RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 ERICH3Q5RHP9 1530 aa24.79■■□□□ 1.56
KDM2B-216ENST00000543025 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
KDM2B-216ENST00000543025 PRXQ9BXM0 1461 aa24.75■■□□□ 1.55
KDM2B-216ENST00000543025 GAPVD1Q14C86 1478 aa24.74■■□□□ 1.55
KDM2B-216ENST00000543025 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.552e-7■■■■■ 30.3
KDM2B-216ENST00000543025 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
KDM2B-216ENST00000543025 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
KDM2B-216ENST00000543025 IGF1RP08069 1367 aa24.67■■□□□ 1.54
KDM2B-216ENST00000543025 ARAP1Q96P48 1450 aa24.64■■□□□ 1.53
KDM2B-216ENST00000543025 GRIN2BQ13224 1484 aa24.63■■□□□ 1.53
KDM2B-216ENST00000543025 GTF3C3Q9Y5Q9 886 aa24.61■■□□□ 1.53
KDM2B-216ENST00000543025 CUL7Q14999 1698 aa24.6■■□□□ 1.53
KDM2B-216ENST00000543025 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
KDM2B-216ENST00000543025 ADAMTS12P58397 1594 aa24.53■■□□□ 1.52
KDM2B-216ENST00000543025 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
KDM2B-216ENST00000543025 CLSPNQ9HAW4 1339 aa24.52■■□□□ 1.52
KDM2B-216ENST00000543025 MAGI1Q96QZ7 1491 aaPredicted RBP24.48■■□□□ 1.51
KDM2B-216ENST00000543025 FHAD1B1AJZ9 1412 aa24.46■■□□□ 1.51
KDM2B-216ENST00000543025 KANK4Q5T7N3 995 aaPredicted RBP24.46■■□□□ 1.51
KDM2B-216ENST00000543025 MIER1Q8N108 512 aa24.44■■□□□ 1.5
KDM2B-216ENST00000543025 RRBP1Q9P2E9 1410 aaKnown RBP24.44■■□□□ 1.5
KDM2B-216ENST00000543025 DHX57Q6P158 1386 aaKnown RBP24.44■■□□□ 1.5
KDM2B-216ENST00000543025 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
KDM2B-216ENST00000543025 SYNJ2O15056 1496 aa24.39■■□□□ 1.49
KDM2B-216ENST00000543025 YTHDC1Q96MU7 727 aaKnown RBP24.38■■□□□ 1.49
KDM2B-216ENST00000543025 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
KDM2B-216ENST00000543025 CHD1O14646 1710 aa24.33■■□□□ 1.49
KDM2B-216ENST00000543025 CCNB3Q8WWL7 1395 aa24.31■■□□□ 1.48
KDM2B-216ENST00000543025 CTTNBP2Q8WZ74 1663 aa24.29■■□□□ 1.48
KDM2B-216ENST00000543025 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
KDM2B-216ENST00000543025 FBLN2P98095 1184 aa24.27■■□□□ 1.48
KDM2B-216ENST00000543025 MAP3K1Q13233 1512 aa24.22■■□□□ 1.47
KDM2B-216ENST00000543025 CEP170Q5SW79 1584 aa24.22■■□□□ 1.47
KDM2B-216ENST00000543025 TIAM1Q13009 1591 aa24.2■■□□□ 1.46
KDM2B-216ENST00000543025 NUP160Q12769 1436 aa24.18■■□□□ 1.46
KDM2B-216ENST00000543025 IQGAP2Q13576 1575 aa24.13■■□□□ 1.45
KDM2B-216ENST00000543025 KIAA0586Q9BVV6 1533 aa24.11■■□□□ 1.45
KDM2B-216ENST00000543025 ITGAEP38570 1179 aa24.1■■□□□ 1.45
KDM2B-216ENST00000543025 LRRC9Q6ZRR7 1453 aa24.09■■□□□ 1.45
KDM2B-216ENST00000543025 RAB3GAP2Q9H2M9 1393 aa24.08■■□□□ 1.45
KDM2B-216ENST00000543025 CFAP43Q8NDM7 1665 aa24.03■■□□□ 1.44
KDM2B-216ENST00000543025 MAPKBP1O60336 1514 aa24.02■■□□□ 1.44
KDM2B-216ENST00000543025 CLASP1Q7Z460 1538 aa24.02■■□□□ 1.44
KDM2B-216ENST00000543025 SETD5Q9C0A6 1442 aa24■■□□□ 1.43
KDM2B-216ENST00000543025 PHLDB1Q86UU1 1377 aa24■■□□□ 1.43
KDM2B-216ENST00000543025 UGGT2Q9NYU1 1516 aa24■■□□□ 1.43
KDM2B-216ENST00000543025 PCF11O94913 1555 aaKnown RBP23.99■■□□□ 1.43
KDM2B-216ENST00000543025 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
KDM2B-216ENST00000543025 EFCAB5A4FU69 1503 aa23.98■■□□□ 1.43
KDM2B-216ENST00000543025 SHROOM2Q13796 1616 aa23.95■■□□□ 1.42
KDM2B-216ENST00000543025 OSCARQ8IYS5 282 aa23.91■■□□□ 1.42
KDM2B-216ENST00000543025 JPH4Q96JJ6 628 aa23.91■■□□□ 1.42
KDM2B-216ENST00000543025 DISP1Q96F81 1524 aa23.91■■□□□ 1.42
KDM2B-216ENST00000543025 KIAA0556O60303 1618 aa23.91■■□□□ 1.42
KDM2B-216ENST00000543025 FYCO1Q9BQS8 1478 aa23.91■■□□□ 1.42
KDM2B-216ENST00000543025 FAM50AQ14320 339 aaKnown RBP23.89■■□□□ 1.41
KDM2B-216ENST00000543025 P3H3Q8IVL6 736 aa23.88■■□□□ 1.41
KDM2B-216ENST00000543025 FHOD3Q2V2M9 1422 aa23.88■■□□□ 1.41
KDM2B-216ENST00000543025 CASKIN1Q8WXD9 1431 aa23.85■■□□□ 1.41
KDM2B-216ENST00000543025 PRG4Q92954 1404 aaPredicted RBP23.84■■□□□ 1.41
KDM2B-216ENST00000543025 ATP1B4Q9UN42 357 aaPredicted RBP23.83■■□□□ 1.41
KDM2B-216ENST00000543025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.83■■□□□ 1.41
KDM2B-216ENST00000543025 ERCC6L2Q5T890 1561 aa23.81■■□□□ 1.4
KDM2B-216ENST00000543025 CARMIL2Q6F5E8 1435 aa23.81■■□□□ 1.4
KDM2B-216ENST00000543025 TIMELESSQ9UNS1 1208 aa23.78■■□□□ 1.4
KDM2B-216ENST00000543025 FMN1Q68DA7 1419 aa23.77■■□□□ 1.4
KDM2B-216ENST00000543025 SIN3AQ96ST3 1273 aa23.75■■□□□ 1.39
KDM2B-216ENST00000543025 SUPT16HQ9Y5B9 1047 aaKnown RBP23.71■■□□□ 1.39
KDM2B-216ENST00000543025 FGD6Q6ZV73 1430 aa23.7■■□□□ 1.38
KDM2B-216ENST00000543025 MYT1Q01538 1121 aa23.68■■□□□ 1.38
KDM2B-216ENST00000543025 MTUS2Q5JR59 1369 aa23.64■■□□□ 1.37
KDM2B-216ENST00000543025 PTPRGP23470 1445 aa23.62■■□□□ 1.37
KDM2B-216ENST00000543025 PPP1R15AO75807 674 aaPredicted RBP23.61■■□□□ 1.37
KDM2B-216ENST00000543025 RAPGEF6Q8TEU7 1601 aa23.61■■□□□ 1.37
KDM2B-216ENST00000543025 DDX10Q13206 875 aaKnown RBP23.61■■□□□ 1.37
KDM2B-216ENST00000543025 KCNH8Q96L42 1107 aa23.61■■□□□ 1.37
KDM2B-216ENST00000543025 ARHGEF11O15085 1522 aa23.6■■□□□ 1.37
KDM2B-216ENST00000543025 CCDC18Q5T9S5 1454 aa23.6■■□□□ 1.37
KDM2B-216ENST00000543025 PLB1Q6P1J6 1458 aa23.6■■□□□ 1.37
KDM2B-216ENST00000543025 LRRIQ1Q96JM4 1722 aa23.59■■□□□ 1.37
KDM2B-216ENST00000543025 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
KDM2B-216ENST00000543025 ABCA8O94911 1581 aa23.58■■□□□ 1.37
KDM2B-216ENST00000543025 HECW1Q76N89 1606 aa23.58■■□□□ 1.36
KDM2B-216ENST00000543025 UACAQ9BZF9 1416 aa23.56■■□□□ 1.36
KDM2B-216ENST00000543025 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
KDM2B-216ENST00000543025 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
KDM2B-216ENST00000543025 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
KDM2B-216ENST00000543025 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
KDM2B-216ENST00000543025 NCOA2Q15596 1464 aa23.54■■□□□ 1.36
KDM2B-216ENST00000543025 MYOM3Q5VTT5 1437 aa23.54■■□□□ 1.36
KDM2B-216ENST00000543025 PTPRKQ15262 1439 aa23.53■■□□□ 1.36
KDM2B-216ENST00000543025 TONSLQ96HA7 1378 aa23.53■■□□□ 1.36
KDM2B-216ENST00000543025 SUPT6HQ7KZ85 1726 aaKnown RBP23.53■■□□□ 1.36
KDM2B-216ENST00000543025 EHBP1L1Q8N3D4 1523 aa23.52■■□□□ 1.36
KDM2B-216ENST00000543025 NUP153P49790 1475 aaKnown RBP23.52■■□□□ 1.36
KDM2B-216ENST00000543025 NAIPQ13075 1403 aa23.48■■□□□ 1.35
KDM2B-216ENST00000543025 EPRSP07814 1512 aaKnown RBP23.47■■□□□ 1.35
KDM2B-216ENST00000543025 ABCC2Q92887 1545 aa23.47■■□□□ 1.35
KDM2B-216ENST00000543025 CDK13Q14004 1512 aaKnown RBP23.46■■□□□ 1.35
KDM2B-216ENST00000543025 CCER2I3L3R5 266 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms