RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 FGD5Q6ZNL6 1462 aa12.43□□□□□ -0.42
NECAP1-207ENST00000544891 WDR97A6NE52 1622 aa12.42□□□□□ -0.42
NECAP1-207ENST00000544891 ACIN1Q9UKV3 1341 aaKnown RBP12.42□□□□□ -0.42
NECAP1-207ENST00000544891 CLIP1P30622 1438 aa12.41□□□□□ -0.42
NECAP1-207ENST00000544891 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
NECAP1-207ENST00000544891 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.42
NECAP1-207ENST00000544891 TOPBP1Q92547 1522 aa12.39□□□□□ -0.43
NECAP1-207ENST00000544891 ZNF326Q5BKZ1 582 aaKnown RBP12.38□□□□□ -0.43
NECAP1-207ENST00000544891 VPS8Q8N3P4 1428 aa12.37□□□□□ -0.43
NECAP1-207ENST00000544891 CUX2O14529 1486 aa12.37□□□□□ -0.43
NECAP1-207ENST00000544891 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
NECAP1-207ENST00000544891 CTTNBP2Q8WZ74 1663 aa12.33□□□□□ -0.44
NECAP1-207ENST00000544891 CANXP27824 592 aaKnown RBP12.32□□□□□ -0.44
NECAP1-207ENST00000544891 ABCA5Q8WWZ7 1642 aa12.31□□□□□ -0.44
NECAP1-207ENST00000544891 TONSLQ96HA7 1378 aa12.31□□□□□ -0.44
NECAP1-207ENST00000544891 NPM1P06748 294 aaKnown RBP eCLIP12.31□□□□□ -0.44
NECAP1-207ENST00000544891 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
NECAP1-207ENST00000544891 EFCAB5A4FU69 1503 aa12.31□□□□□ -0.44
NECAP1-207ENST00000544891 ESF1Q9H501 851 aaKnown RBP12.3□□□□□ -0.44
NECAP1-207ENST00000544891 MRC2Q9UBG0 1479 aa12.3□□□□□ -0.44
NECAP1-207ENST00000544891 URB2Q14146 1524 aaKnown RBP12.28□□□□□ -0.44
NECAP1-207ENST00000544891 P3H3Q8IVL6 736 aa12.28□□□□□ -0.44
NECAP1-207ENST00000544891 NESP48681 1621 aa12.28□□□□□ -0.44
NECAP1-207ENST00000544891 MAP3K1Q13233 1512 aa12.28□□□□□ -0.44
NECAP1-207ENST00000544891 IGF1RP08069 1367 aa12.27□□□□□ -0.44
NECAP1-207ENST00000544891 CARMIL1Q5VZK9 1371 aa12.27□□□□□ -0.44
NECAP1-207ENST00000544891 ARAP1Q96P48 1450 aa12.27□□□□□ -0.45
NECAP1-207ENST00000544891 ZNF777Q9ULD5 760 aaPredicted RBP12.26□□□□□ -0.45
NECAP1-207ENST00000544891 PBRM1Q86U86 1689 aa12.26□□□□□ -0.45
NECAP1-207ENST00000544891 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
NECAP1-207ENST00000544891 WDR62O43379 1518 aa12.24□□□□□ -0.45
NECAP1-207ENST00000544891 BCANQ96GW7 911 aa12.24□□□□□ -0.45
NECAP1-207ENST00000544891 TARBP1Q13395 1621 aaKnown RBP12.22□□□□□ -0.45
NECAP1-207ENST00000544891 ANP32AP39687 249 aaKnown RBP12.22□□□□□ -0.45
NECAP1-207ENST00000544891 TSPY4P0CV99 314 aa12.21□□□□□ -0.45
NECAP1-207ENST00000544891 TSPY10P0CW01 314 aa12.21□□□□□ -0.45
NECAP1-207ENST00000544891 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.45
NECAP1-207ENST00000544891 IFT140Q96RY7 1462 aa12.21□□□□□ -0.46
NECAP1-207ENST00000544891 CFAP43Q8NDM7 1665 aa12.2□□□□□ -0.46
NECAP1-207ENST00000544891 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
NECAP1-207ENST00000544891 AQRO60306 1485 aaKnown RBP eCLIP12.19□□□□□ -0.466e-7■■■■■ 30.6
NECAP1-207ENST00000544891 GAPVD1Q14C86 1478 aa12.19□□□□□ -0.46
NECAP1-207ENST00000544891 ARHGAP35Q9NRY4 1499 aa12.19□□□□□ -0.46
NECAP1-207ENST00000544891 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
NECAP1-207ENST00000544891 MTUS2Q5JR59 1369 aa12.17□□□□□ -0.46
NECAP1-207ENST00000544891 THOC2Q8NI27 1593 aaKnown RBP12.17□□□□□ -0.46
NECAP1-207ENST00000544891 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.16□□□□□ -0.46
NECAP1-207ENST00000544891 ADAMTS12P58397 1594 aa12.15□□□□□ -0.46
NECAP1-207ENST00000544891 FYCO1Q9BQS8 1478 aa12.15□□□□□ -0.46
NECAP1-207ENST00000544891 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
NECAP1-207ENST00000544891 SAMD9Q5K651 1589 aa12.14□□□□□ -0.47
NECAP1-207ENST00000544891 TIAM1Q13009 1591 aa12.13□□□□□ -0.47
NECAP1-207ENST00000544891 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
NECAP1-207ENST00000544891 GRIN2BQ13224 1484 aa12.11□□□□□ -0.47
NECAP1-207ENST00000544891 FMN1Q68DA7 1419 aa12.11□□□□□ -0.47
NECAP1-207ENST00000544891 CHMP7Q8WUX9 453 aaPredicted RBP12.1□□□□□ -0.47
NECAP1-207ENST00000544891 CHGAP10645 457 aaKnown RBP12.09□□□□□ -0.47
NECAP1-207ENST00000544891 ERCC6Q03468 1493 aa12.09□□□□□ -0.47
NECAP1-207ENST00000544891 CASKIN1Q8WXD9 1431 aa12.09□□□□□ -0.47
NECAP1-207ENST00000544891 ANP32BQ92688 251 aaKnown RBP12.08□□□□□ -0.48
NECAP1-207ENST00000544891 RRBP1Q9P2E9 1410 aaKnown RBP12.08□□□□□ -0.48
NECAP1-207ENST00000544891 PCF11O94913 1555 aaKnown RBP12.08□□□□□ -0.48
NECAP1-207ENST00000544891 TMC1Q8TDI8 760 aa12.08□□□□□ -0.48
NECAP1-207ENST00000544891 HNRNPUQ00839 825 aaKnown RBP eCLIP12.06□□□□□ -0.48
NECAP1-207ENST00000544891 CCDC18Q5T9S5 1454 aa12.06□□□□□ -0.48
NECAP1-207ENST00000544891 IQGAP2Q13576 1575 aa12.05□□□□□ -0.48
NECAP1-207ENST00000544891 HECW1Q76N89 1606 aa12.05□□□□□ -0.48
NECAP1-207ENST00000544891 PLEKHD1A6NEE1 506 aa12.04□□□□□ -0.48
NECAP1-207ENST00000544891 WDR43Q15061 677 aaKnown RBP eCLIP12.04□□□□□ -0.48
NECAP1-207ENST00000544891 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
NECAP1-207ENST00000544891 EIF4G2P78344 907 aaKnown RBP eCLIP12.03□□□□□ -0.48
NECAP1-207ENST00000544891 CDCA8Q53HL2 280 aa12.03□□□□□ -0.48
NECAP1-207ENST00000544891 EIF4G3O43432 1585 aaKnown RBP12.03□□□□□ -0.48
NECAP1-207ENST00000544891 DDX10Q13206 875 aaKnown RBP12.03□□□□□ -0.48
NECAP1-207ENST00000544891 LRRC9Q6ZRR7 1453 aa12.03□□□□□ -0.48
NECAP1-207ENST00000544891 HSP90AA1P07900 732 aaKnown RBP12.01□□□□□ -0.49
NECAP1-207ENST00000544891 UGGT2Q9NYU1 1516 aa12□□□□□ -0.49
NECAP1-207ENST00000544891 EHBP1L1Q8N3D4 1523 aa12□□□□□ -0.49
NECAP1-207ENST00000544891 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
NECAP1-207ENST00000544891 TDRD9Q8NDG6 1382 aaKnown RBP11.99□□□□□ -0.49
NECAP1-207ENST00000544891 FKBP8Q14318 412 aa11.99□□□□□ -0.49
NECAP1-207ENST00000544891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.99□□□□□ -0.49
NECAP1-207ENST00000544891 CHIC2Q9UKJ5 165 aa11.99□□□□□ -0.49
NECAP1-207ENST00000544891 MRS2Q9HD23 443 aa11.98□□□□□ -0.49
NECAP1-207ENST00000544891 FAM9BQ8IZU0 186 aa11.98□□□□□ -0.49
NECAP1-207ENST00000544891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.49
NECAP1-207ENST00000544891 SUPT6HQ7KZ85 1726 aaKnown RBP11.98□□□□□ -0.49
NECAP1-207ENST00000544891 SNAPC4Q5SXM2 1469 aa11.98□□□□□ -0.49
NECAP1-207ENST00000544891 CCDC136Q96JN2 1154 aa11.97□□□□□ -0.49
NECAP1-207ENST00000544891 CCNB3Q8WWL7 1395 aa11.95□□□□□ -0.5
NECAP1-207ENST00000544891 FHOD3Q2V2M9 1422 aa11.95□□□□□ -0.5
NECAP1-207ENST00000544891 KIAA0586Q9BVV6 1533 aa11.95□□□□□ -0.5
NECAP1-207ENST00000544891 SYNJ2O15056 1496 aa11.94□□□□□ -0.5
NECAP1-207ENST00000544891 MYH16Q9H6N6 1097 aa11.94□□□□□ -0.5
NECAP1-207ENST00000544891 KIAA0556O60303 1618 aa11.93□□□□□ -0.5
NECAP1-207ENST00000544891 GRIN2AQ12879 1464 aa11.93□□□□□ -0.5
NECAP1-207ENST00000544891 TIMELESSQ9UNS1 1208 aa11.93□□□□□ -0.5
NECAP1-207ENST00000544891 NCBP3Q53F19 620 aaKnown RBP11.92□□□□□ -0.5
NECAP1-207ENST00000544891 CFAP53Q96M91 514 aa11.92□□□□□ -0.5
NECAP1-207ENST00000544891 NPM2Q86SE8 214 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms