RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 CCNB3Q8WWL7 1395 aa24■■□□□ 1.43
SCNN1A-221ENST00000543768 TDRD9Q8NDG6 1382 aaKnown RBP23.97■■□□□ 1.43
SCNN1A-221ENST00000543768 EFCAB5A4FU69 1503 aa23.97■■□□□ 1.43
SCNN1A-221ENST00000543768 DIEXFQ68CQ4 756 aaKnown RBP23.96■■□□□ 1.43
SCNN1A-221ENST00000543768 P3H3Q8IVL6 736 aa23.96■■□□□ 1.43
SCNN1A-221ENST00000543768 LRRC9Q6ZRR7 1453 aa23.96■■□□□ 1.43
SCNN1A-221ENST00000543768 PCF11O94913 1555 aaKnown RBP23.96■■□□□ 1.43
SCNN1A-221ENST00000543768 GAPVD1Q14C86 1478 aa23.95■■□□□ 1.42
SCNN1A-221ENST00000543768 CFAP43Q8NDM7 1665 aa23.94■■□□□ 1.42
SCNN1A-221ENST00000543768 FHOD3Q2V2M9 1422 aa23.94■■□□□ 1.42
SCNN1A-221ENST00000543768 DHX57Q6P158 1386 aaKnown RBP23.92■■□□□ 1.42
SCNN1A-221ENST00000543768 ZNF316A6NFI3 1004 aaPredicted RBP23.92■■□□□ 1.42
SCNN1A-221ENST00000543768 TARBP1Q13395 1621 aaKnown RBP23.9■■□□□ 1.42
SCNN1A-221ENST00000543768 CLSPNQ9HAW4 1339 aa23.9■■□□□ 1.42
SCNN1A-221ENST00000543768 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
SCNN1A-221ENST00000543768 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.414e-8■■■■■ 31.9
SCNN1A-221ENST00000543768 CASKIN1Q8WXD9 1431 aa23.85■■□□□ 1.41
SCNN1A-221ENST00000543768 PHLDB1Q86UU1 1377 aa23.84■■□□□ 1.41
SCNN1A-221ENST00000543768 SCAF1Q9H7N4 1312 aaKnown RBP23.82■■□□□ 1.4
SCNN1A-221ENST00000543768 SAMD9Q5K651 1589 aa23.8■■□□□ 1.4
SCNN1A-221ENST00000543768 ATP1B4Q9UN42 357 aaPredicted RBP23.79■■□□□ 1.4
SCNN1A-221ENST00000543768 FMN1Q68DA7 1419 aa23.79■■□□□ 1.4
SCNN1A-221ENST00000543768 ITGAEP38570 1179 aa23.79■■□□□ 1.4
SCNN1A-221ENST00000543768 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
SCNN1A-221ENST00000543768 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
SCNN1A-221ENST00000543768 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
SCNN1A-221ENST00000543768 RAB3GAP2Q9H2M9 1393 aa23.71■■□□□ 1.39
SCNN1A-221ENST00000543768 LRRIQ1Q96JM4 1722 aa23.68■■□□□ 1.38
SCNN1A-221ENST00000543768 FAM50AQ14320 339 aaKnown RBP23.66■■□□□ 1.38
SCNN1A-221ENST00000543768 SETD5Q9C0A6 1442 aa23.66■■□□□ 1.38
SCNN1A-221ENST00000543768 GRIN2BQ13224 1484 aa23.64■■□□□ 1.38
SCNN1A-221ENST00000543768 ADAMTS12P58397 1594 aa23.64■■□□□ 1.38
SCNN1A-221ENST00000543768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.63■■□□□ 1.37
SCNN1A-221ENST00000543768 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
SCNN1A-221ENST00000543768 WDR62O43379 1518 aa23.6■■□□□ 1.37
SCNN1A-221ENST00000543768 MAPKBP1O60336 1514 aa23.59■■□□□ 1.37
SCNN1A-221ENST00000543768 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
SCNN1A-221ENST00000543768 MTUS2Q5JR59 1369 aa23.58■■□□□ 1.36
SCNN1A-221ENST00000543768 IQGAP2Q13576 1575 aa23.57■■□□□ 1.36
SCNN1A-221ENST00000543768 FGD6Q6ZV73 1430 aa23.56■■□□□ 1.36
SCNN1A-221ENST00000543768 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
SCNN1A-221ENST00000543768 ACIN1Q9UKV3 1341 aaKnown RBP23.53■■□□□ 1.36
SCNN1A-221ENST00000543768 NEUROD1Q13562 356 aa23.51■■□□□ 1.35
SCNN1A-221ENST00000543768 NCOA2Q15596 1464 aa23.49■■□□□ 1.35
SCNN1A-221ENST00000543768 MIER1Q8N108 512 aa23.49■■□□□ 1.35
SCNN1A-221ENST00000543768 EHBP1L1Q8N3D4 1523 aa23.49■■□□□ 1.35
SCNN1A-221ENST00000543768 SUPT6HQ7KZ85 1726 aaKnown RBP23.49■■□□□ 1.35
SCNN1A-221ENST00000543768 CCDC18Q5T9S5 1454 aa23.46■■□□□ 1.35
SCNN1A-221ENST00000543768 MAGI3Q5TCQ9 1506 aa23.46■■□□□ 1.35
SCNN1A-221ENST00000543768 MYOM3Q5VTT5 1437 aa23.45■■□□□ 1.35
SCNN1A-221ENST00000543768 UGGT2Q9NYU1 1516 aa23.45■■□□□ 1.34
SCNN1A-221ENST00000543768 HECW1Q76N89 1606 aa23.44■■□□□ 1.34
SCNN1A-221ENST00000543768 CENPBP07199 599 aaPredicted RBP23.44■■□□□ 1.34
SCNN1A-221ENST00000543768 ARHGEF11O15085 1522 aa23.44■■□□□ 1.34
SCNN1A-221ENST00000543768 MYT1Q01538 1121 aa23.42■■□□□ 1.34
SCNN1A-221ENST00000543768 PTPRKQ15262 1439 aa23.42■■□□□ 1.34
SCNN1A-221ENST00000543768 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
SCNN1A-221ENST00000543768 EPRSP07814 1512 aaKnown RBP23.39■■□□□ 1.34
SCNN1A-221ENST00000543768 KIAA0586Q9BVV6 1533 aa23.39■■□□□ 1.33
SCNN1A-221ENST00000543768 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
SCNN1A-221ENST00000543768 PTPN23Q9H3S7 1636 aa23.36■■□□□ 1.33
SCNN1A-221ENST00000543768 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
SCNN1A-221ENST00000543768 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
SCNN1A-221ENST00000543768 SIN3AQ96ST3 1273 aa23.35■■□□□ 1.33
SCNN1A-221ENST00000543768 DISP1Q96F81 1524 aa23.34■■□□□ 1.33
SCNN1A-221ENST00000543768 CDK13Q14004 1512 aaKnown RBP23.33■■□□□ 1.33
SCNN1A-221ENST00000543768 KIAA0556O60303 1618 aa23.33■■□□□ 1.32
SCNN1A-221ENST00000543768 NAIPQ13075 1403 aa23.3■■□□□ 1.32
SCNN1A-221ENST00000543768 TCOF1Q13428 1488 aaKnown RBP23.3■■□□□ 1.32
SCNN1A-221ENST00000543768 MAGI1Q96QZ7 1491 aaPredicted RBP23.29■■□□□ 1.32
SCNN1A-221ENST00000543768 TIMELESSQ9UNS1 1208 aa23.27■■□□□ 1.32
SCNN1A-221ENST00000543768 UACAQ9BZF9 1416 aa23.26■■□□□ 1.31
SCNN1A-221ENST00000543768 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
SCNN1A-221ENST00000543768 SYNJ2O15056 1496 aa23.22■■□□□ 1.31
SCNN1A-221ENST00000543768 MIA2Q96PC5 1412 aa23.22■■□□□ 1.31
SCNN1A-221ENST00000543768 ARID3CA6NKF2 412 aa23.22■■□□□ 1.31
SCNN1A-221ENST00000543768 CEP170Q5SW79 1584 aa23.22■■□□□ 1.31
SCNN1A-221ENST00000543768 NUP153P49790 1475 aaKnown RBP23.21■■□□□ 1.31
SCNN1A-221ENST00000543768 RAPGEF6Q8TEU7 1601 aa23.2■■□□□ 1.31
SCNN1A-221ENST00000543768 GTF3C3Q9Y5Q9 886 aa23.2■■□□□ 1.3
SCNN1A-221ENST00000543768 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
SCNN1A-221ENST00000543768 GCC2Q8IWJ2 1684 aa23.17■■□□□ 1.3
SCNN1A-221ENST00000543768 PPP1R15AO75807 674 aaPredicted RBP23.16■■□□□ 1.3
SCNN1A-221ENST00000543768 AKNAQ7Z591 1439 aa23.14■■□□□ 1.3
SCNN1A-221ENST00000543768 RRP7BPQ9NSQ0 103 aa23.13■■□□□ 1.29
SCNN1A-221ENST00000543768 CHIC2Q9UKJ5 165 aa23.13■■□□□ 1.29
SCNN1A-221ENST00000543768 NUP160Q12769 1436 aa23.12■■□□□ 1.29
SCNN1A-221ENST00000543768 FBLN2P98095 1184 aa23.09■■□□□ 1.29
SCNN1A-221ENST00000543768 KDM6BO15054 1643 aa23.08■■□□□ 1.29
SCNN1A-221ENST00000543768 PLB1Q6P1J6 1458 aa23.06■■□□□ 1.28
SCNN1A-221ENST00000543768 TONSLQ96HA7 1378 aa23.06■■□□□ 1.28
SCNN1A-221ENST00000543768 CDK11AQ9UQ88 783 aaPredicted RBP23.06■■□□□ 1.28
SCNN1A-221ENST00000543768 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
SCNN1A-221ENST00000543768 DENND4BO75064 1496 aaPredicted RBP23.04■■□□□ 1.28
SCNN1A-221ENST00000543768 CARMIL2Q6F5E8 1435 aa23.03■■□□□ 1.28
SCNN1A-221ENST00000543768 DNMT1P26358 1616 aaKnown RBP23.03■■□□□ 1.28
SCNN1A-221ENST00000543768 DAPK1P53355 1430 aa23.03■■□□□ 1.28
SCNN1A-221ENST00000543768 TROQ12816 1431 aaPredicted RBP23.02■■□□□ 1.28
SCNN1A-221ENST00000543768 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
SCNN1A-221ENST00000543768 ABCC5O15440 1437 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms