RNA–Protein interactions for RNA: ENST00000545180.5

SPHK1-203, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SPHK1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-203ENST00000545180 TARBP1Q13395 1621 aaKnown RBP30.36■■■□□ 2.45
SPHK1-203ENST00000545180 TIAM1Q13009 1591 aa30.36■■■□□ 2.45
SPHK1-203ENST00000545180 EFCAB5A4FU69 1503 aa30.36■■■□□ 2.45
SPHK1-203ENST00000545180 P3H3Q8IVL6 736 aa30.31■■■□□ 2.44
SPHK1-203ENST00000545180 MRC2Q9UBG0 1479 aa30.3■■■□□ 2.44
SPHK1-203ENST00000545180 FHOD3Q2V2M9 1422 aa30.28■■■□□ 2.44
SPHK1-203ENST00000545180 PCF11O94913 1555 aaKnown RBP30.26■■■□□ 2.43
SPHK1-203ENST00000545180 CCNB3Q8WWL7 1395 aa30.24■■■□□ 2.43
SPHK1-203ENST00000545180 LRRC9Q6ZRR7 1453 aa30.24■■■□□ 2.43
SPHK1-203ENST00000545180 AQRO60306 1485 aaKnown RBP eCLIP30.2■■■□□ 2.432e-14■■■■■ 57.5
SPHK1-203ENST00000545180 CFAP43Q8NDM7 1665 aa30.2■■■□□ 2.42
SPHK1-203ENST00000545180 FYCO1Q9BQS8 1478 aa30.19■■■□□ 2.42
SPHK1-203ENST00000545180 CASKIN1Q8WXD9 1431 aa30.18■■■□□ 2.42
SPHK1-203ENST00000545180 FMN1Q68DA7 1419 aa30.13■■■□□ 2.41
SPHK1-203ENST00000545180 PBRM1Q86U86 1689 aa30.13■■■□□ 2.41
SPHK1-203ENST00000545180 SAMD9Q5K651 1589 aa30.12■■■□□ 2.41
SPHK1-203ENST00000545180 ATP1B4Q9UN42 357 aaPredicted RBP30.1■■■□□ 2.41
SPHK1-203ENST00000545180 WDR62O43379 1518 aa30.09■■■□□ 2.41
SPHK1-203ENST00000545180 PHLDB1Q86UU1 1377 aa30.06■■■□□ 2.4
SPHK1-203ENST00000545180 IFT140Q96RY7 1462 aa30.06■■■□□ 2.4
SPHK1-203ENST00000545180 SNAPC4Q5SXM2 1469 aa30.05■■■□□ 2.4
SPHK1-203ENST00000545180 GRIN2BQ13224 1484 aa30.04■■■□□ 2.4
SPHK1-203ENST00000545180 DHX57Q6P158 1386 aaKnown RBP30.03■■■□□ 2.4
SPHK1-203ENST00000545180 ADAMTS12P58397 1594 aa30.03■■■□□ 2.4
SPHK1-203ENST00000545180 CLSPNQ9HAW4 1339 aa30.03■■■□□ 2.4
SPHK1-203ENST00000545180 ITGAEP38570 1179 aa29.96■■■□□ 2.39
SPHK1-203ENST00000545180 ZNF608Q9ULD9 1512 aaPredicted RBP29.96■■■□□ 2.39
SPHK1-203ENST00000545180 ERCC6Q03468 1493 aa29.91■■■□□ 2.38
SPHK1-203ENST00000545180 ZNF316A6NFI3 1004 aaPredicted RBP29.91■■■□□ 2.38
SPHK1-203ENST00000545180 IQGAP2Q13576 1575 aa29.9■■■□□ 2.38
SPHK1-203ENST00000545180 DIEXFQ68CQ4 756 aaKnown RBP29.88■■■□□ 2.37
SPHK1-203ENST00000545180 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
SPHK1-203ENST00000545180 FAM50AQ14320 339 aaKnown RBP29.86■■■□□ 2.37
SPHK1-203ENST00000545180 LRRIQ1Q96JM4 1722 aa29.84■■■□□ 2.37
SPHK1-203ENST00000545180 MTUS2Q5JR59 1369 aa29.83■■■□□ 2.37
SPHK1-203ENST00000545180 RAB3GAP2Q9H2M9 1393 aa29.83■■■□□ 2.37
SPHK1-203ENST00000545180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.83■■■□□ 2.373e-6■■□□□ 11.8
SPHK1-203ENST00000545180 EIF4G3O43432 1585 aaKnown RBP29.8■■■□□ 2.36
SPHK1-203ENST00000545180 SETD5Q9C0A6 1442 aa29.79■■■□□ 2.36
SPHK1-203ENST00000545180 UGGT2Q9NYU1 1516 aa29.76■■■□□ 2.35
SPHK1-203ENST00000545180 FGD6Q6ZV73 1430 aa29.75■■■□□ 2.35
SPHK1-203ENST00000545180 KIAA0586Q9BVV6 1533 aa29.72■■■□□ 2.35
SPHK1-203ENST00000545180 CCDC18Q5T9S5 1454 aa29.72■■■□□ 2.35
SPHK1-203ENST00000545180 EHBP1L1Q8N3D4 1523 aa29.71■■■□□ 2.35
SPHK1-203ENST00000545180 GRIN2AQ12879 1464 aa29.7■■■□□ 2.35
SPHK1-203ENST00000545180 HECW1Q76N89 1606 aa29.7■■■□□ 2.34
SPHK1-203ENST00000545180 NCOA2Q15596 1464 aa29.7■■■□□ 2.34
SPHK1-203ENST00000545180 SUPT6HQ7KZ85 1726 aaKnown RBP29.67■■■□□ 2.34
SPHK1-203ENST00000545180 MAGI1Q96QZ7 1491 aaPredicted RBP29.66■■■□□ 2.34
SPHK1-203ENST00000545180 MYOM3Q5VTT5 1437 aa29.65■■■□□ 2.34
SPHK1-203ENST00000545180 MAGI3Q5TCQ9 1506 aa29.63■■■□□ 2.33
SPHK1-203ENST00000545180 EPRSP07814 1512 aaKnown RBP29.62■■■□□ 2.33
SPHK1-203ENST00000545180 MAPKBP1O60336 1514 aa29.61■■■□□ 2.33
SPHK1-203ENST00000545180 ARHGEF11O15085 1522 aa29.6■■■□□ 2.33
SPHK1-203ENST00000545180 DISP1Q96F81 1524 aa29.6■■■□□ 2.33
SPHK1-203ENST00000545180 KIAA0556O60303 1618 aa29.59■■■□□ 2.33
SPHK1-203ENST00000545180 SYNJ2O15056 1496 aa29.58■■■□□ 2.33
SPHK1-203ENST00000545180 CHMP7Q8WUX9 453 aaPredicted RBP29.54■■■□□ 2.32
SPHK1-203ENST00000545180 CDK13Q14004 1512 aaKnown RBP29.52■■■□□ 2.32
SPHK1-203ENST00000545180 PTPRKQ15262 1439 aa29.5■■■□□ 2.31
SPHK1-203ENST00000545180 CEP170Q5SW79 1584 aa29.49■■■□□ 2.31
SPHK1-203ENST00000545180 PTPN23Q9H3S7 1636 aa29.48■■■□□ 2.31
SPHK1-203ENST00000545180 HFM1A2PYH4 1435 aa29.46■■■□□ 2.31
SPHK1-203ENST00000545180 TCOF1Q13428 1488 aaKnown RBP29.43■■■□□ 2.3
SPHK1-203ENST00000545180 FBLN2P98095 1184 aa29.43■■■□□ 2.3
SPHK1-203ENST00000545180 NUP160Q12769 1436 aa29.42■■■□□ 2.3
SPHK1-203ENST00000545180 ARID3CA6NKF2 412 aa29.41■■■□□ 2.3
SPHK1-203ENST00000545180 RAPGEF6Q8TEU7 1601 aa29.4■■■□□ 2.3
SPHK1-203ENST00000545180 NUP153P49790 1475 aaKnown RBP29.4■■■□□ 2.3
SPHK1-203ENST00000545180 MIA2Q96PC5 1412 aa29.37■■■□□ 2.29
SPHK1-203ENST00000545180 NAIPQ13075 1403 aa29.36■■■□□ 2.29
SPHK1-203ENST00000545180 SIN3AQ96ST3 1273 aa29.33■■■□□ 2.29
SPHK1-203ENST00000545180 JPH4Q96JJ6 628 aa29.32■■■□□ 2.28
SPHK1-203ENST00000545180 CARMIL2Q6F5E8 1435 aa29.31■■■□□ 2.28
SPHK1-203ENST00000545180 UACAQ9BZF9 1416 aa29.31■■■□□ 2.28
SPHK1-203ENST00000545180 MIER1Q8N108 512 aa29.3■■■□□ 2.28
SPHK1-203ENST00000545180 TIMELESSQ9UNS1 1208 aa29.29■■■□□ 2.28
SPHK1-203ENST00000545180 CDK11AQ9UQ88 783 aaPredicted RBP29.29■■■□□ 2.28
SPHK1-203ENST00000545180 NEUROD1Q13562 356 aa29.28■■■□□ 2.28
SPHK1-203ENST00000545180 PLB1Q6P1J6 1458 aa29.24■■■□□ 2.27
SPHK1-203ENST00000545180 AKNAQ7Z591 1439 aa29.23■■■□□ 2.27
SPHK1-203ENST00000545180 ACIN1Q9UKV3 1341 aaKnown RBP29.21■■■□□ 2.27
SPHK1-203ENST00000545180 CENPBP07199 599 aaPredicted RBP29.2■■■□□ 2.26
SPHK1-203ENST00000545180 CHIC2Q9UKJ5 165 aa29.2■■■□□ 2.26
SPHK1-203ENST00000545180 GCC2Q8IWJ2 1684 aa29.19■■■□□ 2.26
SPHK1-203ENST00000545180 RRP7BPQ9NSQ0 103 aa29.19■■■□□ 2.26
SPHK1-203ENST00000545180 TROQ12816 1431 aaPredicted RBP29.18■■■□□ 2.26
SPHK1-203ENST00000545180 SCAF1Q9H7N4 1312 aaKnown RBP29.15■■■□□ 2.26
SPHK1-203ENST00000545180 PRG4Q92954 1404 aaPredicted RBP29.15■■■□□ 2.26
SPHK1-203ENST00000545180 DAPK1P53355 1430 aa29.11■■■□□ 2.25
SPHK1-203ENST00000545180 ABCA8O94911 1581 aa29.1■■■□□ 2.25
SPHK1-203ENST00000545180 PPP1R15AO75807 674 aaPredicted RBP29.1■■■□□ 2.25
SPHK1-203ENST00000545180 DNMT1P26358 1616 aaKnown RBP29.08■■■□□ 2.25
SPHK1-203ENST00000545180 ADCY10Q96PN6 1610 aa29.07■■■□□ 2.24
SPHK1-203ENST00000545180 ROCK1Q13464 1354 aa29.07■■■□□ 2.24
SPHK1-203ENST00000545180 ABCC5O15440 1437 aa29.07■■■□□ 2.24
SPHK1-203ENST00000545180 ZNF644Q9H582 1327 aaPredicted RBP29.06■■■□□ 2.24
SPHK1-203ENST00000545180 KDM6BO15054 1643 aa29.05■■■□□ 2.24
SPHK1-203ENST00000545180 TONSLQ96HA7 1378 aa29.04■■■□□ 2.24
SPHK1-203ENST00000545180 KIF14Q15058 1648 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms