RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 KANK4Q5T7N3 995 aaPredicted RBP25.61■■□□□ 1.69
CCT4-204ENST00000544079 WDR97A6NE52 1622 aa25.6■■□□□ 1.69
CCT4-204ENST00000544079 PRXQ9BXM0 1461 aa25.57■■□□□ 1.68
CCT4-204ENST00000544079 RAB3GAP2Q9H2M9 1393 aa25.57■■□□□ 1.68
CCT4-204ENST00000544079 ANP32CO43423 234 aa25.56■■□□□ 1.68
CCT4-204ENST00000544079 TOP2BQ02880 1626 aa25.54■■□□□ 1.68
CCT4-204ENST00000544079 TRIM52Q96A61 297 aa25.5■■□□□ 1.67
CCT4-204ENST00000544079 SETD5Q9C0A6 1442 aa25.49■■□□□ 1.67
CCT4-204ENST00000544079 DEKP35659 375 aaKnown RBP25.48■■□□□ 1.67
CCT4-204ENST00000544079 MAP3K1Q13233 1512 aa25.47■■□□□ 1.67
CCT4-204ENST00000544079 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
CCT4-204ENST00000544079 RANGAP1P46060 587 aaPredicted RBP25.38■■□□□ 1.65
CCT4-204ENST00000544079 PPP4R2Q9NY27 417 aa25.35■■□□□ 1.65
CCT4-204ENST00000544079 ARHGAP35Q9NRY4 1499 aa25.31■■□□□ 1.64
CCT4-204ENST00000544079 TIAM1Q13009 1591 aa25.3■■□□□ 1.64
CCT4-204ENST00000544079 SIN3AQ96ST3 1273 aa25.26■■□□□ 1.63
CCT4-204ENST00000544079 NOP58Q9Y2X3 529 aaKnown RBP25.24■■□□□ 1.63
CCT4-204ENST00000544079 HNRNPUQ00839 825 aaKnown RBP eCLIP25.21■■□□□ 1.63
CCT4-204ENST00000544079 LRRC9Q6ZRR7 1453 aa25.17■■□□□ 1.62
CCT4-204ENST00000544079 KIF27Q86VH2 1401 aa25.15■■□□□ 1.62
CCT4-204ENST00000544079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.14■■□□□ 1.62
CCT4-204ENST00000544079 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
CCT4-204ENST00000544079 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
CCT4-204ENST00000544079 IRX6P78412 446 aaPredicted RBP25.11■■□□□ 1.61
CCT4-204ENST00000544079 CFAP43Q8NDM7 1665 aa25.1■■□□□ 1.61
CCT4-204ENST00000544079 PHLDB1Q86UU1 1377 aa25.09■■□□□ 1.61
CCT4-204ENST00000544079 TONSLQ96HA7 1378 aa25.07■■□□□ 1.6
CCT4-204ENST00000544079 HIRIP3Q9BW71 556 aaPredicted RBP25.07■■□□□ 1.6
CCT4-204ENST00000544079 ANO8Q9HCE9 1232 aaPredicted RBP25.05■■□□□ 1.6
CCT4-204ENST00000544079 NCOA2Q15596 1464 aa24.99■■□□□ 1.59
CCT4-204ENST00000544079 PAK3O75914 559 aaPredicted RBP24.99■■□□□ 1.59
CCT4-204ENST00000544079 RTL5Q5HYW3 569 aaPredicted RBP24.99■■□□□ 1.59
CCT4-204ENST00000544079 ZBED9Q6R2W3 1325 aa24.98■■□□□ 1.59
CCT4-204ENST00000544079 NBR1Q14596 966 aa24.98■■□□□ 1.59
CCT4-204ENST00000544079 IPO9Q96P70 1041 aaKnown RBP24.97■■□□□ 1.59
CCT4-204ENST00000544079 CUX1P39880 1505 aa24.96■■□□□ 1.59
CCT4-204ENST00000544079 B4GALNT3Q6L9W6 998 aa24.95■■□□□ 1.58
CCT4-204ENST00000544079 ANP32AP39687 249 aaKnown RBP24.95■■□□□ 1.58
CCT4-204ENST00000544079 FAM50AQ14320 339 aaKnown RBP24.94■■□□□ 1.58
CCT4-204ENST00000544079 KDM5BQ9UGL1 1544 aa24.93■■□□□ 1.58
CCT4-204ENST00000544079 UACAQ9BZF9 1416 aa24.93■■□□□ 1.58
CCT4-204ENST00000544079 NCAPD3P42695 1498 aa24.93■■□□□ 1.58
CCT4-204ENST00000544079 CNTLNQ9NXG0 1405 aa24.91■■□□□ 1.58
CCT4-204ENST00000544079 SALL2Q9Y467 1007 aaPredicted RBP24.88■■□□□ 1.57
CCT4-204ENST00000544079 WASHC2AQ641Q2 1341 aa24.88■■□□□ 1.57
CCT4-204ENST00000544079 CCDC18Q5T9S5 1454 aa24.88■■□□□ 1.57
CCT4-204ENST00000544079 ZBTB47Q9UFB7 747 aaPredicted RBP24.87■■□□□ 1.57
CCT4-204ENST00000544079 HFM1A2PYH4 1435 aa24.85■■□□□ 1.57
CCT4-204ENST00000544079 USP35Q9P2H5 1018 aa24.83■■□□□ 1.57
CCT4-204ENST00000544079 PCF11O94913 1555 aaKnown RBP24.83■■□□□ 1.56
CCT4-204ENST00000544079 SMG6Q86US8 1419 aaKnown RBP24.82■■□□□ 1.56
CCT4-204ENST00000544079 PTPN23Q9H3S7 1636 aa24.81■■□□□ 1.56
CCT4-204ENST00000544079 RNF123Q5XPI4 1314 aa24.8■■□□□ 1.56
CCT4-204ENST00000544079 C11orf95C9JLR9 678 aaPredicted RBP24.78■■□□□ 1.56
CCT4-204ENST00000544079 FYCO1Q9BQS8 1478 aa24.78■■□□□ 1.56
CCT4-204ENST00000544079 PRKRIP1Q9H875 184 aaPredicted RBP24.77■■□□□ 1.56
CCT4-204ENST00000544079 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.562e-9■■■□□ 16.1
CCT4-204ENST00000544079 DNAJC5Q9H3Z4 198 aa24.75■■□□□ 1.55
CCT4-204ENST00000544079 HSPA5P11021 654 aaKnown RBP24.75■■□□□ 1.55
CCT4-204ENST00000544079 FGD6Q6ZV73 1430 aa24.74■■□□□ 1.55
CCT4-204ENST00000544079 IGF1RP08069 1367 aa24.73■■□□□ 1.55
CCT4-204ENST00000544079 UBE2Q2Q8WVN8 375 aa24.73■■□□□ 1.55
CCT4-204ENST00000544079 NCOA1Q15788 1441 aa24.72■■□□□ 1.55
CCT4-204ENST00000544079 IL27Q8NEV9 243 aa24.72■■□□□ 1.55
CCT4-204ENST00000544079 CCDC184Q52MB2 194 aa24.72■■□□□ 1.55
CCT4-204ENST00000544079 WASHC2CQ9Y4E1 1318 aa24.71■■□□□ 1.55
CCT4-204ENST00000544079 EIF4G2P78344 907 aaKnown RBP eCLIP24.71■■□□□ 1.55
CCT4-204ENST00000544079 ABCA5Q8WWZ7 1642 aa24.71■■□□□ 1.55
CCT4-204ENST00000544079 MRS2Q9HD23 443 aa24.69■■□□□ 1.54
CCT4-204ENST00000544079 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
CCT4-204ENST00000544079 CCDC136Q96JN2 1154 aa24.68■■□□□ 1.54
CCT4-204ENST00000544079 POLR1AO95602 1720 aaPredicted RBP24.68■■□□□ 1.54
CCT4-204ENST00000544079 CCDC7Q96M83 1385 aa24.67■■□□□ 1.54
CCT4-204ENST00000544079 EFCAB5A4FU69 1503 aa24.67■■□□□ 1.54
CCT4-204ENST00000544079 NAIPQ13075 1403 aa24.66■■□□□ 1.54
CCT4-204ENST00000544079 FAM9BQ8IZU0 186 aa24.66■■□□□ 1.54
CCT4-204ENST00000544079 FGD5Q6ZNL6 1462 aa24.65■■□□□ 1.54
CCT4-204ENST00000544079 FMN1Q68DA7 1419 aa24.65■■□□□ 1.54
CCT4-204ENST00000544079 ERCC6Q03468 1493 aa24.65■■□□□ 1.54
CCT4-204ENST00000544079 CARMIL1Q5VZK9 1371 aa24.64■■□□□ 1.54
CCT4-204ENST00000544079 NUDCQ9Y266 331 aa24.64■■□□□ 1.54
CCT4-204ENST00000544079 HECW1Q76N89 1606 aa24.62■■□□□ 1.53
CCT4-204ENST00000544079 HMGXB3Q12766 1538 aa24.62■■□□□ 1.53
CCT4-204ENST00000544079 PPM1GO15355 546 aaPredicted RBP24.6■■□□□ 1.53
CCT4-204ENST00000544079 PTPRKQ15262 1439 aa24.6■■□□□ 1.53
CCT4-204ENST00000544079 AKNAQ7Z591 1439 aa24.6■■□□□ 1.53
CCT4-204ENST00000544079 CFTRP13569 1480 aa24.6■■□□□ 1.53
CCT4-204ENST00000544079 PRDM2Q13029 1718 aa24.57■■□□□ 1.52
CCT4-204ENST00000544079 TCERG1O14776 1098 aaKnown RBP24.55■■□□□ 1.52
CCT4-204ENST00000544079 GCC2Q8IWJ2 1684 aa24.53■■□□□ 1.52
CCT4-204ENST00000544079 NEFMP07197 916 aa24.53■■□□□ 1.52
CCT4-204ENST00000544079 MS4A1P11836 297 aa24.49■■□□□ 1.51
CCT4-204ENST00000544079 RTN4Q9NQC3 1192 aaKnown RBP24.49■■□□□ 1.51
CCT4-204ENST00000544079 MYOM3Q5VTT5 1437 aa24.48■■□□□ 1.51
CCT4-204ENST00000544079 DENND4BO75064 1496 aaPredicted RBP24.47■■□□□ 1.51
CCT4-204ENST00000544079 FHOD3Q2V2M9 1422 aa24.47■■□□□ 1.51
CCT4-204ENST00000544079 SPATA31E1Q6ZUB1 1445 aa24.45■■□□□ 1.5
CCT4-204ENST00000544079 NESP48681 1621 aa24.45■■□□□ 1.5
CCT4-204ENST00000544079 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
CCT4-204ENST00000544079 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms