04
NPIPA1-208ENST00000545831 PCGF6Q9BYE7 350 aa15.28■□□□□ 0.04
NPIPA1-208ENST00000545831 RRBP1Q9P2E9 1410 aaKnown RBP15.26■□□□□ 0.03
NPIPA1-208ENST00000545831 FGD6Q6ZV73 1430 aa15.25■□□□□ 0.03
NPIPA1-208ENST00000545831 MIA2Q96PC5 1412 aa15.25■□□□□ 0.03
NPIPA1-208ENST00000545831 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
NPIPA1-208ENST00000545831 CFDP1Q9UEE9 299 aaPredicted RBP15.24■□□□□ 0.03
NPIPA1-208ENST00000545831 ABCC10Q5T3U5 1492 aa15.24■□□□□ 0.03
NPIPA1-208ENST00000545831 MAPKBP1O60336 1514 aa15.23■□□□□ 0.03
NPIPA1-208ENST00000545831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.22■□□□□ 0.03
NPIPA1-208ENST00000545831 GPATCH8Q9UKJ3 1502 aaKnown RBP15.22■□□□□ 0.03
NPIPA1-208ENST00000545831 ITSN2Q9NZM3 1697 aa15.21■□□□□ 0.03
NPIPA1-208ENST00000545831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.21■□□□□ 0.02
NPIPA1-208ENST00000545831 ZNF777Q9ULD5 760 aaPredicted RBP15.18■□□□□ 0.02
NPIPA1-208ENST00000545831 PTPN23Q9H3S7 1636 aa15.17■□□□□ 0.02
NPIPA1-208ENST00000545831 TTC37Q6PGP7 1564 aa15.17■□□□□ 0.02
NPIPA1-208ENST00000545831 PLCH2O75038 1416 aa15.17■□□□□ 0.02
NPIPA1-208ENST00000545831 TCOF1Q13428 1488 aaKnown RBP15.16■□□□□ 0.02
NPIPA1-208ENST00000545831 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
NPIPA1-208ENST00000545831 ABCA9Q8IUA7 1624 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms