RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 NISCHQ9Y2I1 1504 aa34.48■■■■□ 3.11
SCNN1A-221ENST00000543768 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
SCNN1A-221ENST00000543768 ZCCHC6Q5VYS8 1495 aaKnown RBP29.12■■■□□ 2.25
SCNN1A-221ENST00000543768 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
SCNN1A-221ENST00000543768 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
SCNN1A-221ENST00000543768 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
SCNN1A-221ENST00000543768 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
SCNN1A-221ENST00000543768 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
SCNN1A-221ENST00000543768 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
SCNN1A-221ENST00000543768 ABCC9O60706 1549 aa27.46■■□□□ 1.99
SCNN1A-221ENST00000543768 NACADO15069 1562 aa27.38■■□□□ 1.97
SCNN1A-221ENST00000543768 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
SCNN1A-221ENST00000543768 RSF1Q96T23 1441 aaPredicted RBP27.11■■□□□ 1.93
SCNN1A-221ENST00000543768 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
SCNN1A-221ENST00000543768 CECR2Q9BXF3 1484 aa26.85■■□□□ 1.89
SCNN1A-221ENST00000543768 MROH2BQ7Z745 1585 aa26.75■■□□□ 1.87
SCNN1A-221ENST00000543768 UNC13AQ9UPW8 1703 aa26.6■■□□□ 1.85
SCNN1A-221ENST00000543768 WIZO95785 1651 aa26.59■■□□□ 1.85
SCNN1A-221ENST00000543768 BAZ1AQ9NRL2 1556 aaPredicted RBP26.52■■□□□ 1.84
SCNN1A-221ENST00000543768 LOC105371045A0A1W2PR82 267 aa26.46■■□□□ 1.83
SCNN1A-221ENST00000543768 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
SCNN1A-221ENST00000543768 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
SCNN1A-221ENST00000543768 BICRAQ9NZM4 1560 aa26.26■■□□□ 1.79
SCNN1A-221ENST00000543768 TOP2AP11388 1531 aaKnown RBP26.22■■□□□ 1.79
SCNN1A-221ENST00000543768 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
SCNN1A-221ENST00000543768 PABPN1Q86U42 306 aaKnown RBP eCLIP26.14■■□□□ 1.77
SCNN1A-221ENST00000543768 PCGF6Q9BYE7 350 aa26.06■■□□□ 1.76
SCNN1A-221ENST00000543768 CCDC88BA6NC98 1476 aa26.05■■□□□ 1.76
SCNN1A-221ENST00000543768 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
SCNN1A-221ENST00000543768 FAM9AQ8IZU1 332 aaPredicted RBP26.02■■□□□ 1.76
SCNN1A-221ENST00000543768 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
SCNN1A-221ENST00000543768 HRCP23327 699 aa25.9■■□□□ 1.74
SCNN1A-221ENST00000543768 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
SCNN1A-221ENST00000543768 TRIM26Q12899 539 aaPredicted RBP25.75■■□□□ 1.71
SCNN1A-221ENST00000543768 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
SCNN1A-221ENST00000543768 EHMT2Q96KQ7 1210 aa25.71■■□□□ 1.71
SCNN1A-221ENST00000543768 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
SCNN1A-221ENST00000543768 SOGA1O94964 1423 aa25.51■■□□□ 1.67
SCNN1A-221ENST00000543768 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
SCNN1A-221ENST00000543768 EEA1Q15075 1411 aa25.42■■□□□ 1.66
SCNN1A-221ENST00000543768 RUSC2Q8N2Y8 1516 aa25.4■■□□□ 1.66
SCNN1A-221ENST00000543768 SYNJ1O43426 1573 aa25.37■■□□□ 1.65
SCNN1A-221ENST00000543768 CSRNP3Q8WYN3 585 aa25.34■■□□□ 1.65
SCNN1A-221ENST00000543768 NCAPD3P42695 1498 aa25.32■■□□□ 1.64
SCNN1A-221ENST00000543768 PPARGC1BQ86YN6 1023 aaKnown RBP25.32■■□□□ 1.64
SCNN1A-221ENST00000543768 HMGXB3Q12766 1538 aa25.31■■□□□ 1.64
SCNN1A-221ENST00000543768 TNIKQ9UKE5 1360 aa25.28■■□□□ 1.64
SCNN1A-221ENST00000543768 CEP162Q5TB80 1403 aa25.24■■□□□ 1.63
SCNN1A-221ENST00000543768 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
SCNN1A-221ENST00000543768 TOP2BQ02880 1626 aa25.14■■□□□ 1.62
SCNN1A-221ENST00000543768 UBTFP17480 764 aaKnown RBP25.13■■□□□ 1.61
SCNN1A-221ENST00000543768 KIF21BO75037 1637 aa25.1■■□□□ 1.61
SCNN1A-221ENST00000543768 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
SCNN1A-221ENST00000543768 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.61
SCNN1A-221ENST00000543768 ZEB1P37275 1124 aaPredicted RBP25.04■■□□□ 1.6
SCNN1A-221ENST00000543768 CFTRP13569 1480 aa25.01■■□□□ 1.59
SCNN1A-221ENST00000543768 CUX1P39880 1505 aa24.93■■□□□ 1.58
SCNN1A-221ENST00000543768 RAPGEF2Q9Y4G8 1499 aa24.92■■□□□ 1.58
SCNN1A-221ENST00000543768 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
SCNN1A-221ENST00000543768 CLIP1P30622 1438 aa24.85■■□□□ 1.57
SCNN1A-221ENST00000543768 CC2D2AQ9P2K1 1620 aa24.82■■□□□ 1.56
SCNN1A-221ENST00000543768 TTBK1Q5TCY1 1321 aaPredicted RBP24.81■■□□□ 1.56
SCNN1A-221ENST00000543768 PRXQ9BXM0 1461 aa24.78■■□□□ 1.56
SCNN1A-221ENST00000543768 ERICH3Q5RHP9 1530 aa24.77■■□□□ 1.56
SCNN1A-221ENST00000543768 CADPSQ9ULU8 1353 aa24.77■■□□□ 1.56
SCNN1A-221ENST00000543768 VPS8Q8N3P4 1428 aa24.73■■□□□ 1.55
SCNN1A-221ENST00000543768 KIF27Q86VH2 1401 aa24.72■■□□□ 1.55
SCNN1A-221ENST00000543768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.7■■□□□ 1.54
SCNN1A-221ENST00000543768 CCER1Q8TC90 406 aaPredicted RBP24.62■■□□□ 1.53
SCNN1A-221ENST00000543768 RANGAP1P46060 587 aaPredicted RBP24.59■■□□□ 1.53
SCNN1A-221ENST00000543768 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
SCNN1A-221ENST00000543768 CUX2O14529 1486 aa24.52■■□□□ 1.52
SCNN1A-221ENST00000543768 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
SCNN1A-221ENST00000543768 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
SCNN1A-221ENST00000543768 APLP2Q06481 763 aa24.5■■□□□ 1.51
SCNN1A-221ENST00000543768 IGF1RP08069 1367 aa24.49■■□□□ 1.51
SCNN1A-221ENST00000543768 NESP48681 1621 aa24.4■■□□□ 1.5
SCNN1A-221ENST00000543768 DNMBPQ6XZF7 1577 aa24.38■■□□□ 1.49
SCNN1A-221ENST00000543768 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
SCNN1A-221ENST00000543768 CARMIL1Q5VZK9 1371 aa24.36■■□□□ 1.49
SCNN1A-221ENST00000543768 PELP1Q8IZL8 1130 aaKnown RBP24.36■■□□□ 1.49
SCNN1A-221ENST00000543768 TOPBP1Q92547 1522 aa24.33■■□□□ 1.49
SCNN1A-221ENST00000543768 HNRNPUL2Q1KMD3 747 aaKnown RBP24.33■■□□□ 1.49
SCNN1A-221ENST00000543768 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
SCNN1A-221ENST00000543768 POLA1P09884 1462 aaPredicted RBP24.29■■□□□ 1.48
SCNN1A-221ENST00000543768 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
SCNN1A-221ENST00000543768 ABCA10Q8WWZ4 1543 aa24.28■■□□□ 1.48
SCNN1A-221ENST00000543768 KANK4Q5T7N3 995 aaPredicted RBP24.28■■□□□ 1.48
SCNN1A-221ENST00000543768 URB2Q14146 1524 aaKnown RBP24.18■■□□□ 1.46
SCNN1A-221ENST00000543768 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
SCNN1A-221ENST00000543768 WDR97A6NE52 1622 aa24.13■■□□□ 1.45
SCNN1A-221ENST00000543768 RRBP1Q9P2E9 1410 aaKnown RBP24.13■■□□□ 1.45
SCNN1A-221ENST00000543768 CUL7Q14999 1698 aa24.11■■□□□ 1.45
SCNN1A-221ENST00000543768 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
SCNN1A-221ENST00000543768 MAP3K1Q13233 1512 aa24.08■■□□□ 1.45
SCNN1A-221ENST00000543768 TIAM1Q13009 1591 aa24.06■■□□□ 1.44
SCNN1A-221ENST00000543768 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
SCNN1A-221ENST00000543768 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
SCNN1A-221ENST00000543768 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
SCNN1A-221ENST00000543768 CTTNBP2Q8WZ74 1663 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms