RNA–Protein interactions for RNA: ENST00000544496.5

PCMT1-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 2 BASIC

Gene PCMT1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-211ENST00000544496 ARHGAP35Q9NRY4 1499 aa36.71■■■■□ 3.47
PCMT1-211ENST00000544496 GRIN2AQ12879 1464 aa36.7■■■■□ 3.47
PCMT1-211ENST00000544496 CHMP7Q8WUX9 453 aaPredicted RBP36.68■■■■□ 3.46
PCMT1-211ENST00000544496 EFCAB5A4FU69 1503 aa36.67■■■■□ 3.46
PCMT1-211ENST00000544496 ARAP1Q96P48 1450 aa36.66■■■■□ 3.46
PCMT1-211ENST00000544496 IQGAP2Q13576 1575 aa36.56■■■■□ 3.44
PCMT1-211ENST00000544496 KIAA0586Q9BVV6 1533 aa36.55■■■■□ 3.44
PCMT1-211ENST00000544496 FBLN2P98095 1184 aa36.52■■■■□ 3.44
PCMT1-211ENST00000544496 APLP2Q06481 763 aa36.48■■■■□ 3.43
PCMT1-211ENST00000544496 SAMD9Q5K651 1589 aa36.46■■■■□ 3.43
PCMT1-211ENST00000544496 NUP160Q12769 1436 aa36.46■■■■□ 3.43
PCMT1-211ENST00000544496 UGGT2Q9NYU1 1516 aa36.41■■■■□ 3.42
PCMT1-211ENST00000544496 TRIM26Q12899 539 aaPredicted RBP36.41■■■■□ 3.42
PCMT1-211ENST00000544496 CEP170Q5SW79 1584 aa36.4■■■■□ 3.42
PCMT1-211ENST00000544496 FHOD3Q2V2M9 1422 aa36.36■■■■□ 3.41
PCMT1-211ENST00000544496 FMN1Q68DA7 1419 aa36.36■■■■□ 3.41
PCMT1-211ENST00000544496 P3H3Q8IVL6 736 aa36.36■■■■□ 3.41
PCMT1-211ENST00000544496 CHD1O14646 1710 aa36.26■■■■□ 3.4
PCMT1-211ENST00000544496 PPARGC1BQ86YN6 1023 aaKnown RBP36.24■■■■□ 3.39
PCMT1-211ENST00000544496 FYCO1Q9BQS8 1478 aa36.21■■■■□ 3.39
PCMT1-211ENST00000544496 CASKIN1Q8WXD9 1431 aa36.21■■■■□ 3.39
PCMT1-211ENST00000544496 PCGF6Q9BYE7 350 aa36.21■■■■□ 3.39
PCMT1-211ENST00000544496 MAP3K1Q13233 1512 aa36.2■■■■□ 3.39
PCMT1-211ENST00000544496 JPH4Q96JJ6 628 aa36.18■■■■□ 3.38
PCMT1-211ENST00000544496 KIAA0556O60303 1618 aa36.17■■■■□ 3.38
PCMT1-211ENST00000544496 DISP1Q96F81 1524 aa36.16■■■■□ 3.38
PCMT1-211ENST00000544496 CARMIL2Q6F5E8 1435 aa36.16■■■■□ 3.38
PCMT1-211ENST00000544496 PCF11O94913 1555 aaKnown RBP36.15■■■■□ 3.38
PCMT1-211ENST00000544496 TIAM1Q13009 1591 aa36.05■■■■□ 3.36
PCMT1-211ENST00000544496 ATP1B4Q9UN42 357 aaPredicted RBP36.03■■■■□ 3.36
PCMT1-211ENST00000544496 TTBK1Q5TCY1 1321 aaPredicted RBP36.01■■■■□ 3.35
PCMT1-211ENST00000544496 CFAP43Q8NDM7 1665 aa35.97■■■■□ 3.35
PCMT1-211ENST00000544496 KANK4Q5T7N3 995 aaPredicted RBP35.95■■■■□ 3.35
PCMT1-211ENST00000544496 SHROOM2Q13796 1616 aa35.95■■■■□ 3.34
PCMT1-211ENST00000544496 HECW1Q76N89 1606 aa35.94■■■■□ 3.34
PCMT1-211ENST00000544496 PRG4Q92954 1404 aaPredicted RBP35.94■■■■□ 3.34
PCMT1-211ENST00000544496 CLASP1Q7Z460 1538 aa35.92■■■■□ 3.34
PCMT1-211ENST00000544496 CCDC18Q5T9S5 1454 aa35.91■■■■□ 3.34
PCMT1-211ENST00000544496 LRRC9Q6ZRR7 1453 aa35.91■■■■□ 3.34
PCMT1-211ENST00000544496 RAPGEF6Q8TEU7 1601 aa35.81■■■■□ 3.32
PCMT1-211ENST00000544496 EPRSP07814 1512 aaKnown RBP35.77■■■■□ 3.32
PCMT1-211ENST00000544496 PTPRGP23470 1445 aa35.74■■■■□ 3.31
PCMT1-211ENST00000544496 LRRIQ1Q96JM4 1722 aa35.74■■■■□ 3.31
PCMT1-211ENST00000544496 OSCARQ8IYS5 282 aa35.73■■■■□ 3.31
PCMT1-211ENST00000544496 MTUS2Q5JR59 1369 aa35.73■■■■□ 3.31
PCMT1-211ENST00000544496 NUP153P49790 1475 aaKnown RBP35.7■■■■□ 3.3
PCMT1-211ENST00000544496 PLB1Q6P1J6 1458 aa35.67■■■■□ 3.3
PCMT1-211ENST00000544496 EHBP1L1Q8N3D4 1523 aa35.67■■■■□ 3.3
PCMT1-211ENST00000544496 ABCA8O94911 1581 aa35.66■■■■□ 3.3
PCMT1-211ENST00000544496 CDK11AQ9UQ88 783 aaPredicted RBP35.63■■■■□ 3.29
PCMT1-211ENST00000544496 RRBP1Q9P2E9 1410 aaKnown RBP35.62■■■■□ 3.29
PCMT1-211ENST00000544496 CDK13Q14004 1512 aaKnown RBP35.59■■■■□ 3.29
PCMT1-211ENST00000544496 ERCC6L2Q5T890 1561 aa35.55■■■■□ 3.28
PCMT1-211ENST00000544496 SUPT6HQ7KZ85 1726 aaKnown RBP35.54■■■■□ 3.28
PCMT1-211ENST00000544496 UACAQ9BZF9 1416 aa35.54■■■■□ 3.28
PCMT1-211ENST00000544496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.52■■■■□ 3.28
PCMT1-211ENST00000544496 HNRNPUL2Q1KMD3 747 aaKnown RBP35.52■■■■□ 3.28
PCMT1-211ENST00000544496 CCNB3Q8WWL7 1395 aa35.52■■■■□ 3.28
PCMT1-211ENST00000544496 PHLDB1Q86UU1 1377 aa35.51■■■■□ 3.28
PCMT1-211ENST00000544496 MAGI3Q5TCQ9 1506 aa35.49■■■■□ 3.27
PCMT1-211ENST00000544496 ARID3CA6NKF2 412 aa35.48■■■■□ 3.27
PCMT1-211ENST00000544496 NCOA2Q15596 1464 aa35.48■■■■□ 3.27
PCMT1-211ENST00000544496 ARHGEF11O15085 1522 aa35.42■■■■□ 3.26
PCMT1-211ENST00000544496 ATP10BO94823 1461 aa35.42■■■■□ 3.26
PCMT1-211ENST00000544496 ABCC2Q92887 1545 aa35.41■■■■□ 3.26
PCMT1-211ENST00000544496 TROQ12816 1431 aaPredicted RBP35.4■■■■□ 3.26
PCMT1-211ENST00000544496 UHRF1BP1LA0JNW5 1464 aa35.38■■■■□ 3.25
PCMT1-211ENST00000544496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.38■■■■□ 3.25
PCMT1-211ENST00000544496 PLEKHD1A6NEE1 506 aa35.37■■■■□ 3.25
PCMT1-211ENST00000544496 MYOM3Q5VTT5 1437 aa35.37■■■■□ 3.25
PCMT1-211ENST00000544496 FGD6Q6ZV73 1430 aa35.33■■■■□ 3.25
PCMT1-211ENST00000544496 ADCY10Q96PN6 1610 aa35.26■■■■□ 3.24
PCMT1-211ENST00000544496 MIA2Q96PC5 1412 aa35.25■■■■□ 3.23
PCMT1-211ENST00000544496 FAM50AQ14320 339 aaKnown RBP35.24■■■■□ 3.23
PCMT1-211ENST00000544496 KDM5BQ9UGL1 1544 aa35.2■■■■□ 3.23
PCMT1-211ENST00000544496 KIF14Q15058 1648 aa35.18■■■■□ 3.22
PCMT1-211ENST00000544496 PTPN23Q9H3S7 1636 aa35.13■■■■□ 3.21
PCMT1-211ENST00000544496 TCOF1Q13428 1488 aaKnown RBP35.13■■■■□ 3.21
PCMT1-211ENST00000544496 ZCCHC11Q5TAX3 1644 aaKnown RBP35.1■■■■□ 3.21
PCMT1-211ENST00000544496 ITSN2Q9NZM3 1697 aa35.09■■■■□ 3.21
PCMT1-211ENST00000544496 HRCP23327 699 aa35.09■■■■□ 3.21
PCMT1-211ENST00000544496 ITGAEP38570 1179 aa35.08■■■■□ 3.21
PCMT1-211ENST00000544496 ABCC10Q5T3U5 1492 aa35.05■■■■□ 3.2
PCMT1-211ENST00000544496 GPATCH8Q9UKJ3 1502 aaKnown RBP35.04■■■■□ 3.2
PCMT1-211ENST00000544496 CFDP1Q9UEE9 299 aaPredicted RBP35.01■■■■□ 3.19
PCMT1-211ENST00000544496 ZEB1P37275 1124 aaPredicted RBP34.98■■■■□ 3.19
PCMT1-211ENST00000544496 NPM1P06748 294 aaKnown RBP eCLIP34.96■■■■□ 3.19
PCMT1-211ENST00000544496 CCER1Q8TC90 406 aaPredicted RBP34.95■■■■□ 3.19
PCMT1-211ENST00000544496 CDC42BPAQ5VT25 1732 aa34.9■■■■□ 3.18
PCMT1-211ENST00000544496 WDR7Q9Y4E6 1490 aa34.88■■■■□ 3.17
PCMT1-211ENST00000544496 SETD5Q9C0A6 1442 aa34.88■■■■□ 3.17
PCMT1-211ENST00000544496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.87■■■■□ 3.176e-9■□□□□ 10.1
PCMT1-211ENST00000544496 CAMSAP2Q08AD1 1489 aa34.85■■■■□ 3.17
PCMT1-211ENST00000544496 KCNH8Q96L42 1107 aa34.84■■■■□ 3.17
PCMT1-211ENST00000544496 RIMBP3CA6NJZ7 1639 aa34.83■■■■□ 3.17
PCMT1-211ENST00000544496 RIMBP3BA6NNM3 1639 aa34.83■■■■□ 3.17
PCMT1-211ENST00000544496 RIMBP3Q9UFD9 1639 aa34.83■■■■□ 3.17
PCMT1-211ENST00000544496 PREX2Q70Z35 1606 aa34.83■■■■□ 3.17
PCMT1-211ENST00000544496 PTPRKQ15262 1439 aa34.81■■■■□ 3.16
PCMT1-211ENST00000544496 DNMT1P26358 1616 aaKnown RBP34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms