RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 ARAP1Q96P48 1450 aa28.5■■■□□ 2.15
MSLN-202ENST00000545450 AQRO60306 1485 aaKnown RBP eCLIP28.48■■■□□ 2.15
MSLN-202ENST00000545450 NEUROD1Q13562 356 aa28.46■■■□□ 2.15
MSLN-202ENST00000545450 ARHGAP35Q9NRY4 1499 aa28.45■■■□□ 2.14
MSLN-202ENST00000545450 ZNF608Q9ULD9 1512 aaPredicted RBP28.45■■■□□ 2.14
MSLN-202ENST00000545450 CTTNBP2Q8WZ74 1663 aa28.43■■■□□ 2.14
MSLN-202ENST00000545450 DIEXFQ68CQ4 756 aaKnown RBP28.41■■■□□ 2.14
MSLN-202ENST00000545450 GRIN2BQ13224 1484 aa28.36■■■□□ 2.13
MSLN-202ENST00000545450 EIF4G3O43432 1585 aaKnown RBP28.35■■■□□ 2.13
MSLN-202ENST00000545450 ADAMTS12P58397 1594 aa28.34■■■□□ 2.13
MSLN-202ENST00000545450 TTBK1Q5TCY1 1321 aaPredicted RBP28.32■■■□□ 2.12
MSLN-202ENST00000545450 CENPBP07199 599 aaPredicted RBP28.31■■■□□ 2.12
MSLN-202ENST00000545450 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
MSLN-202ENST00000545450 GTF3C3Q9Y5Q9 886 aa28.23■■■□□ 2.11
MSLN-202ENST00000545450 SNAPC4Q5SXM2 1469 aa28.2■■■□□ 2.1
MSLN-202ENST00000545450 EFCAB5A4FU69 1503 aa28.2■■■□□ 2.1
MSLN-202ENST00000545450 APLP2Q06481 763 aa28.18■■■□□ 2.1
MSLN-202ENST00000545450 P3H3Q8IVL6 736 aa28.13■■■□□ 2.09
MSLN-202ENST00000545450 FHOD3Q2V2M9 1422 aa28.12■■■□□ 2.09
MSLN-202ENST00000545450 SAMD9Q5K651 1589 aa28.12■■■□□ 2.09
MSLN-202ENST00000545450 MAGI1Q96QZ7 1491 aaPredicted RBP28.09■■■□□ 2.09
MSLN-202ENST00000545450 ZNF316A6NFI3 1004 aaPredicted RBP28.08■■■□□ 2.09
MSLN-202ENST00000545450 IQGAP2Q13576 1575 aa28.06■■■□□ 2.08
MSLN-202ENST00000545450 PCF11O94913 1555 aaKnown RBP28.06■■■□□ 2.08
MSLN-202ENST00000545450 GRIN2AQ12879 1464 aa28.05■■■□□ 2.08
MSLN-202ENST00000545450 KANK4Q5T7N3 995 aaPredicted RBP28.01■■■□□ 2.08
MSLN-202ENST00000545450 SYNJ2O15056 1496 aa28■■■□□ 2.07
MSLN-202ENST00000545450 TIAM1Q13009 1591 aa27.97■■■□□ 2.07
MSLN-202ENST00000545450 MAP3K1Q13233 1512 aa27.96■■■□□ 2.07
MSLN-202ENST00000545450 FYCO1Q9BQS8 1478 aa27.94■■■□□ 2.06
MSLN-202ENST00000545450 FMN1Q68DA7 1419 aa27.93■■■□□ 2.06
MSLN-202ENST00000545450 CFAP43Q8NDM7 1665 aa27.93■■■□□ 2.06
MSLN-202ENST00000545450 KIAA0586Q9BVV6 1533 aa27.93■■■□□ 2.06
MSLN-202ENST00000545450 CASKIN1Q8WXD9 1431 aa27.92■■■□□ 2.06
MSLN-202ENST00000545450 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
MSLN-202ENST00000545450 CHMP7Q8WUX9 453 aaPredicted RBP27.9■■■□□ 2.06
MSLN-202ENST00000545450 UGGT2Q9NYU1 1516 aa27.9■■■□□ 2.06
MSLN-202ENST00000545450 MYT1Q01538 1121 aa27.86■■■□□ 2.05
MSLN-202ENST00000545450 FBLN2P98095 1184 aa27.84■■■□□ 2.05
MSLN-202ENST00000545450 LRRIQ1Q96JM4 1722 aa27.83■■■□□ 2.05
MSLN-202ENST00000545450 ATP1B4Q9UN42 357 aaPredicted RBP27.83■■■□□ 2.05
MSLN-202ENST00000545450 LRRC9Q6ZRR7 1453 aa27.82■■■□□ 2.04
MSLN-202ENST00000545450 NUP160Q12769 1436 aa27.81■■■□□ 2.04
MSLN-202ENST00000545450 KIAA0556O60303 1618 aa27.79■■■□□ 2.04
MSLN-202ENST00000545450 DISP1Q96F81 1524 aa27.78■■■□□ 2.04
MSLN-202ENST00000545450 CHD1O14646 1710 aa27.73■■■□□ 2.03
MSLN-202ENST00000545450 MIER1Q8N108 512 aa27.73■■■□□ 2.03
MSLN-202ENST00000545450 RRBP1Q9P2E9 1410 aaKnown RBP27.71■■■□□ 2.03
MSLN-202ENST00000545450 HNRNPUL2Q1KMD3 747 aaKnown RBP27.7■■■□□ 2.03
MSLN-202ENST00000545450 YTHDC1Q96MU7 727 aaKnown RBP27.68■■■□□ 2.02
MSLN-202ENST00000545450 HECW1Q76N89 1606 aa27.67■■■□□ 2.02
MSLN-202ENST00000545450 PHLDB1Q86UU1 1377 aa27.61■■■□□ 2.01
MSLN-202ENST00000545450 JPH4Q96JJ6 628 aa27.6■■■□□ 2.01
MSLN-202ENST00000545450 CCNB3Q8WWL7 1395 aa27.6■■■□□ 2.01
MSLN-202ENST00000545450 CCDC18Q5T9S5 1454 aa27.59■■■□□ 2.01
MSLN-202ENST00000545450 EPRSP07814 1512 aaKnown RBP27.56■■■□□ 2
MSLN-202ENST00000545450 MTUS2Q5JR59 1369 aa27.55■■■□□ 2
MSLN-202ENST00000545450 RAPGEF6Q8TEU7 1601 aa27.54■■■□□ 2
MSLN-202ENST00000545450 MAGI3Q5TCQ9 1506 aa27.54■■■□□ 2
MSLN-202ENST00000545450 CARMIL2Q6F5E8 1435 aa27.54■■■□□ 2
MSLN-202ENST00000545450 CDK13Q14004 1512 aaKnown RBP27.53■■■□□ 2
MSLN-202ENST00000545450 EHBP1L1Q8N3D4 1523 aa27.52■■■□□ 2
MSLN-202ENST00000545450 SUPT6HQ7KZ85 1726 aaKnown RBP27.48■■□□□ 1.99
MSLN-202ENST00000545450 NUP153P49790 1475 aaKnown RBP27.48■■□□□ 1.99
MSLN-202ENST00000545450 CLSPNQ9HAW4 1339 aa27.45■■□□□ 1.99
MSLN-202ENST00000545450 ARID3CA6NKF2 412 aa27.44■■□□□ 1.98
MSLN-202ENST00000545450 NCOA2Q15596 1464 aa27.44■■□□□ 1.98
MSLN-202ENST00000545450 PLB1Q6P1J6 1458 aa27.44■■□□□ 1.98
MSLN-202ENST00000545450 SHROOM2Q13796 1616 aa27.44■■□□□ 1.98
MSLN-202ENST00000545450 PRG4Q92954 1404 aaPredicted RBP27.43■■□□□ 1.98
MSLN-202ENST00000545450 ARHGEF11O15085 1522 aa27.4■■□□□ 1.98
MSLN-202ENST00000545450 FGD6Q6ZV73 1430 aa27.37■■□□□ 1.97
MSLN-202ENST00000545450 ITGAEP38570 1179 aa27.36■■□□□ 1.97
MSLN-202ENST00000545450 ABCA8O94911 1581 aa27.35■■□□□ 1.97
MSLN-202ENST00000545450 FAM50AQ14320 339 aaKnown RBP27.35■■□□□ 1.97
MSLN-202ENST00000545450 CLASP1Q7Z460 1538 aa27.34■■□□□ 1.97
MSLN-202ENST00000545450 MYOM3Q5VTT5 1437 aa27.33■■□□□ 1.97
MSLN-202ENST00000545450 DHX57Q6P158 1386 aaKnown RBP27.33■■□□□ 1.96
MSLN-202ENST00000545450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.31■■□□□ 1.96
MSLN-202ENST00000545450 ERCC6L2Q5T890 1561 aa27.3■■□□□ 1.96
MSLN-202ENST00000545450 PTPRGP23470 1445 aa27.26■■□□□ 1.95
MSLN-202ENST00000545450 PTPN23Q9H3S7 1636 aa27.24■■□□□ 1.95
MSLN-202ENST00000545450 CDK11AQ9UQ88 783 aaPredicted RBP27.2■■□□□ 1.94
MSLN-202ENST00000545450 TROQ12816 1431 aaPredicted RBP27.19■■□□□ 1.94
MSLN-202ENST00000545450 ATP10BO94823 1461 aa27.18■■□□□ 1.94
MSLN-202ENST00000545450 ADCY10Q96PN6 1610 aa27.16■■□□□ 1.94
MSLN-202ENST00000545450 TCOF1Q13428 1488 aaKnown RBP27.16■■□□□ 1.94
MSLN-202ENST00000545450 KIF14Q15058 1648 aa27.15■■□□□ 1.94
MSLN-202ENST00000545450 RAB3GAP2Q9H2M9 1393 aa27.14■■□□□ 1.94
MSLN-202ENST00000545450 MIA2Q96PC5 1412 aa27.13■■□□□ 1.93
MSLN-202ENST00000545450 PTPRKQ15262 1439 aa27.12■■□□□ 1.93
MSLN-202ENST00000545450 SETD5Q9C0A6 1442 aa27.12■■□□□ 1.93
MSLN-202ENST00000545450 UACAQ9BZF9 1416 aa27.12■■□□□ 1.93
MSLN-202ENST00000545450 SUPT16HQ9Y5B9 1047 aaKnown RBP27.09■■□□□ 1.93
MSLN-202ENST00000545450 ABCC2Q92887 1545 aa27.05■■□□□ 1.92
MSLN-202ENST00000545450 ITSN2Q9NZM3 1697 aa27.04■■□□□ 1.92
MSLN-202ENST00000545450 PLEKHD1A6NEE1 506 aa27.03■■□□□ 1.92
MSLN-202ENST00000545450 GPATCH8Q9UKJ3 1502 aaKnown RBP27■■□□□ 1.91
MSLN-202ENST00000545450 CDC42BPAQ5VT25 1732 aa26.98■■□□□ 1.91
MSLN-202ENST00000545450 HFM1A2PYH4 1435 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms