RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-208ENST00000545831 NISCHQ9Y2I1 1504 aa23.2■■□□□ 1.3
NPIPA1-208ENST00000545831 CCDC180Q9P1Z9 1646 aa20.36■□□□□ 0.85
NPIPA1-208ENST00000545831 ABCC9O60706 1549 aa19.5■□□□□ 0.71
NPIPA1-208ENST00000545831 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
NPIPA1-208ENST00000545831 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
NPIPA1-208ENST00000545831 DCAF1Q9Y4B6 1507 aa19.21■□□□□ 0.67
NPIPA1-208ENST00000545831 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
NPIPA1-208ENST00000545831 NACADO15069 1562 aa19.06■□□□□ 0.64
NPIPA1-208ENST00000545831 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
NPIPA1-208ENST00000545831 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
NPIPA1-208ENST00000545831 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
NPIPA1-208ENST00000545831 UNC13AQ9UPW8 1703 aa18.46■□□□□ 0.55
NPIPA1-208ENST00000545831 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
NPIPA1-208ENST00000545831 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
NPIPA1-208ENST00000545831 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.48
NPIPA1-208ENST00000545831 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
NPIPA1-208ENST00000545831 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
NPIPA1-208ENST00000545831 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
NPIPA1-208ENST00000545831 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
NPIPA1-208ENST00000545831 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
NPIPA1-208ENST00000545831 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
NPIPA1-208ENST00000545831 WIZO95785 1651 aa17.71■□□□□ 0.43
NPIPA1-208ENST00000545831 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
NPIPA1-208ENST00000545831 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
NPIPA1-208ENST00000545831 ATAD2BQ9ULI0 1458 aa17.68■□□□□ 0.42
NPIPA1-208ENST00000545831 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
NPIPA1-208ENST00000545831 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
NPIPA1-208ENST00000545831 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
NPIPA1-208ENST00000545831 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
NPIPA1-208ENST00000545831 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
NPIPA1-208ENST00000545831 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
NPIPA1-208ENST00000545831 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
NPIPA1-208ENST00000545831 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
NPIPA1-208ENST00000545831 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
NPIPA1-208ENST00000545831 CFTRP13569 1480 aa17.12■□□□□ 0.33
NPIPA1-208ENST00000545831 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
NPIPA1-208ENST00000545831 NESP48681 1621 aa17■□□□□ 0.31
NPIPA1-208ENST00000545831 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
NPIPA1-208ENST00000545831 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
NPIPA1-208ENST00000545831 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.3
NPIPA1-208ENST00000545831 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
NPIPA1-208ENST00000545831 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
NPIPA1-208ENST00000545831 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
NPIPA1-208ENST00000545831 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
NPIPA1-208ENST00000545831 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
NPIPA1-208ENST00000545831 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
NPIPA1-208ENST00000545831 KIF21AQ7Z4S6 1674 aa16.77■□□□□ 0.28
NPIPA1-208ENST00000545831 SYNJ1O43426 1573 aa16.75■□□□□ 0.27
NPIPA1-208ENST00000545831 CUX1P39880 1505 aa16.75■□□□□ 0.27
NPIPA1-208ENST00000545831 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
NPIPA1-208ENST00000545831 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
NPIPA1-208ENST00000545831 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
NPIPA1-208ENST00000545831 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
NPIPA1-208ENST00000545831 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
NPIPA1-208ENST00000545831 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
NPIPA1-208ENST00000545831 FGD5Q6ZNL6 1462 aa16.63■□□□□ 0.25
NPIPA1-208ENST00000545831 WDR62O43379 1518 aa16.61■□□□□ 0.25
NPIPA1-208ENST00000545831 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
NPIPA1-208ENST00000545831 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
NPIPA1-208ENST00000545831 SOGA1O94964 1423 aa16.58■□□□□ 0.24
NPIPA1-208ENST00000545831 EEA1Q15075 1411 aa16.54■□□□□ 0.24
NPIPA1-208ENST00000545831 FAM9AQ8IZU1 332 aaPredicted RBP16.54■□□□□ 0.24
NPIPA1-208ENST00000545831 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.23
NPIPA1-208ENST00000545831 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
NPIPA1-208ENST00000545831 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
NPIPA1-208ENST00000545831 CUX2O14529 1486 aa16.49■□□□□ 0.23
NPIPA1-208ENST00000545831 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
NPIPA1-208ENST00000545831 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
NPIPA1-208ENST00000545831 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
NPIPA1-208ENST00000545831 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
NPIPA1-208ENST00000545831 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
NPIPA1-208ENST00000545831 WDR97A6NE52 1622 aa16.4■□□□□ 0.22
NPIPA1-208ENST00000545831 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
NPIPA1-208ENST00000545831 IGF1RP08069 1367 aa16.36■□□□□ 0.21
NPIPA1-208ENST00000545831 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
NPIPA1-208ENST00000545831 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
NPIPA1-208ENST00000545831 ZNF608Q9ULD9 1512 aaPredicted RBP16.34■□□□□ 0.21
NPIPA1-208ENST00000545831 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
NPIPA1-208ENST00000545831 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
NPIPA1-208ENST00000545831 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
NPIPA1-208ENST00000545831 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
NPIPA1-208ENST00000545831 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
NPIPA1-208ENST00000545831 PRXQ9BXM0 1461 aa16.28■□□□□ 0.2
NPIPA1-208ENST00000545831 EIF4G3O43432 1585 aaKnown RBP16.27■□□□□ 0.2
NPIPA1-208ENST00000545831 KIF21BO75037 1637 aa16.27■□□□□ 0.19
NPIPA1-208ENST00000545831 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
NPIPA1-208ENST00000545831 CUL7Q14999 1698 aa16.24■□□□□ 0.19
NPIPA1-208ENST00000545831 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
NPIPA1-208ENST00000545831 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
NPIPA1-208ENST00000545831 RAPGEF2Q9Y4G8 1499 aa16.23■□□□□ 0.19
NPIPA1-208ENST00000545831 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
NPIPA1-208ENST00000545831 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
NPIPA1-208ENST00000545831 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
NPIPA1-208ENST00000545831 TNIKQ9UKE5 1360 aa16.16■□□□□ 0.18
NPIPA1-208ENST00000545831 ADAMTS12P58397 1594 aa16.16■□□□□ 0.18
NPIPA1-208ENST00000545831 CHMP7Q8WUX9 453 aaPredicted RBP16.15■□□□□ 0.18
NPIPA1-208ENST00000545831 SYNJ2O15056 1496 aa16.12■□□□□ 0.17
NPIPA1-208ENST00000545831 FBLN2P98095 1184 aa16.12■□□□□ 0.17
NPIPA1-208ENST00000545831 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
NPIPA1-208ENST00000545831 CEP162Q5TB80 1403 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms