RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 NISCHQ9Y2I1 1504 aa40.93■■■■■ 4.14
MSLN-202ENST00000545450 CCDC180Q9P1Z9 1646 aa35.59■■■■□ 3.29
MSLN-202ENST00000545450 ZCCHC6Q5VYS8 1495 aaKnown RBP34.43■■■■□ 3.1
MSLN-202ENST00000545450 DCAF1Q9Y4B6 1507 aa33.78■■■■□ 3
MSLN-202ENST00000545450 DCAF8L2P0C7V8 631 aa33.77■■■■□ 3
MSLN-202ENST00000545450 SHROOM4Q9ULL8 1493 aa33.63■■■□□ 2.97
MSLN-202ENST00000545450 ABCC9O60706 1549 aa33.55■■■□□ 2.96
MSLN-202ENST00000545450 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
MSLN-202ENST00000545450 NACADO15069 1562 aa33.07■■■□□ 2.88
MSLN-202ENST00000545450 SCRIBQ14160 1630 aa32.84■■■□□ 2.85
MSLN-202ENST00000545450 RB1CC1Q8TDY2 1594 aa32.76■■■□□ 2.83
MSLN-202ENST00000545450 SUPT5HO00267 1087 aaKnown RBP32.4■■■□□ 2.78
MSLN-202ENST00000545450 UNC13AQ9UPW8 1703 aa32.27■■■□□ 2.76
MSLN-202ENST00000545450 CECR2Q9BXF3 1484 aa31.85■■■□□ 2.69
MSLN-202ENST00000545450 BICRAQ9NZM4 1560 aa31.85■■■□□ 2.69
MSLN-202ENST00000545450 RSF1Q96T23 1441 aaPredicted RBP31.84■■■□□ 2.69
MSLN-202ENST00000545450 PABPN1Q86U42 306 aaKnown RBP eCLIP31.68■■■□□ 2.66
MSLN-202ENST00000545450 MROH2BQ7Z745 1585 aa31.68■■■□□ 2.66
MSLN-202ENST00000545450 BAZ1AQ9NRL2 1556 aaPredicted RBP31.57■■■□□ 2.64
MSLN-202ENST00000545450 WIZO95785 1651 aa31.47■■■□□ 2.63
MSLN-202ENST00000545450 SMARCA4P51532 1647 aa31.46■■■□□ 2.63
MSLN-202ENST00000545450 HRCP23327 699 aa31.16■■■□□ 2.58
MSLN-202ENST00000545450 CHIC1Q5VXU3 224 aa31.15■■■□□ 2.58
MSLN-202ENST00000545450 TOP2AP11388 1531 aaKnown RBP31.07■■■□□ 2.56
MSLN-202ENST00000545450 PEG3Q9GZU2 1588 aa31.02■■■□□ 2.56
MSLN-202ENST00000545450 ATAD2BQ9ULI0 1458 aa30.86■■■□□ 2.53
MSLN-202ENST00000545450 EIF4G1Q04637 1599 aaKnown RBP30.85■■■□□ 2.53
MSLN-202ENST00000545450 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
MSLN-202ENST00000545450 CCDC88BA6NC98 1476 aa30.77■■■□□ 2.52
MSLN-202ENST00000545450 BAZ1BQ9UIG0 1483 aaKnown RBP30.69■■■□□ 2.5
MSLN-202ENST00000545450 PCGF6Q9BYE7 350 aa30.68■■■□□ 2.5
MSLN-202ENST00000545450 NCAPD3P42695 1498 aa30.52■■■□□ 2.48
MSLN-202ENST00000545450 HMGXB3Q12766 1538 aa30.51■■■□□ 2.48
MSLN-202ENST00000545450 TRIM41Q8WV44 630 aa30.39■■■□□ 2.46
MSLN-202ENST00000545450 CC2D2AQ9P2K1 1620 aa30.36■■■□□ 2.45
MSLN-202ENST00000545450 PPARGC1BQ86YN6 1023 aaKnown RBP30.33■■■□□ 2.45
MSLN-202ENST00000545450 ABCC8Q09428 1581 aa30.26■■■□□ 2.43
MSLN-202ENST00000545450 LOC105371045A0A1W2PR82 267 aa30.21■■■□□ 2.43
MSLN-202ENST00000545450 TRIM26Q12899 539 aaPredicted RBP30.04■■■□□ 2.4
MSLN-202ENST00000545450 WRNQ14191 1432 aaPredicted RBP eCLIP29.94■■■□□ 2.38
MSLN-202ENST00000545450 CFTRP13569 1480 aa29.93■■■□□ 2.38
MSLN-202ENST00000545450 FAM9AQ8IZU1 332 aaPredicted RBP29.92■■■□□ 2.38
MSLN-202ENST00000545450 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
MSLN-202ENST00000545450 PRDM2Q13029 1718 aa29.85■■■□□ 2.37
MSLN-202ENST00000545450 CADPSQ9ULU8 1353 aa29.76■■■□□ 2.35
MSLN-202ENST00000545450 TOP2BQ02880 1626 aa29.7■■■□□ 2.35
MSLN-202ENST00000545450 SOGA1O94964 1423 aa29.7■■■□□ 2.34
MSLN-202ENST00000545450 BIVM-ERCC5R4GMW8 1640 aa29.68■■■□□ 2.34
MSLN-202ENST00000545450 ZEB1P37275 1124 aaPredicted RBP29.66■■■□□ 2.34
MSLN-202ENST00000545450 DNAJC5BQ9UF47 199 aa29.62■■■□□ 2.33
MSLN-202ENST00000545450 RUSC2Q8N2Y8 1516 aa29.61■■■□□ 2.33
MSLN-202ENST00000545450 CUX1P39880 1505 aa29.6■■■□□ 2.33
MSLN-202ENST00000545450 EHMT2Q96KQ7 1210 aa29.55■■■□□ 2.32
MSLN-202ENST00000545450 NESP48681 1621 aa29.55■■■□□ 2.32
MSLN-202ENST00000545450 EEA1Q15075 1411 aa29.55■■■□□ 2.32
MSLN-202ENST00000545450 FANCD2Q9BXW9 1451 aa29.47■■■□□ 2.31
MSLN-202ENST00000545450 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
MSLN-202ENST00000545450 CSRNP3Q8WYN3 585 aa29.42■■■□□ 2.3
MSLN-202ENST00000545450 CEP164Q9UPV0 1460 aa29.25■■■□□ 2.27
MSLN-202ENST00000545450 KIF21BO75037 1637 aa29.24■■■□□ 2.27
MSLN-202ENST00000545450 DNMBPQ6XZF7 1577 aa29.24■■■□□ 2.27
MSLN-202ENST00000545450 FGD5Q6ZNL6 1462 aa29.23■■■□□ 2.27
MSLN-202ENST00000545450 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
MSLN-202ENST00000545450 GOLGA3Q08378 1498 aa29.21■■■□□ 2.27
MSLN-202ENST00000545450 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.26
MSLN-202ENST00000545450 TOPBP1Q92547 1522 aa29.19■■■□□ 2.26
MSLN-202ENST00000545450 PELP1Q8IZL8 1130 aaKnown RBP29.15■■■□□ 2.26
MSLN-202ENST00000545450 KIF27Q86VH2 1401 aa29.14■■■□□ 2.26
MSLN-202ENST00000545450 TNIKQ9UKE5 1360 aa29.14■■■□□ 2.26
MSLN-202ENST00000545450 URB2Q14146 1524 aaKnown RBP29.12■■■□□ 2.25
MSLN-202ENST00000545450 UBTFP17480 764 aaKnown RBP29.08■■■□□ 2.25
MSLN-202ENST00000545450 RAPGEF2Q9Y4G8 1499 aa29.08■■■□□ 2.25
MSLN-202ENST00000545450 CUX2O14529 1486 aa29.07■■■□□ 2.24
MSLN-202ENST00000545450 POLA1P09884 1462 aaPredicted RBP29.07■■■□□ 2.24
MSLN-202ENST00000545450 CEP162Q5TB80 1403 aa29.05■■■□□ 2.24
MSLN-202ENST00000545450 PRXQ9BXM0 1461 aa29.03■■■□□ 2.24
MSLN-202ENST00000545450 SCAF1Q9H7N4 1312 aaKnown RBP29.02■■■□□ 2.24
MSLN-202ENST00000545450 RAD54L2Q9Y4B4 1467 aa29■■■□□ 2.23
MSLN-202ENST00000545450 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
MSLN-202ENST00000545450 ABCA10Q8WWZ4 1543 aa28.95■■■□□ 2.22
MSLN-202ENST00000545450 WDR97A6NE52 1622 aa28.91■■■□□ 2.22
MSLN-202ENST00000545450 IGF1RP08069 1367 aa28.89■■■□□ 2.22
MSLN-202ENST00000545450 MRC2Q9UBG0 1479 aa28.85■■■□□ 2.21
MSLN-202ENST00000545450 CLIP1P30622 1438 aa28.76■■■□□ 2.19
MSLN-202ENST00000545450 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
MSLN-202ENST00000545450 ABCA5Q8WWZ7 1642 aa28.74■■■□□ 2.19
MSLN-202ENST00000545450 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
MSLN-202ENST00000545450 WDR62O43379 1518 aa28.72■■■□□ 2.19
MSLN-202ENST00000545450 ERCC6Q03468 1493 aa28.69■■■□□ 2.18
MSLN-202ENST00000545450 TDRD9Q8NDG6 1382 aaKnown RBP28.68■■■□□ 2.18
MSLN-202ENST00000545450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.67■■■□□ 2.18
MSLN-202ENST00000545450 CUL7Q14999 1698 aa28.66■■■□□ 2.18
MSLN-202ENST00000545450 CCER1Q8TC90 406 aaPredicted RBP28.64■■■□□ 2.17
MSLN-202ENST00000545450 RANGAP1P46060 587 aaPredicted RBP28.63■■■□□ 2.17
MSLN-202ENST00000545450 GAPVD1Q14C86 1478 aa28.63■■■□□ 2.17
MSLN-202ENST00000545450 THOC2Q8NI27 1593 aaKnown RBP28.63■■■□□ 2.17
MSLN-202ENST00000545450 ACIN1Q9UKV3 1341 aaKnown RBP28.58■■■□□ 2.17
MSLN-202ENST00000545450 VPS8Q8N3P4 1428 aa28.53■■■□□ 2.16
MSLN-202ENST00000545450 PBRM1Q86U86 1689 aa28.53■■■□□ 2.16
MSLN-202ENST00000545450 IFT140Q96RY7 1462 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms