RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 EFCAB5A4FU69 1503 aa31.01■■■□□ 2.56
ME3-212ENST00000543262 FHAD1B1AJZ9 1412 aa31.01■■■□□ 2.55
ME3-212ENST00000543262 MAP3K1Q13233 1512 aa31■■■□□ 2.55
ME3-212ENST00000543262 TIAM1Q13009 1591 aa30.99■■■□□ 2.55
ME3-212ENST00000543262 FHOD3Q2V2M9 1422 aa30.97■■■□□ 2.55
ME3-212ENST00000543262 PBRM1Q86U86 1689 aa30.95■■■□□ 2.55
ME3-212ENST00000543262 PCF11O94913 1555 aaKnown RBP30.93■■■□□ 2.54
ME3-212ENST00000543262 RRBP1Q9P2E9 1410 aaKnown RBP30.93■■■□□ 2.54
ME3-212ENST00000543262 AQRO60306 1485 aaKnown RBP eCLIP30.92■■■□□ 2.54
ME3-212ENST00000543262 WDR62O43379 1518 aa30.91■■■□□ 2.54
ME3-212ENST00000543262 LRRC9Q6ZRR7 1453 aa30.85■■■□□ 2.53
ME3-212ENST00000543262 CFAP43Q8NDM7 1665 aa30.85■■■□□ 2.53
ME3-212ENST00000543262 IFT140Q96RY7 1462 aa30.84■■■□□ 2.53
ME3-212ENST00000543262 FYCO1Q9BQS8 1478 aa30.83■■■□□ 2.53
ME3-212ENST00000543262 ATP1B4Q9UN42 357 aaPredicted RBP30.82■■■□□ 2.52
ME3-212ENST00000543262 CASKIN1Q8WXD9 1431 aa30.82■■■□□ 2.52
ME3-212ENST00000543262 SAMD9Q5K651 1589 aa30.82■■■□□ 2.52
ME3-212ENST00000543262 CCNB3Q8WWL7 1395 aa30.81■■■□□ 2.52
ME3-212ENST00000543262 GRIN2BQ13224 1484 aa30.8■■■□□ 2.52
ME3-212ENST00000543262 ERCC6Q03468 1493 aa30.79■■■□□ 2.52
ME3-212ENST00000543262 ADAMTS12P58397 1594 aa30.79■■■□□ 2.52
ME3-212ENST00000543262 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
ME3-212ENST00000543262 FMN1Q68DA7 1419 aa30.78■■■□□ 2.52
ME3-212ENST00000543262 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
ME3-212ENST00000543262 THOC2Q8NI27 1593 aaKnown RBP30.68■■■□□ 2.5
ME3-212ENST00000543262 PHLDB1Q86UU1 1377 aa30.67■■■□□ 2.5
ME3-212ENST00000543262 IQGAP2Q13576 1575 aa30.64■■■□□ 2.49
ME3-212ENST00000543262 EIF4G3O43432 1585 aaKnown RBP30.62■■■□□ 2.49
ME3-212ENST00000543262 ITGAEP38570 1179 aa30.61■■■□□ 2.49
ME3-212ENST00000543262 LRRIQ1Q96JM4 1722 aa30.59■■■□□ 2.49
ME3-212ENST00000543262 DHX57Q6P158 1386 aaKnown RBP30.54■■■□□ 2.48
ME3-212ENST00000543262 FAM50AQ14320 339 aaKnown RBP30.48■■■□□ 2.47
ME3-212ENST00000543262 MTUS2Q5JR59 1369 aa30.47■■■□□ 2.47
ME3-212ENST00000543262 CLSPNQ9HAW4 1339 aa30.47■■■□□ 2.47
ME3-212ENST00000543262 UGGT2Q9NYU1 1516 aa30.46■■■□□ 2.47
ME3-212ENST00000543262 GRIN2AQ12879 1464 aa30.46■■■□□ 2.47
ME3-212ENST00000543262 KIAA0586Q9BVV6 1533 aa30.44■■■□□ 2.46
ME3-212ENST00000543262 MAGI1Q96QZ7 1491 aaPredicted RBP30.42■■■□□ 2.46
ME3-212ENST00000543262 RAB3GAP2Q9H2M9 1393 aa30.38■■■□□ 2.45
ME3-212ENST00000543262 HECW1Q76N89 1606 aa30.37■■■□□ 2.45
ME3-212ENST00000543262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.37■■■□□ 2.45
ME3-212ENST00000543262 CCDC18Q5T9S5 1454 aa30.37■■■□□ 2.45
ME3-212ENST00000543262 FGD6Q6ZV73 1430 aa30.35■■■□□ 2.45
ME3-212ENST00000543262 SETD5Q9C0A6 1442 aa30.35■■■□□ 2.45
ME3-212ENST00000543262 EHBP1L1Q8N3D4 1523 aa30.34■■■□□ 2.45
ME3-212ENST00000543262 SYNJ2O15056 1496 aa30.34■■■□□ 2.45
ME3-212ENST00000543262 CHMP7Q8WUX9 453 aaPredicted RBP30.33■■■□□ 2.45
ME3-212ENST00000543262 SUPT6HQ7KZ85 1726 aaKnown RBP30.33■■■□□ 2.45
ME3-212ENST00000543262 NCOA2Q15596 1464 aa30.33■■■□□ 2.45
ME3-212ENST00000543262 ZNF316A6NFI3 1004 aaPredicted RBP30.32■■■□□ 2.44
ME3-212ENST00000543262 DISP1Q96F81 1524 aa30.32■■■□□ 2.44
ME3-212ENST00000543262 KIAA0556O60303 1618 aa30.31■■■□□ 2.44
ME3-212ENST00000543262 MAGI3Q5TCQ9 1506 aa30.31■■■□□ 2.44
ME3-212ENST00000543262 EPRSP07814 1512 aaKnown RBP30.29■■■□□ 2.44
ME3-212ENST00000543262 DIEXFQ68CQ4 756 aaKnown RBP30.28■■■□□ 2.44
ME3-212ENST00000543262 CEP170Q5SW79 1584 aa30.27■■■□□ 2.44
ME3-212ENST00000543262 FBLN2P98095 1184 aa30.25■■■□□ 2.43
ME3-212ENST00000543262 MYOM3Q5VTT5 1437 aa30.25■■■□□ 2.43
ME3-212ENST00000543262 CDK13Q14004 1512 aaKnown RBP30.22■■■□□ 2.43
ME3-212ENST00000543262 ARHGEF11O15085 1522 aa30.22■■■□□ 2.43
ME3-212ENST00000543262 ARID3CA6NKF2 412 aa30.17■■■□□ 2.42
ME3-212ENST00000543262 NUP160Q12769 1436 aa30.16■■■□□ 2.42
ME3-212ENST00000543262 MAPKBP1O60336 1514 aa30.15■■■□□ 2.42
ME3-212ENST00000543262 PTPN23Q9H3S7 1636 aa30.13■■■□□ 2.41
ME3-212ENST00000543262 RAPGEF6Q8TEU7 1601 aa30.12■■■□□ 2.41
ME3-212ENST00000543262 PTPRKQ15262 1439 aa30.11■■■□□ 2.41
ME3-212ENST00000543262 NUP153P49790 1475 aaKnown RBP30.1■■■□□ 2.41
ME3-212ENST00000543262 JPH4Q96JJ6 628 aa30.07■■■□□ 2.4
ME3-212ENST00000543262 CARMIL2Q6F5E8 1435 aa30.03■■■□□ 2.4
ME3-212ENST00000543262 TCOF1Q13428 1488 aaKnown RBP30.03■■■□□ 2.4
ME3-212ENST00000543262 HFM1A2PYH4 1435 aa30.02■■■□□ 2.4
ME3-212ENST00000543262 PLB1Q6P1J6 1458 aa29.98■■■□□ 2.39
ME3-212ENST00000543262 MIA2Q96PC5 1412 aa29.97■■■□□ 2.39
ME3-212ENST00000543262 NAIPQ13075 1403 aa29.95■■■□□ 2.38
ME3-212ENST00000543262 CDK11AQ9UQ88 783 aaPredicted RBP29.94■■■□□ 2.38
ME3-212ENST00000543262 SIN3AQ96ST3 1273 aa29.89■■■□□ 2.38
ME3-212ENST00000543262 CHD1O14646 1710 aa29.85■■■□□ 2.37
ME3-212ENST00000543262 PRG4Q92954 1404 aaPredicted RBP29.85■■■□□ 2.37
ME3-212ENST00000543262 UACAQ9BZF9 1416 aa29.85■■■□□ 2.37
ME3-212ENST00000543262 NEUROD1Q13562 356 aa29.85■■■□□ 2.37
ME3-212ENST00000543262 CHIC2Q9UKJ5 165 aa29.85■■■□□ 2.37
ME3-212ENST00000543262 TROQ12816 1431 aaPredicted RBP29.84■■■□□ 2.37
ME3-212ENST00000543262 RRP7BPQ9NSQ0 103 aa29.82■■■□□ 2.36
ME3-212ENST00000543262 ABCA8O94911 1581 aa29.81■■■□□ 2.36
ME3-212ENST00000543262 GCC2Q8IWJ2 1684 aa29.8■■■□□ 2.36
ME3-212ENST00000543262 AKNAQ7Z591 1439 aa29.77■■■□□ 2.36
ME3-212ENST00000543262 TIMELESSQ9UNS1 1208 aa29.76■■■□□ 2.35
ME3-212ENST00000543262 ADCY10Q96PN6 1610 aa29.75■■■□□ 2.35
ME3-212ENST00000543262 ZNF644Q9H582 1327 aaPredicted RBP29.75■■■□□ 2.35
ME3-212ENST00000543262 KIF14Q15058 1648 aa29.74■■■□□ 2.35
ME3-212ENST00000543262 DAPK1P53355 1430 aa29.72■■■□□ 2.35
ME3-212ENST00000543262 DNMT1P26358 1616 aaKnown RBP29.72■■■□□ 2.35
ME3-212ENST00000543262 MIER1Q8N108 512 aa29.72■■■□□ 2.35
ME3-212ENST00000543262 ATP10BO94823 1461 aa29.7■■■□□ 2.35
ME3-212ENST00000543262 ITSN2Q9NZM3 1697 aa29.7■■■□□ 2.35
ME3-212ENST00000543262 KDM6BO15054 1643 aa29.7■■■□□ 2.34
ME3-212ENST00000543262 ABCC5O15440 1437 aa29.69■■■□□ 2.34
ME3-212ENST00000543262 PTPRGP23470 1445 aa29.69■■■□□ 2.34
ME3-212ENST00000543262 GPATCH8Q9UKJ3 1502 aaKnown RBP29.68■■■□□ 2.34
ME3-212ENST00000543262 PLEKHD1A6NEE1 506 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms