RNA–Protein interactions for RNA: ENST00000545111.6

SV2B-203, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 2 BASIC

Gene SV2B, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-203ENST00000545111 MAGI1Q96QZ7 1491 aaPredicted RBP39.65■■■■□ 3.94
SV2B-203ENST00000545111 SYNJ2O15056 1496 aa39.51■■■■□ 3.91
SV2B-203ENST00000545111 GRIN2AQ12879 1464 aa39.51■■■■□ 3.91
SV2B-203ENST00000545111 PPARGC1BQ86YN6 1023 aaKnown RBP39.5■■■■□ 3.91
SV2B-203ENST00000545111 TRIM26Q12899 539 aaPredicted RBP39.46■■■■□ 3.91
SV2B-203ENST00000545111 CHMP7Q8WUX9 453 aaPredicted RBP39.45■■■■□ 3.91
SV2B-203ENST00000545111 EFCAB5A4FU69 1503 aa39.45■■■■□ 3.91
SV2B-203ENST00000545111 PCGF6Q9BYE7 350 aa39.45■■■■□ 3.91
SV2B-203ENST00000545111 IQGAP2Q13576 1575 aa39.38■■■■□ 3.89
SV2B-203ENST00000545111 P3H3Q8IVL6 736 aa39.37■■■■□ 3.89
SV2B-203ENST00000545111 FBLN2P98095 1184 aa39.36■■■■□ 3.89
SV2B-203ENST00000545111 SAMD9Q5K651 1589 aa39.32■■■■□ 3.89
SV2B-203ENST00000545111 KIAA0586Q9BVV6 1533 aa39.32■■■■□ 3.89
SV2B-203ENST00000545111 FHOD3Q2V2M9 1422 aa39.31■■■■□ 3.88
SV2B-203ENST00000545111 APLP2Q06481 763 aa39.31■■■■□ 3.88
SV2B-203ENST00000545111 CEP170Q5SW79 1584 aa39.25■■■■□ 3.87
SV2B-203ENST00000545111 NUP160Q12769 1436 aa39.22■■■■□ 3.87
SV2B-203ENST00000545111 TTBK1Q5TCY1 1321 aaPredicted RBP39.2■■■■□ 3.87
SV2B-203ENST00000545111 UGGT2Q9NYU1 1516 aa39.19■■■■□ 3.86
SV2B-203ENST00000545111 FMN1Q68DA7 1419 aa39.13■■■■□ 3.85
SV2B-203ENST00000545111 PCF11O94913 1555 aaKnown RBP39.08■■■■□ 3.85
SV2B-203ENST00000545111 CHD1O14646 1710 aa39.06■■■■□ 3.84
SV2B-203ENST00000545111 CASKIN1Q8WXD9 1431 aa39.04■■■■□ 3.84
SV2B-203ENST00000545111 FYCO1Q9BQS8 1478 aa39.02■■■■□ 3.84
SV2B-203ENST00000545111 DISP1Q96F81 1524 aa39.01■■■■□ 3.84
SV2B-203ENST00000545111 MAP3K1Q13233 1512 aa38.99■■■■□ 3.83
SV2B-203ENST00000545111 KANK4Q5T7N3 995 aaPredicted RBP38.99■■■■□ 3.83
SV2B-203ENST00000545111 KIAA0556O60303 1618 aa38.97■■■■□ 3.83
SV2B-203ENST00000545111 JPH4Q96JJ6 628 aa38.96■■■■□ 3.83
SV2B-203ENST00000545111 TIAM1Q13009 1591 aa38.95■■■■□ 3.83
SV2B-203ENST00000545111 ATP1B4Q9UN42 357 aaPredicted RBP38.94■■■■□ 3.82
SV2B-203ENST00000545111 CFAP43Q8NDM7 1665 aa38.84■■■■□ 3.81
SV2B-203ENST00000545111 CARMIL2Q6F5E8 1435 aa38.83■■■■□ 3.81
SV2B-203ENST00000545111 LRRC9Q6ZRR7 1453 aa38.78■■■■□ 3.8
SV2B-203ENST00000545111 LRRIQ1Q96JM4 1722 aa38.72■■■■□ 3.79
SV2B-203ENST00000545111 HECW1Q76N89 1606 aa38.7■■■■□ 3.79
SV2B-203ENST00000545111 PRG4Q92954 1404 aaPredicted RBP38.69■■■■□ 3.78
SV2B-203ENST00000545111 SHROOM2Q13796 1616 aa38.66■■■■□ 3.78
SV2B-203ENST00000545111 CCDC18Q5T9S5 1454 aa38.63■■■■□ 3.77
SV2B-203ENST00000545111 CLASP1Q7Z460 1538 aa38.63■■■■□ 3.77
SV2B-203ENST00000545111 EPRSP07814 1512 aaKnown RBP38.59■■■■□ 3.77
SV2B-203ENST00000545111 RAPGEF6Q8TEU7 1601 aa38.58■■■■□ 3.77
SV2B-203ENST00000545111 MTUS2Q5JR59 1369 aa38.53■■■■□ 3.76
SV2B-203ENST00000545111 PLB1Q6P1J6 1458 aa38.52■■■■□ 3.76
SV2B-203ENST00000545111 NUP153P49790 1475 aaKnown RBP38.52■■■■□ 3.76
SV2B-203ENST00000545111 RRBP1Q9P2E9 1410 aaKnown RBP38.5■■■■□ 3.75
SV2B-203ENST00000545111 CDK13Q14004 1512 aaKnown RBP38.49■■■■□ 3.75
SV2B-203ENST00000545111 PTPRGP23470 1445 aa38.46■■■■□ 3.75
SV2B-203ENST00000545111 ARID3CA6NKF2 412 aa38.45■■■■□ 3.75
SV2B-203ENST00000545111 PHLDB1Q86UU1 1377 aa38.45■■■■□ 3.75
SV2B-203ENST00000545111 EHBP1L1Q8N3D4 1523 aa38.44■■■■□ 3.74
SV2B-203ENST00000545111 MAGI3Q5TCQ9 1506 aa38.43■■■■□ 3.74
SV2B-203ENST00000545111 ERCC6L2Q5T890 1561 aa38.42■■■■□ 3.74
SV2B-203ENST00000545111 ABCA8O94911 1581 aa38.42■■■■□ 3.74
SV2B-203ENST00000545111 CCNB3Q8WWL7 1395 aa38.39■■■■□ 3.74
SV2B-203ENST00000545111 HNRNPUL2Q1KMD3 747 aaKnown RBP38.33■■■■□ 3.73
SV2B-203ENST00000545111 OSCARQ8IYS5 282 aa38.33■■■■□ 3.73
SV2B-203ENST00000545111 SUPT6HQ7KZ85 1726 aaKnown RBP38.33■■■■□ 3.73
SV2B-203ENST00000545111 NCOA2Q15596 1464 aa38.31■■■■□ 3.72
SV2B-203ENST00000545111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.3■■■■□ 3.72
SV2B-203ENST00000545111 CDK11AQ9UQ88 783 aaPredicted RBP38.27■■■■□ 3.72
SV2B-203ENST00000545111 ARHGEF11O15085 1522 aa38.24■■■■□ 3.71
SV2B-203ENST00000545111 UACAQ9BZF9 1416 aa38.23■■■■□ 3.71
SV2B-203ENST00000545111 HRCP23327 699 aa38.23■■■■□ 3.71
SV2B-203ENST00000545111 ATP10BO94823 1461 aa38.2■■■■□ 3.71
SV2B-203ENST00000545111 MYOM3Q5VTT5 1437 aa38.16■■■■□ 3.7
SV2B-203ENST00000545111 FGD6Q6ZV73 1430 aa38.16■■■■□ 3.7
SV2B-203ENST00000545111 TROQ12816 1431 aaPredicted RBP38.14■■■■□ 3.7
SV2B-203ENST00000545111 FAM50AQ14320 339 aaKnown RBP38.11■■■■□ 3.69
SV2B-203ENST00000545111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.09■■■■□ 3.69
SV2B-203ENST00000545111 ABCC2Q92887 1545 aa38.09■■■■□ 3.69
SV2B-203ENST00000545111 PLEKHD1A6NEE1 506 aa38.06■■■■□ 3.68
SV2B-203ENST00000545111 ITGAEP38570 1179 aa38.04■■■■□ 3.68
SV2B-203ENST00000545111 UHRF1BP1LA0JNW5 1464 aa38■■■■□ 3.67
SV2B-203ENST00000545111 ADCY10Q96PN6 1610 aa37.99■■■■□ 3.67
SV2B-203ENST00000545111 MIA2Q96PC5 1412 aa37.95■■■■□ 3.67
SV2B-203ENST00000545111 PTPN23Q9H3S7 1636 aa37.94■■■■□ 3.66
SV2B-203ENST00000545111 KIF14Q15058 1648 aa37.94■■■■□ 3.66
SV2B-203ENST00000545111 CCER1Q8TC90 406 aaPredicted RBP37.91■■■■□ 3.66
SV2B-203ENST00000545111 TCOF1Q13428 1488 aaKnown RBP37.9■■■■□ 3.66
SV2B-203ENST00000545111 KDM5BQ9UGL1 1544 aa37.87■■■■□ 3.65
SV2B-203ENST00000545111 ZCCHC11Q5TAX3 1644 aaKnown RBP37.82■■■■□ 3.65
SV2B-203ENST00000545111 GPATCH8Q9UKJ3 1502 aaKnown RBP37.81■■■■□ 3.64
SV2B-203ENST00000545111 ZEB1P37275 1124 aaPredicted RBP37.81■■■■□ 3.64
SV2B-203ENST00000545111 ABCC10Q5T3U5 1492 aa37.81■■■■□ 3.64
SV2B-203ENST00000545111 ITSN2Q9NZM3 1697 aa37.78■■■■□ 3.64
SV2B-203ENST00000545111 PTPRKQ15262 1439 aa37.74■■■■□ 3.63
SV2B-203ENST00000545111 CFDP1Q9UEE9 299 aaPredicted RBP37.73■■■■□ 3.63
SV2B-203ENST00000545111 SETD5Q9C0A6 1442 aa37.69■■■■□ 3.62
SV2B-203ENST00000545111 CDC42BPAQ5VT25 1732 aa37.69■■■■□ 3.62
SV2B-203ENST00000545111 ZNF644Q9H582 1327 aaPredicted RBP37.68■■■■□ 3.62
SV2B-203ENST00000545111 RAB3GAP2Q9H2M9 1393 aa37.66■■■■□ 3.62
SV2B-203ENST00000545111 CAMSAP2Q08AD1 1489 aa37.62■■■■□ 3.61
SV2B-203ENST00000545111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.6■■■■□ 3.61
SV2B-203ENST00000545111 KCNH8Q96L42 1107 aa37.6■■■■□ 3.61
SV2B-203ENST00000545111 ZNF777Q9ULD5 760 aaPredicted RBP37.59■■■■□ 3.61
SV2B-203ENST00000545111 TTC37Q6PGP7 1564 aa37.57■■■■□ 3.6
SV2B-203ENST00000545111 DNMT1P26358 1616 aaKnown RBP37.56■■■■□ 3.6
SV2B-203ENST00000545111 HFM1A2PYH4 1435 aa37.56■■■■□ 3.6
SV2B-203ENST00000545111 DAPK1P53355 1430 aa37.56■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms