RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PRXQ9BXM0 1461 aa32.48■■■□□ 2.79
DDX55-207ENST00000540763 ARAP1Q96P48 1450 aa32.45■■■□□ 2.79
DDX55-207ENST00000540763 SHROOM2Q13796 1616 aa32.41■■■□□ 2.78
DDX55-207ENST00000540763 CSRNP3Q8WYN3 585 aa32.4■■■□□ 2.78
DDX55-207ENST00000540763 KIAA0586Q9BVV6 1533 aa32.36■■■□□ 2.77
DDX55-207ENST00000540763 CTTNBP2Q8WZ74 1663 aa32.32■■■□□ 2.76
DDX55-207ENST00000540763 KIF21BO75037 1637 aa32.32■■■□□ 2.76
DDX55-207ENST00000540763 IQGAP2Q13576 1575 aa32.26■■■□□ 2.75
DDX55-207ENST00000540763 TRHP20396 242 aaPredicted RBP32.21■■■□□ 2.75
DDX55-207ENST00000540763 FAM9AQ8IZU1 332 aaPredicted RBP32.21■■■□□ 2.75
DDX55-207ENST00000540763 JPH4Q96JJ6 628 aa32.16■■■□□ 2.74
DDX55-207ENST00000540763 ERCC6L2Q5T890 1561 aa32.12■■■□□ 2.73
DDX55-207ENST00000540763 PRG4Q92954 1404 aaPredicted RBP32.11■■■□□ 2.73
DDX55-207ENST00000540763 UGGT2Q9NYU1 1516 aa32.1■■■□□ 2.73
DDX55-207ENST00000540763 GOLGA3Q08378 1498 aa32.07■■■□□ 2.72
DDX55-207ENST00000540763 CARMIL2Q6F5E8 1435 aa32■■■□□ 2.71
DDX55-207ENST00000540763 DISP1Q96F81 1524 aa31.96■■■□□ 2.71
DDX55-207ENST00000540763 KIAA0556O60303 1618 aa31.96■■■□□ 2.71
DDX55-207ENST00000540763 SAMD9Q5K651 1589 aa31.87■■■□□ 2.69
DDX55-207ENST00000540763 TNIKQ9UKE5 1360 aa31.85■■■□□ 2.69
DDX55-207ENST00000540763 UBTFP17480 764 aaKnown RBP31.79■■■□□ 2.68
DDX55-207ENST00000540763 EFCAB5A4FU69 1503 aa31.79■■■□□ 2.68
DDX55-207ENST00000540763 PTPRGP23470 1445 aa31.76■■■□□ 2.68
DDX55-207ENST00000540763 ADCY10Q96PN6 1610 aa31.68■■■□□ 2.66
DDX55-207ENST00000540763 EHMT2Q96KQ7 1210 aa31.68■■■□□ 2.66
DDX55-207ENST00000540763 UHRF1BP1LA0JNW5 1464 aa31.64■■■□□ 2.66
DDX55-207ENST00000540763 ABCC2Q92887 1545 aa31.6■■■□□ 2.65
DDX55-207ENST00000540763 UACAQ9BZF9 1416 aa31.6■■■□□ 2.65
DDX55-207ENST00000540763 ABCA8O94911 1581 aa31.58■■■□□ 2.65
DDX55-207ENST00000540763 ARHGAP35Q9NRY4 1499 aa31.56■■■□□ 2.64
DDX55-207ENST00000540763 FHOD3Q2V2M9 1422 aa31.53■■■□□ 2.64
DDX55-207ENST00000540763 TTBK1Q5TCY1 1321 aaPredicted RBP31.51■■■□□ 2.64
DDX55-207ENST00000540763 RANGAP1P46060 587 aaPredicted RBP31.51■■■□□ 2.63
DDX55-207ENST00000540763 PLB1Q6P1J6 1458 aa31.51■■■□□ 2.63
DDX55-207ENST00000540763 P3H3Q8IVL6 736 aa31.5■■■□□ 2.63
DDX55-207ENST00000540763 RAPGEF6Q8TEU7 1601 aa31.48■■■□□ 2.63
DDX55-207ENST00000540763 MAPKBP1O60336 1514 aa31.48■■■□□ 2.63
DDX55-207ENST00000540763 KDM5BQ9UGL1 1544 aa31.46■■■□□ 2.63
DDX55-207ENST00000540763 CLIP1P30622 1438 aa31.44■■■□□ 2.62
DDX55-207ENST00000540763 ZCCHC11Q5TAX3 1644 aaKnown RBP31.42■■■□□ 2.62
DDX55-207ENST00000540763 FMN1Q68DA7 1419 aa31.42■■■□□ 2.62
DDX55-207ENST00000540763 NPM1P06748 294 aaKnown RBP eCLIP31.42■■■□□ 2.62
DDX55-207ENST00000540763 KIF13AQ9H1H9 1805 aa31.39■■■□□ 2.62
DDX55-207ENST00000540763 CEP162Q5TB80 1403 aa31.38■■■□□ 2.61
DDX55-207ENST00000540763 LOC105371045A0A1W2PR82 267 aa31.36■■■□□ 2.61
DDX55-207ENST00000540763 AEBP2Q6ZN18 517 aaPredicted RBP31.36■■■□□ 2.61
DDX55-207ENST00000540763 NUP153P49790 1475 aaKnown RBP31.3■■■□□ 2.6
DDX55-207ENST00000540763 HECW1Q76N89 1606 aa31.3■■■□□ 2.6
DDX55-207ENST00000540763 ASXL2Q76L83 1435 aa31.24■■■□□ 2.59
DDX55-207ENST00000540763 ATP10BO94823 1461 aa31.24■■■□□ 2.59
DDX55-207ENST00000540763 DIP2BQ9P265 1576 aa31.23■■■□□ 2.59
DDX55-207ENST00000540763 ABCC10Q5T3U5 1492 aa31.22■■■□□ 2.59
DDX55-207ENST00000540763 PCF11O94913 1555 aaKnown RBP31.22■■■□□ 2.59
DDX55-207ENST00000540763 CASKIN1Q8WXD9 1431 aa31.19■■■□□ 2.58
DDX55-207ENST00000540763 FYCO1Q9BQS8 1478 aa31.18■■■□□ 2.58
DDX55-207ENST00000540763 WDR7Q9Y4E6 1490 aa31.18■■■□□ 2.58
DDX55-207ENST00000540763 LRRIQ1Q96JM4 1722 aa31.15■■■□□ 2.58
DDX55-207ENST00000540763 FAM69CQ0P6D2 419 aa31.15■■■□□ 2.58
DDX55-207ENST00000540763 GLI2P10070 1586 aa31.14■■■□□ 2.58
DDX55-207ENST00000540763 EPRSP07814 1512 aaKnown RBP31.14■■■□□ 2.57
DDX55-207ENST00000540763 CCDC18Q5T9S5 1454 aa31.09■■■□□ 2.57
DDX55-207ENST00000540763 CDK13Q14004 1512 aaKnown RBP31.08■■■□□ 2.57
DDX55-207ENST00000540763 ARID3CA6NKF2 412 aa31.03■■■□□ 2.56
DDX55-207ENST00000540763 VPS8Q8N3P4 1428 aa31.02■■■□□ 2.56
DDX55-207ENST00000540763 MAP3K4Q9Y6R4 1608 aa31.02■■■□□ 2.56
DDX55-207ENST00000540763 CFAP43Q8NDM7 1665 aa31■■■□□ 2.55
DDX55-207ENST00000540763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.99■■■□□ 2.55
DDX55-207ENST00000540763 HNRNPUL2Q1KMD3 747 aaKnown RBP30.99■■■□□ 2.55
DDX55-207ENST00000540763 ATP1B4Q9UN42 357 aaPredicted RBP30.97■■■□□ 2.55
DDX55-207ENST00000540763 TSPOAP1O95153 1857 aa30.95■■■□□ 2.55
DDX55-207ENST00000540763 ABCA9Q8IUA7 1624 aa30.95■■■□□ 2.55
DDX55-207ENST00000540763 PLEKHD1A6NEE1 506 aa30.94■■■□□ 2.54
DDX55-207ENST00000540763 CDK11AQ9UQ88 783 aaPredicted RBP30.93■■■□□ 2.54
DDX55-207ENST00000540763 KDM6BO15054 1643 aa30.92■■■□□ 2.54
DDX55-207ENST00000540763 PPRC1Q5VV67 1664 aaKnown RBP30.91■■■□□ 2.54
DDX55-207ENST00000540763 TROQ12816 1431 aaPredicted RBP30.88■■■□□ 2.53
DDX55-207ENST00000540763 KIF14Q15058 1648 aa30.86■■■□□ 2.53
DDX55-207ENST00000540763 KCNH8Q96L42 1107 aa30.85■■■□□ 2.53
DDX55-207ENST00000540763 MAGI3Q5TCQ9 1506 aa30.83■■■□□ 2.53
DDX55-207ENST00000540763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.82■■■□□ 2.52
DDX55-207ENST00000540763 MAP3K1Q13233 1512 aa30.81■■■□□ 2.52
DDX55-207ENST00000540763 TEX14Q8IWB6 1497 aa30.81■■■□□ 2.52
DDX55-207ENST00000540763 CD109Q6YHK3 1445 aa30.81■■■□□ 2.52
DDX55-207ENST00000540763 TIAM1Q13009 1591 aa30.8■■■□□ 2.52
DDX55-207ENST00000540763 TTC37Q6PGP7 1564 aa30.79■■■□□ 2.52
DDX55-207ENST00000540763 EHBP1L1Q8N3D4 1523 aa30.76■■■□□ 2.51
DDX55-207ENST00000540763 MYO5CQ9NQX4 1742 aa30.74■■■□□ 2.51
DDX55-207ENST00000540763 MTUS2Q5JR59 1369 aa30.69■■■□□ 2.5
DDX55-207ENST00000540763 ARAP3Q8WWN8 1544 aa30.69■■■□□ 2.5
DDX55-207ENST00000540763 CFAP74Q9C0B2 1584 aa30.69■■■□□ 2.5
DDX55-207ENST00000540763 NEO1Q92859 1461 aa30.63■■■□□ 2.49
DDX55-207ENST00000540763 PREX2Q70Z35 1606 aa30.63■■■□□ 2.49
DDX55-207ENST00000540763 SUPT6HQ7KZ85 1726 aaKnown RBP30.63■■■□□ 2.49
DDX55-207ENST00000540763 PHLDB1Q86UU1 1377 aa30.62■■■□□ 2.49
DDX55-207ENST00000540763 LRRC9Q6ZRR7 1453 aa30.62■■■□□ 2.49
DDX55-207ENST00000540763 CDC42BPAQ5VT25 1732 aa30.61■■■□□ 2.49
DDX55-207ENST00000540763 PLCH2O75038 1416 aa30.61■■■□□ 2.49
DDX55-207ENST00000540763 KDM4FA0A1W2PPD8 638 aa30.6■■■□□ 2.49
DDX55-207ENST00000540763 CDC42BPBQ9Y5S2 1711 aa30.59■■■□□ 2.49
DDX55-207ENST00000540763 FANCAO15360 1455 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms