RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 CTTNBP2Q8WZ74 1663 aa23.97■■□□□ 1.43
TMEM258-207ENST00000543510 CEP170Q5SW79 1584 aa23.87■■□□□ 1.41
TMEM258-207ENST00000543510 CEP162Q5TB80 1403 aa23.86■■□□□ 1.41
TMEM258-207ENST00000543510 IQGAP2Q13576 1575 aa23.8■■□□□ 1.4
TMEM258-207ENST00000543510 CLIP1P30622 1438 aa23.79■■□□□ 1.4
TMEM258-207ENST00000543510 NUP160Q12769 1436 aa23.78■■□□□ 1.4
TMEM258-207ENST00000543510 KIAA0586Q9BVV6 1533 aa23.76■■□□□ 1.39
TMEM258-207ENST00000543510 P3H3Q8IVL6 736 aa23.73■■□□□ 1.39
TMEM258-207ENST00000543510 ARHGAP35Q9NRY4 1499 aa23.66■■□□□ 1.38
TMEM258-207ENST00000543510 OSCARQ8IYS5 282 aa23.66■■□□□ 1.38
TMEM258-207ENST00000543510 JPH4Q96JJ6 628 aa23.64■■□□□ 1.38
TMEM258-207ENST00000543510 EFCAB5A4FU69 1503 aa23.63■■□□□ 1.37
TMEM258-207ENST00000543510 CLASP1Q7Z460 1538 aa23.62■■□□□ 1.37
TMEM258-207ENST00000543510 UGGT2Q9NYU1 1516 aa23.62■■□□□ 1.37
TMEM258-207ENST00000543510 TTBK1Q5TCY1 1321 aaPredicted RBP23.61■■□□□ 1.37
TMEM258-207ENST00000543510 SAMD9Q5K651 1589 aa23.61■■□□□ 1.37
TMEM258-207ENST00000543510 FHOD3Q2V2M9 1422 aa23.6■■□□□ 1.37
TMEM258-207ENST00000543510 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
TMEM258-207ENST00000543510 KIAA0556O60303 1618 aa23.56■■□□□ 1.36
TMEM258-207ENST00000543510 PRG4Q92954 1404 aaPredicted RBP23.55■■□□□ 1.36
TMEM258-207ENST00000543510 DISP1Q96F81 1524 aa23.55■■□□□ 1.36
TMEM258-207ENST00000543510 SHROOM2Q13796 1616 aa23.54■■□□□ 1.36
TMEM258-207ENST00000543510 CARMIL2Q6F5E8 1435 aa23.54■■□□□ 1.36
TMEM258-207ENST00000543510 VPS8Q8N3P4 1428 aa23.49■■□□□ 1.35
TMEM258-207ENST00000543510 ATP1B4Q9UN42 357 aaPredicted RBP23.48■■□□□ 1.35
TMEM258-207ENST00000543510 ERCC6L2Q5T890 1561 aa23.47■■□□□ 1.35
TMEM258-207ENST00000543510 FMN1Q68DA7 1419 aa23.42■■□□□ 1.34
TMEM258-207ENST00000543510 PCF11O94913 1555 aaKnown RBP23.4■■□□□ 1.34
TMEM258-207ENST00000543510 APLP2Q06481 763 aa23.36■■□□□ 1.33
TMEM258-207ENST00000543510 PTPRGP23470 1445 aa23.35■■□□□ 1.33
TMEM258-207ENST00000543510 PPARGC1BQ86YN6 1023 aaKnown RBP23.34■■□□□ 1.33
TMEM258-207ENST00000543510 ARID3CA6NKF2 412 aa23.32■■□□□ 1.32
TMEM258-207ENST00000543510 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
TMEM258-207ENST00000543510 PCGF6Q9BYE7 350 aa23.32■■□□□ 1.32
TMEM258-207ENST00000543510 CASKIN1Q8WXD9 1431 aa23.31■■□□□ 1.32
TMEM258-207ENST00000543510 FYCO1Q9BQS8 1478 aa23.3■■□□□ 1.32
TMEM258-207ENST00000543510 RAPGEF6Q8TEU7 1601 aa23.3■■□□□ 1.32
TMEM258-207ENST00000543510 PLB1Q6P1J6 1458 aa23.29■■□□□ 1.32
TMEM258-207ENST00000543510 HECW1Q76N89 1606 aa23.27■■□□□ 1.32
TMEM258-207ENST00000543510 ARHGEF11O15085 1522 aa23.26■■□□□ 1.31
TMEM258-207ENST00000543510 LRRIQ1Q96JM4 1722 aa23.25■■□□□ 1.31
TMEM258-207ENST00000543510 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
TMEM258-207ENST00000543510 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
TMEM258-207ENST00000543510 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
TMEM258-207ENST00000543510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.22■■□□□ 1.31
TMEM258-207ENST00000543510 HNRNPUL2Q1KMD3 747 aaKnown RBP23.22■■□□□ 1.31
TMEM258-207ENST00000543510 ABCA8O94911 1581 aa23.21■■□□□ 1.31
TMEM258-207ENST00000543510 UACAQ9BZF9 1416 aa23.19■■□□□ 1.3
TMEM258-207ENST00000543510 CFAP43Q8NDM7 1665 aa23.18■■□□□ 1.3
TMEM258-207ENST00000543510 TIAM1Q13009 1591 aa23.18■■□□□ 1.3
TMEM258-207ENST00000543510 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
TMEM258-207ENST00000543510 CDK13Q14004 1512 aaKnown RBP23.17■■□□□ 1.3
TMEM258-207ENST00000543510 EPRSP07814 1512 aaKnown RBP23.16■■□□□ 1.3
TMEM258-207ENST00000543510 CCDC18Q5T9S5 1454 aa23.14■■□□□ 1.3
TMEM258-207ENST00000543510 ABCC2Q92887 1545 aa23.13■■□□□ 1.29
TMEM258-207ENST00000543510 KANK4Q5T7N3 995 aaPredicted RBP23.13■■□□□ 1.29
TMEM258-207ENST00000543510 CYB5RLQ6IPT4 315 aa23.11■■□□□ 1.29
TMEM258-207ENST00000543510 ADCY10Q96PN6 1610 aa23.09■■□□□ 1.29
TMEM258-207ENST00000543510 MAP3K1Q13233 1512 aa23.09■■□□□ 1.29
TMEM258-207ENST00000543510 MTUS2Q5JR59 1369 aa23.06■■□□□ 1.28
TMEM258-207ENST00000543510 ATP10BO94823 1461 aa23.06■■□□□ 1.28
TMEM258-207ENST00000543510 LRRC9Q6ZRR7 1453 aa23.06■■□□□ 1.28
TMEM258-207ENST00000543510 UHRF1BP1LA0JNW5 1464 aa23.05■■□□□ 1.28
TMEM258-207ENST00000543510 ZCCHC11Q5TAX3 1644 aaKnown RBP23.04■■□□□ 1.28
TMEM258-207ENST00000543510 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
TMEM258-207ENST00000543510 MAGI3Q5TCQ9 1506 aa23.01■■□□□ 1.27
TMEM258-207ENST00000543510 NPM1P06748 294 aaKnown RBP eCLIP22.99■■□□□ 1.27
TMEM258-207ENST00000543510 EHBP1L1Q8N3D4 1523 aa22.99■■□□□ 1.27
TMEM258-207ENST00000543510 PLEKHD1A6NEE1 506 aa22.98■■□□□ 1.27
TMEM258-207ENST00000543510 KDM5BQ9UGL1 1544 aa22.97■■□□□ 1.27
TMEM258-207ENST00000543510 SUPT6HQ7KZ85 1726 aaKnown RBP22.95■■□□□ 1.26
TMEM258-207ENST00000543510 TROQ12816 1431 aaPredicted RBP22.91■■□□□ 1.26
TMEM258-207ENST00000543510 KCNH8Q96L42 1107 aa22.89■■□□□ 1.25
TMEM258-207ENST00000543510 DNAJC5Q9H3Z4 198 aa22.88■■□□□ 1.25
TMEM258-207ENST00000543510 KIF14Q15058 1648 aa22.88■■□□□ 1.25
TMEM258-207ENST00000543510 NCOA2Q15596 1464 aa22.88■■□□□ 1.25
TMEM258-207ENST00000543510 ASXL2Q76L83 1435 aa22.83■■□□□ 1.25
TMEM258-207ENST00000543510 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.24
TMEM258-207ENST00000543510 WDR7Q9Y4E6 1490 aa22.81■■□□□ 1.24
TMEM258-207ENST00000543510 CCNB3Q8WWL7 1395 aa22.78■■□□□ 1.24
TMEM258-207ENST00000543510 MYOM3Q5VTT5 1437 aa22.73■■□□□ 1.23
TMEM258-207ENST00000543510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.73■■□□□ 1.231e-9■■■■■ 62
TMEM258-207ENST00000543510 TTC37Q6PGP7 1564 aa22.73■■□□□ 1.23
TMEM258-207ENST00000543510 ITSN2Q9NZM3 1697 aa22.73■■□□□ 1.23
TMEM258-207ENST00000543510 CDC42BPAQ5VT25 1732 aa22.72■■□□□ 1.23
TMEM258-207ENST00000543510 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
TMEM258-207ENST00000543510 MAPKBP1O60336 1514 aa22.72■■□□□ 1.23
TMEM258-207ENST00000543510 HRCP23327 699 aa22.71■■□□□ 1.23
TMEM258-207ENST00000543510 ABCC10Q5T3U5 1492 aa22.71■■□□□ 1.23
TMEM258-207ENST00000543510 MYO5CQ9NQX4 1742 aa22.7■■□□□ 1.22
TMEM258-207ENST00000543510 FGD6Q6ZV73 1430 aa22.69■■□□□ 1.22
TMEM258-207ENST00000543510 ZNF777Q9ULD5 760 aaPredicted RBP22.68■■□□□ 1.22
TMEM258-207ENST00000543510 GPATCH8Q9UKJ3 1502 aaKnown RBP22.68■■□□□ 1.22
TMEM258-207ENST00000543510 CFDP1Q9UEE9 299 aaPredicted RBP22.67■■□□□ 1.22
TMEM258-207ENST00000543510 RRBP1Q9P2E9 1410 aaKnown RBP22.67■■□□□ 1.22
TMEM258-207ENST00000543510 PTPN23Q9H3S7 1636 aa22.67■■□□□ 1.22
TMEM258-207ENST00000543510 ITGAEP38570 1179 aa22.66■■□□□ 1.22
TMEM258-207ENST00000543510 CDC42BPBQ9Y5S2 1711 aa22.65■■□□□ 1.22
TMEM258-207ENST00000543510 PREX2Q70Z35 1606 aa22.64■■□□□ 1.22
TMEM258-207ENST00000543510 ABCA9Q8IUA7 1624 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms