RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 CLIP1P30622 1438 aa25.53■■□□□ 1.68
XRCC1-202ENST00000543982 CEP170Q5SW79 1584 aa25.51■■□□□ 1.67
XRCC1-202ENST00000543982 NUP160Q12769 1436 aa25.49■■□□□ 1.67
XRCC1-202ENST00000543982 CHD1O14646 1710 aa25.46■■□□□ 1.67
XRCC1-202ENST00000543982 KIAA0586Q9BVV6 1533 aa25.44■■□□□ 1.66
XRCC1-202ENST00000543982 P3H3Q8IVL6 736 aa25.44■■□□□ 1.66
XRCC1-202ENST00000543982 ARHGAP35Q9NRY4 1499 aa25.44■■□□□ 1.66
XRCC1-202ENST00000543982 CTTNBP2Q8WZ74 1663 aa25.44■■□□□ 1.66
XRCC1-202ENST00000543982 ARAP1Q96P48 1450 aa25.39■■□□□ 1.65
XRCC1-202ENST00000543982 IQGAP2Q13576 1575 aa25.38■■□□□ 1.65
XRCC1-202ENST00000543982 JPH4Q96JJ6 628 aa25.35■■□□□ 1.65
XRCC1-202ENST00000543982 FHOD3Q2V2M9 1422 aa25.31■■□□□ 1.64
XRCC1-202ENST00000543982 UGGT2Q9NYU1 1516 aa25.29■■□□□ 1.64
XRCC1-202ENST00000543982 DISP1Q96F81 1524 aa25.27■■□□□ 1.64
XRCC1-202ENST00000543982 SAMD9Q5K651 1589 aa25.25■■□□□ 1.63
XRCC1-202ENST00000543982 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
XRCC1-202ENST00000543982 EFCAB5A4FU69 1503 aa25.23■■□□□ 1.63
XRCC1-202ENST00000543982 CLASP1Q7Z460 1538 aa25.23■■□□□ 1.63
XRCC1-202ENST00000543982 VPS8Q8N3P4 1428 aa25.22■■□□□ 1.63
XRCC1-202ENST00000543982 PRG4Q92954 1404 aaPredicted RBP25.18■■□□□ 1.62
XRCC1-202ENST00000543982 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
XRCC1-202ENST00000543982 PPARGC1BQ86YN6 1023 aaKnown RBP25.15■■□□□ 1.62
XRCC1-202ENST00000543982 KIAA0556O60303 1618 aa25.14■■□□□ 1.62
XRCC1-202ENST00000543982 ERCC6L2Q5T890 1561 aa25.14■■□□□ 1.61
XRCC1-202ENST00000543982 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
XRCC1-202ENST00000543982 CARMIL2Q6F5E8 1435 aa25.08■■□□□ 1.61
XRCC1-202ENST00000543982 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
XRCC1-202ENST00000543982 ATP1B4Q9UN42 357 aaPredicted RBP25.04■■□□□ 1.6
XRCC1-202ENST00000543982 PCF11O94913 1555 aaKnown RBP25.02■■□□□ 1.6
XRCC1-202ENST00000543982 CASKIN1Q8WXD9 1431 aa25■■□□□ 1.59
XRCC1-202ENST00000543982 PTPRGP23470 1445 aa24.97■■□□□ 1.59
XRCC1-202ENST00000543982 PLB1Q6P1J6 1458 aa24.97■■□□□ 1.59
XRCC1-202ENST00000543982 KANK4Q5T7N3 995 aaPredicted RBP24.96■■□□□ 1.59
XRCC1-202ENST00000543982 ARID3CA6NKF2 412 aa24.96■■□□□ 1.59
XRCC1-202ENST00000543982 FYCO1Q9BQS8 1478 aa24.93■■□□□ 1.58
XRCC1-202ENST00000543982 APLP2Q06481 763 aa24.9■■□□□ 1.58
XRCC1-202ENST00000543982 NUP153P49790 1475 aaKnown RBP24.86■■□□□ 1.57
XRCC1-202ENST00000543982 ABCA8O94911 1581 aa24.84■■□□□ 1.57
XRCC1-202ENST00000543982 LRRIQ1Q96JM4 1722 aa24.84■■□□□ 1.57
XRCC1-202ENST00000543982 RAPGEF6Q8TEU7 1601 aa24.83■■□□□ 1.57
XRCC1-202ENST00000543982 TIAM1Q13009 1591 aa24.81■■□□□ 1.56
XRCC1-202ENST00000543982 CDK13Q14004 1512 aaKnown RBP24.81■■□□□ 1.56
XRCC1-202ENST00000543982 EPRSP07814 1512 aaKnown RBP24.81■■□□□ 1.56
XRCC1-202ENST00000543982 UACAQ9BZF9 1416 aa24.8■■□□□ 1.56
XRCC1-202ENST00000543982 MAP3K1Q13233 1512 aa24.78■■□□□ 1.56
XRCC1-202ENST00000543982 ARHGEF11O15085 1522 aa24.78■■□□□ 1.56
XRCC1-202ENST00000543982 HECW1Q76N89 1606 aa24.78■■□□□ 1.56
XRCC1-202ENST00000543982 LRRC9Q6ZRR7 1453 aa24.75■■□□□ 1.55
XRCC1-202ENST00000543982 ATP10BO94823 1461 aa24.74■■□□□ 1.55
XRCC1-202ENST00000543982 MAGI3Q5TCQ9 1506 aa24.74■■□□□ 1.55
XRCC1-202ENST00000543982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.72■■□□□ 1.55
XRCC1-202ENST00000543982 HNRNPUL2Q1KMD3 747 aaKnown RBP24.72■■□□□ 1.55
XRCC1-202ENST00000543982 CFAP43Q8NDM7 1665 aa24.72■■□□□ 1.55
XRCC1-202ENST00000543982 CCDC18Q5T9S5 1454 aa24.7■■□□□ 1.55
XRCC1-202ENST00000543982 ABCC2Q92887 1545 aa24.69■■□□□ 1.54
XRCC1-202ENST00000543982 RIMBP3CA6NJZ7 1639 aa24.67■■□□□ 1.54
XRCC1-202ENST00000543982 RIMBP3BA6NNM3 1639 aa24.67■■□□□ 1.54
XRCC1-202ENST00000543982 RIMBP3Q9UFD9 1639 aa24.67■■□□□ 1.54
XRCC1-202ENST00000543982 MTUS2Q5JR59 1369 aa24.66■■□□□ 1.54
XRCC1-202ENST00000543982 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
XRCC1-202ENST00000543982 UHRF1BP1LA0JNW5 1464 aa24.65■■□□□ 1.54
XRCC1-202ENST00000543982 ADCY10Q96PN6 1610 aa24.64■■□□□ 1.53
XRCC1-202ENST00000543982 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
XRCC1-202ENST00000543982 PHLDB1Q86UU1 1377 aa24.59■■□□□ 1.53
XRCC1-202ENST00000543982 PCGF6Q9BYE7 350 aa24.59■■□□□ 1.53
XRCC1-202ENST00000543982 KDM5BQ9UGL1 1544 aa24.59■■□□□ 1.53
XRCC1-202ENST00000543982 PLEKHD1A6NEE1 506 aa24.56■■□□□ 1.52
XRCC1-202ENST00000543982 CDK11AQ9UQ88 783 aaPredicted RBP24.55■■□□□ 1.52
XRCC1-202ENST00000543982 TROQ12816 1431 aaPredicted RBP24.54■■□□□ 1.52
XRCC1-202ENST00000543982 EHBP1L1Q8N3D4 1523 aa24.54■■□□□ 1.52
XRCC1-202ENST00000543982 NCOA2Q15596 1464 aa24.53■■□□□ 1.52
XRCC1-202ENST00000543982 ZCCHC11Q5TAX3 1644 aaKnown RBP24.52■■□□□ 1.52
XRCC1-202ENST00000543982 KCNH8Q96L42 1107 aa24.46■■□□□ 1.51
XRCC1-202ENST00000543982 KIF14Q15058 1648 aa24.46■■□□□ 1.51
XRCC1-202ENST00000543982 SUPT6HQ7KZ85 1726 aaKnown RBP24.43■■□□□ 1.5
XRCC1-202ENST00000543982 RRBP1Q9P2E9 1410 aaKnown RBP24.42■■□□□ 1.5
XRCC1-202ENST00000543982 NPM1P06748 294 aaKnown RBP eCLIP24.41■■□□□ 1.5
XRCC1-202ENST00000543982 ASXL2Q76L83 1435 aa24.4■■□□□ 1.5
XRCC1-202ENST00000543982 ABCC10Q5T3U5 1492 aa24.39■■□□□ 1.5
XRCC1-202ENST00000543982 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
XRCC1-202ENST00000543982 MYOM3Q5VTT5 1437 aa24.38■■□□□ 1.49
XRCC1-202ENST00000543982 CCNB3Q8WWL7 1395 aa24.38■■□□□ 1.49
XRCC1-202ENST00000543982 FGD6Q6ZV73 1430 aa24.36■■□□□ 1.49
XRCC1-202ENST00000543982 WDR7Q9Y4E6 1490 aa24.35■■□□□ 1.49
XRCC1-202ENST00000543982 GPATCH8Q9UKJ3 1502 aaKnown RBP24.34■■□□□ 1.49
XRCC1-202ENST00000543982 ZNF644Q9H582 1327 aaPredicted RBP24.33■■□□□ 1.48
XRCC1-202ENST00000543982 FAM50AQ14320 339 aaKnown RBP24.33■■□□□ 1.48
XRCC1-202ENST00000543982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.32■■□□□ 1.48
XRCC1-202ENST00000543982 TTC37Q6PGP7 1564 aa24.28■■□□□ 1.48
XRCC1-202ENST00000543982 ITGAEP38570 1179 aa24.27■■□□□ 1.48
XRCC1-202ENST00000543982 CFDP1Q9UEE9 299 aaPredicted RBP24.27■■□□□ 1.48
XRCC1-202ENST00000543982 MIA2Q96PC5 1412 aa24.24■■□□□ 1.47
XRCC1-202ENST00000543982 ZNF777Q9ULD5 760 aaPredicted RBP24.23■■□□□ 1.47
XRCC1-202ENST00000543982 MAPKBP1O60336 1514 aa24.21■■□□□ 1.47
XRCC1-202ENST00000543982 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
XRCC1-202ENST00000543982 TCOF1Q13428 1488 aaKnown RBP24.21■■□□□ 1.47
XRCC1-202ENST00000543982 CDC42BPAQ5VT25 1732 aa24.2■■□□□ 1.46
XRCC1-202ENST00000543982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.46
XRCC1-202ENST00000543982 PTPRKQ15262 1439 aa24.18■■□□□ 1.46
XRCC1-202ENST00000543982 PLCH2O75038 1416 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms