RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ADAMTS12P58397 1594 aa18.27■□□□□ 0.52
CHFR-220ENST00000541817 HECW2Q9P2P5 1572 aa18.25■□□□□ 0.51
CHFR-220ENST00000541817 ADGRL1O94910 1474 aa18.24■□□□□ 0.51
CHFR-220ENST00000541817 JPH4Q96JJ6 628 aa18.22■□□□□ 0.51
CHFR-220ENST00000541817 MAPKBP1O60336 1514 aa18.21■□□□□ 0.51
CHFR-220ENST00000541817 ADCY10Q96PN6 1610 aa18.19■□□□□ 0.5
CHFR-220ENST00000541817 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
CHFR-220ENST00000541817 FBXO41Q8TF61 875 aa18.12■□□□□ 0.49
CHFR-220ENST00000541817 TTBK1Q5TCY1 1321 aaPredicted RBP18.07■□□□□ 0.48
CHFR-220ENST00000541817 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.481e-6■■■■■ 52.5
CHFR-220ENST00000541817 PPRC1Q5VV67 1664 aaKnown RBP18.04■□□□□ 0.48
CHFR-220ENST00000541817 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
CHFR-220ENST00000541817 COL17A1Q9UMD9 1497 aaPredicted RBP18.02■□□□□ 0.48
CHFR-220ENST00000541817 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
CHFR-220ENST00000541817 ASXL2Q76L83 1435 aa17.92■□□□□ 0.46
CHFR-220ENST00000541817 LMTK3Q96Q04 1460 aa17.92■□□□□ 0.46
CHFR-220ENST00000541817 BIVM-ERCC5R4GMW8 1640 aa17.89■□□□□ 0.45
CHFR-220ENST00000541817 TOP2BQ02880 1626 aa17.88■□□□□ 0.45
CHFR-220ENST00000541817 PTPRGP23470 1445 aa17.88■□□□□ 0.45
CHFR-220ENST00000541817 GLI2P10070 1586 aa17.87■□□□□ 0.45
CHFR-220ENST00000541817 CUL7Q14999 1698 aa17.87■□□□□ 0.45
CHFR-220ENST00000541817 ABCC2Q92887 1545 aa17.84■□□□□ 0.45
CHFR-220ENST00000541817 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
CHFR-220ENST00000541817 ILDR2Q71H61 639 aa17.84■□□□□ 0.45
CHFR-220ENST00000541817 KIAA0586Q9BVV6 1533 aa17.82■□□□□ 0.44
CHFR-220ENST00000541817 MAP3K4Q9Y6R4 1608 aa17.8■□□□□ 0.44
CHFR-220ENST00000541817 EPRSP07814 1512 aaKnown RBP17.79■□□□□ 0.44
CHFR-220ENST00000541817 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
CHFR-220ENST00000541817 TNIKQ9UKE5 1360 aa17.75■□□□□ 0.43
CHFR-220ENST00000541817 KIF21BO75037 1637 aa17.74■□□□□ 0.43
CHFR-220ENST00000541817 SOCS7O14512 581 aa17.74■□□□□ 0.43
CHFR-220ENST00000541817 DISP3Q9P2K9 1392 aa17.71■□□□□ 0.43
CHFR-220ENST00000541817 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
CHFR-220ENST00000541817 CARMIL2Q6F5E8 1435 aa17.68■□□□□ 0.42
CHFR-220ENST00000541817 UHRF1BP1LA0JNW5 1464 aa17.68■□□□□ 0.42
CHFR-220ENST00000541817 ZCCHC11Q5TAX3 1644 aaKnown RBP17.67■□□□□ 0.42
CHFR-220ENST00000541817 IGF1RP08069 1367 aa17.66■□□□□ 0.42
CHFR-220ENST00000541817 PTPRMP28827 1452 aa17.65■□□□□ 0.42
CHFR-220ENST00000541817 KDM5BQ9UGL1 1544 aa17.63■□□□□ 0.41
CHFR-220ENST00000541817 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
CHFR-220ENST00000541817 KCNH8Q96L42 1107 aa17.62■□□□□ 0.41
CHFR-220ENST00000541817 HSPA2P54652 639 aa17.6■□□□□ 0.41
CHFR-220ENST00000541817 CD109Q6YHK3 1445 aa17.59■□□□□ 0.41
CHFR-220ENST00000541817 CERKQ8TCT0 537 aa17.59■□□□□ 0.41
CHFR-220ENST00000541817 PCF11O94913 1555 aaKnown RBP17.58■□□□□ 0.41
CHFR-220ENST00000541817 ADAMTSL3P82987 1691 aa17.58■□□□□ 0.4
CHFR-220ENST00000541817 DISP1Q96F81 1524 aa17.57■□□□□ 0.4
CHFR-220ENST00000541817 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
CHFR-220ENST00000541817 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
CHFR-220ENST00000541817 IQGAP2Q13576 1575 aa17.56■□□□□ 0.4
CHFR-220ENST00000541817 CARMIL1Q5VZK9 1371 aa17.53■□□□□ 0.4
CHFR-220ENST00000541817 MAGI3Q5TCQ9 1506 aa17.53■□□□□ 0.4
CHFR-220ENST00000541817 KIF27Q86VH2 1401 aa17.52■□□□□ 0.4
CHFR-220ENST00000541817 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.39
CHFR-220ENST00000541817 MADDQ8WXG6 1647 aa17.51■□□□□ 0.39
CHFR-220ENST00000541817 ARID4BQ4LE39 1312 aaPredicted RBP17.49■□□□□ 0.39
CHFR-220ENST00000541817 BCORL1Q5H9F3 1711 aa17.47■□□□□ 0.39
CHFR-220ENST00000541817 RAPGEF3O95398 923 aa17.45■□□□□ 0.38
CHFR-220ENST00000541817 RIMS1Q86UR5 1692 aaKnown RBP17.45■□□□□ 0.38
CHFR-220ENST00000541817 SPATA31D1Q6ZQQ2 1576 aa17.44■□□□□ 0.38
CHFR-220ENST00000541817 KIAA0556O60303 1618 aa17.43■□□□□ 0.38
CHFR-220ENST00000541817 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
CHFR-220ENST00000541817 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
CHFR-220ENST00000541817 UGGT2Q9NYU1 1516 aa17.39■□□□□ 0.37
CHFR-220ENST00000541817 ABCA8O94911 1581 aa17.32■□□□□ 0.36
CHFR-220ENST00000541817 FRMPD1Q5SYB0 1578 aa17.3■□□□□ 0.36
CHFR-220ENST00000541817 MLECQ14165 292 aa17.28■□□□□ 0.36
CHFR-220ENST00000541817 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
CHFR-220ENST00000541817 SIGLEC1Q9BZZ2 1709 aa17.24■□□□□ 0.35
CHFR-220ENST00000541817 ABCA9Q8IUA7 1624 aa17.23■□□□□ 0.35
CHFR-220ENST00000541817 PHLDB1Q86UU1 1377 aa17.23■□□□□ 0.35
CHFR-220ENST00000541817 ATP10BO94823 1461 aa17.21■□□□□ 0.35
CHFR-220ENST00000541817 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.34
CHFR-220ENST00000541817 STRCQ7RTU9 1775 aa17.2■□□□□ 0.34
CHFR-220ENST00000541817 CEBPAP49715 358 aaPredicted RBP17.2■□□□□ 0.34
CHFR-220ENST00000541817 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
CHFR-220ENST00000541817 NEO1Q92859 1461 aa17.19■□□□□ 0.34
CHFR-220ENST00000541817 YEATS2Q9ULM3 1422 aa17.17■□□□□ 0.34
CHFR-220ENST00000541817 CTTNBP2Q8WZ74 1663 aa17.16■□□□□ 0.34
CHFR-220ENST00000541817 FER1L4A9Z1Z3 1794 aa17.16■□□□□ 0.34
CHFR-220ENST00000541817 POGZQ7Z3K3 1410 aa17.15■□□□□ 0.34
CHFR-220ENST00000541817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
CHFR-220ENST00000541817 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
CHFR-220ENST00000541817 FANCAO15360 1455 aa17.15■□□□□ 0.34
CHFR-220ENST00000541817 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
CHFR-220ENST00000541817 RICTORQ6R327 1708 aa17.15■□□□□ 0.34
CHFR-220ENST00000541817 DENND4BO75064 1496 aaPredicted RBP17.13■□□□□ 0.33
CHFR-220ENST00000541817 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
CHFR-220ENST00000541817 PREX1Q8TCU6 1659 aa17.13■□□□□ 0.33
CHFR-220ENST00000541817 AKNAQ7Z591 1439 aa17.12■□□□□ 0.33
CHFR-220ENST00000541817 TTC37Q6PGP7 1564 aa17.11■□□□□ 0.33
CHFR-220ENST00000541817 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.32
CHFR-220ENST00000541817 LTBP4Q8N2S1 1624 aa17.07■□□□□ 0.32
CHFR-220ENST00000541817 FHOD3Q2V2M9 1422 aa17.06■□□□□ 0.32
CHFR-220ENST00000541817 UHRF1BP1Q6BDS2 1440 aa17.03■□□□□ 0.32
CHFR-220ENST00000541817 EFCAB5A4FU69 1503 aa17.02■□□□□ 0.32
CHFR-220ENST00000541817 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.32
CHFR-220ENST00000541817 HECW1Q76N89 1606 aa17.02■□□□□ 0.31
CHFR-220ENST00000541817 PTPRTO14522 1441 aa17.02■□□□□ 0.31
CHFR-220ENST00000541817 UBAP1LF5GYI3 381 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms