RNA–Protein interactions for RNA: ENST00000543949.2

COMMD5-207, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COMMD5, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-207ENST00000543949 CLIP1P30622 1438 aa33.83■■■■□ 3.01
COMMD5-207ENST00000543949 CHD1O14646 1710 aa33.83■■■■□ 3.01
COMMD5-207ENST00000543949 RANGAP1P46060 587 aaPredicted RBP33.76■■■□□ 2.99
COMMD5-207ENST00000543949 CEP170Q5SW79 1584 aa33.75■■■□□ 2.99
COMMD5-207ENST00000543949 IQGAP2Q13576 1575 aa33.74■■■□□ 2.99
COMMD5-207ENST00000543949 NUP160Q12769 1436 aa33.73■■■□□ 2.99
COMMD5-207ENST00000543949 KIAA0586Q9BVV6 1533 aa33.72■■■□□ 2.99
COMMD5-207ENST00000543949 EFCAB5A4FU69 1503 aa33.65■■■□□ 2.98
COMMD5-207ENST00000543949 ARHGAP35Q9NRY4 1499 aa33.64■■■□□ 2.98
COMMD5-207ENST00000543949 SAMD9Q5K651 1589 aa33.57■■■□□ 2.96
COMMD5-207ENST00000543949 UGGT2Q9NYU1 1516 aa33.56■■■□□ 2.96
COMMD5-207ENST00000543949 ARAP1Q96P48 1450 aa33.55■■■□□ 2.96
COMMD5-207ENST00000543949 VPS8Q8N3P4 1428 aa33.48■■■□□ 2.95
COMMD5-207ENST00000543949 P3H3Q8IVL6 736 aa33.42■■■□□ 2.94
COMMD5-207ENST00000543949 CLASP1Q7Z460 1538 aa33.41■■■□□ 2.94
COMMD5-207ENST00000543949 FHOD3Q2V2M9 1422 aa33.41■■■□□ 2.94
COMMD5-207ENST00000543949 JPH4Q96JJ6 628 aa33.41■■■□□ 2.94
COMMD5-207ENST00000543949 KIAA0556O60303 1618 aa33.4■■■□□ 2.94
COMMD5-207ENST00000543949 DISP1Q96F81 1524 aa33.37■■■□□ 2.93
COMMD5-207ENST00000543949 SHROOM2Q13796 1616 aa33.37■■■□□ 2.93
COMMD5-207ENST00000543949 CARMIL2Q6F5E8 1435 aa33.35■■■□□ 2.93
COMMD5-207ENST00000543949 FMN1Q68DA7 1419 aa33.31■■■□□ 2.92
COMMD5-207ENST00000543949 OSCARQ8IYS5 282 aa33.28■■■□□ 2.92
COMMD5-207ENST00000543949 PRG4Q92954 1404 aaPredicted RBP33.26■■■□□ 2.91
COMMD5-207ENST00000543949 PCF11O94913 1555 aaKnown RBP33.22■■■□□ 2.91
COMMD5-207ENST00000543949 FYCO1Q9BQS8 1478 aa33.17■■■□□ 2.9
COMMD5-207ENST00000543949 CASKIN1Q8WXD9 1431 aa33.16■■■□□ 2.9
COMMD5-207ENST00000543949 APLP2Q06481 763 aa33.16■■■□□ 2.9
COMMD5-207ENST00000543949 ERCC6L2Q5T890 1561 aa33.07■■■□□ 2.89
COMMD5-207ENST00000543949 HECW1Q76N89 1606 aa33.05■■■□□ 2.88
COMMD5-207ENST00000543949 TTBK1Q5TCY1 1321 aaPredicted RBP33.05■■■□□ 2.88
COMMD5-207ENST00000543949 ATP1B4Q9UN42 357 aaPredicted RBP33.04■■■□□ 2.88
COMMD5-207ENST00000543949 RAPGEF6Q8TEU7 1601 aa33.03■■■□□ 2.88
COMMD5-207ENST00000543949 MAP3K1Q13233 1512 aa33.02■■■□□ 2.88
COMMD5-207ENST00000543949 PTPRGP23470 1445 aa33.01■■■□□ 2.87
COMMD5-207ENST00000543949 CFAP43Q8NDM7 1665 aa33■■■□□ 2.87
COMMD5-207ENST00000543949 TIAM1Q13009 1591 aa33■■■□□ 2.87
COMMD5-207ENST00000543949 LRRIQ1Q96JM4 1722 aa32.96■■■□□ 2.87
COMMD5-207ENST00000543949 CCDC18Q5T9S5 1454 aa32.94■■■□□ 2.86
COMMD5-207ENST00000543949 PLB1Q6P1J6 1458 aa32.94■■■□□ 2.86
COMMD5-207ENST00000543949 ABCA8O94911 1581 aa32.94■■■□□ 2.86
COMMD5-207ENST00000543949 PPARGC1BQ86YN6 1023 aaKnown RBP32.93■■■□□ 2.86
COMMD5-207ENST00000543949 NUP153P49790 1475 aaKnown RBP32.87■■■□□ 2.85
COMMD5-207ENST00000543949 EPRSP07814 1512 aaKnown RBP32.87■■■□□ 2.85
COMMD5-207ENST00000543949 UACAQ9BZF9 1416 aa32.83■■■□□ 2.85
COMMD5-207ENST00000543949 LRRC9Q6ZRR7 1453 aa32.81■■■□□ 2.84
COMMD5-207ENST00000543949 KANK4Q5T7N3 995 aaPredicted RBP32.79■■■□□ 2.84
COMMD5-207ENST00000543949 CDK13Q14004 1512 aaKnown RBP32.79■■■□□ 2.84
COMMD5-207ENST00000543949 ABCC2Q92887 1545 aa32.77■■■□□ 2.84
COMMD5-207ENST00000543949 ARHGEF11O15085 1522 aa32.76■■■□□ 2.83
COMMD5-207ENST00000543949 UHRF1BP1LA0JNW5 1464 aa32.71■■■□□ 2.83
COMMD5-207ENST00000543949 MTUS2Q5JR59 1369 aa32.71■■■□□ 2.83
COMMD5-207ENST00000543949 ARID3CA6NKF2 412 aa32.71■■■□□ 2.83
COMMD5-207ENST00000543949 EHBP1L1Q8N3D4 1523 aa32.7■■■□□ 2.83
COMMD5-207ENST00000543949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.68■■■□□ 2.82
COMMD5-207ENST00000543949 HNRNPUL2Q1KMD3 747 aaKnown RBP32.68■■■□□ 2.82
COMMD5-207ENST00000543949 TRIM26Q12899 539 aaPredicted RBP32.66■■■□□ 2.82
COMMD5-207ENST00000543949 ATP10BO94823 1461 aa32.66■■■□□ 2.82
COMMD5-207ENST00000543949 CDK11AQ9UQ88 783 aaPredicted RBP32.66■■■□□ 2.82
COMMD5-207ENST00000543949 RIMBP3CA6NJZ7 1639 aa32.65■■■□□ 2.82
COMMD5-207ENST00000543949 RIMBP3BA6NNM3 1639 aa32.65■■■□□ 2.82
COMMD5-207ENST00000543949 RIMBP3Q9UFD9 1639 aa32.65■■■□□ 2.82
COMMD5-207ENST00000543949 MAGI3Q5TCQ9 1506 aa32.64■■■□□ 2.82
COMMD5-207ENST00000543949 SUPT6HQ7KZ85 1726 aaKnown RBP32.61■■■□□ 2.81
COMMD5-207ENST00000543949 ADCY10Q96PN6 1610 aa32.61■■■□□ 2.81
COMMD5-207ENST00000543949 KDM5BQ9UGL1 1544 aa32.56■■■□□ 2.8
COMMD5-207ENST00000543949 ZCCHC11Q5TAX3 1644 aaKnown RBP32.56■■■□□ 2.8
COMMD5-207ENST00000543949 TROQ12816 1431 aaPredicted RBP32.54■■■□□ 2.8
COMMD5-207ENST00000543949 PLEKHD1A6NEE1 506 aa32.51■■■□□ 2.79
COMMD5-207ENST00000543949 NCOA2Q15596 1464 aa32.5■■■□□ 2.79
COMMD5-207ENST00000543949 PCGF6Q9BYE7 350 aa32.45■■■□□ 2.78
COMMD5-207ENST00000543949 PHLDB1Q86UU1 1377 aa32.44■■■□□ 2.78
COMMD5-207ENST00000543949 KIF14Q15058 1648 aa32.43■■■□□ 2.78
COMMD5-207ENST00000543949 RRBP1Q9P2E9 1410 aaKnown RBP32.39■■■□□ 2.78
COMMD5-207ENST00000543949 CYB5RLQ6IPT4 315 aa32.38■■■□□ 2.77
COMMD5-207ENST00000543949 NPM1P06748 294 aaKnown RBP eCLIP32.37■■■□□ 2.77
COMMD5-207ENST00000543949 MYOM3Q5VTT5 1437 aa32.35■■■□□ 2.77
COMMD5-207ENST00000543949 CCNB3Q8WWL7 1395 aa32.32■■■□□ 2.76
COMMD5-207ENST00000543949 ITSN2Q9NZM3 1697 aa32.3■■■□□ 2.76
COMMD5-207ENST00000543949 FGD6Q6ZV73 1430 aa32.29■■■□□ 2.76
COMMD5-207ENST00000543949 WDR7Q9Y4E6 1490 aa32.28■■■□□ 2.76
COMMD5-207ENST00000543949 ABCC10Q5T3U5 1492 aa32.26■■■□□ 2.75
COMMD5-207ENST00000543949 ASXL2Q76L83 1435 aa32.24■■■□□ 2.75
COMMD5-207ENST00000543949 MIA2Q96PC5 1412 aa32.22■■■□□ 2.75
COMMD5-207ENST00000543949 CDC42BPAQ5VT25 1732 aa32.21■■■□□ 2.75
COMMD5-207ENST00000543949 PTPN23Q9H3S7 1636 aa32.2■■■□□ 2.75
COMMD5-207ENST00000543949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.2■■■□□ 2.74
COMMD5-207ENST00000543949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.19■■■□□ 2.74
COMMD5-207ENST00000543949 KCNH8Q96L42 1107 aa32.19■■■□□ 2.74
COMMD5-207ENST00000543949 GPATCH8Q9UKJ3 1502 aaKnown RBP32.18■■■□□ 2.74
COMMD5-207ENST00000543949 TTC37Q6PGP7 1564 aa32.17■■■□□ 2.74
COMMD5-207ENST00000543949 MAPKBP1O60336 1514 aa32.16■■■□□ 2.74
COMMD5-207ENST00000543949 FAM50AQ14320 339 aaKnown RBP32.15■■■□□ 2.74
COMMD5-207ENST00000543949 MYO5CQ9NQX4 1742 aa32.14■■■□□ 2.74
COMMD5-207ENST00000543949 PREX2Q70Z35 1606 aa32.13■■■□□ 2.73
COMMD5-207ENST00000543949 TCOF1Q13428 1488 aaKnown RBP32.13■■■□□ 2.73
COMMD5-207ENST00000543949 CFDP1Q9UEE9 299 aaPredicted RBP32.1■■■□□ 2.73
COMMD5-207ENST00000543949 ABCA9Q8IUA7 1624 aa32.08■■■□□ 2.73
COMMD5-207ENST00000543949 CDC42BPBQ9Y5S2 1711 aa32.08■■■□□ 2.73
COMMD5-207ENST00000543949 CAMSAP2Q08AD1 1489 aa32.01■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms