RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 NISCHQ9Y2I1 1504 aa46.88■■■■■ 5.09
DDX55-207ENST00000540763 CCDC180Q9P1Z9 1646 aa41.72■■■■■ 4.27
DDX55-207ENST00000540763 ABCC9O60706 1549 aa40.46■■■■■ 4.07
DDX55-207ENST00000540763 ZCCHC6Q5VYS8 1495 aaKnown RBP39.15■■■■□ 3.86
DDX55-207ENST00000540763 NACADO15069 1562 aa39.06■■■■□ 3.84
DDX55-207ENST00000540763 RB1CC1Q8TDY2 1594 aa39.02■■■■□ 3.84
DDX55-207ENST00000540763 MYO15BQ96JP2 1530 aa39■■■■□ 3.83
DDX55-207ENST00000540763 DCAF1Q9Y4B6 1507 aa38.92■■■■□ 3.82
DDX55-207ENST00000540763 DCAF8L2P0C7V8 631 aa38.74■■■■□ 3.79
DDX55-207ENST00000540763 UNC13AQ9UPW8 1703 aa38.21■■■■□ 3.71
DDX55-207ENST00000540763 DNAJC5BQ9UF47 199 aa37.98■■■■□ 3.67
DDX55-207ENST00000540763 SCRIBQ14160 1630 aa37.9■■■■□ 3.66
DDX55-207ENST00000540763 BICRAQ9NZM4 1560 aa37.79■■■■□ 3.64
DDX55-207ENST00000540763 PABPN1Q86U42 306 aaKnown RBP eCLIP37.61■■■■□ 3.61
DDX55-207ENST00000540763 SHROOM4Q9ULL8 1493 aa37.57■■■■□ 3.6
DDX55-207ENST00000540763 EIF4G1Q04637 1599 aaKnown RBP36.77■■■■□ 3.48
DDX55-207ENST00000540763 CC2D2AQ9P2K1 1620 aa36.56■■■■□ 3.44
DDX55-207ENST00000540763 CECR2Q9BXF3 1484 aa36.47■■■■□ 3.43
DDX55-207ENST00000540763 BAZ1AQ9NRL2 1556 aaPredicted RBP36.36■■■■□ 3.41
DDX55-207ENST00000540763 SMARCA4P51532 1647 aa36.35■■■■□ 3.41
DDX55-207ENST00000540763 MROH2BQ7Z745 1585 aa36.08■■■■□ 3.37
DDX55-207ENST00000540763 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
DDX55-207ENST00000540763 PEG3Q9GZU2 1588 aa36.06■■■■□ 3.36
DDX55-207ENST00000540763 ATAD2BQ9ULI0 1458 aa36■■■■□ 3.35
DDX55-207ENST00000540763 NCAPD3P42695 1498 aa35.98■■■■□ 3.35
DDX55-207ENST00000540763 HMGXB3Q12766 1538 aa35.91■■■■□ 3.34
DDX55-207ENST00000540763 RSF1Q96T23 1441 aaPredicted RBP35.76■■■■□ 3.32
DDX55-207ENST00000540763 WIZO95785 1651 aa35.75■■■■□ 3.31
DDX55-207ENST00000540763 BAZ1BQ9UIG0 1483 aaKnown RBP35.74■■■■□ 3.31
DDX55-207ENST00000540763 TOP2AP11388 1531 aaKnown RBP35.43■■■■□ 3.26
DDX55-207ENST00000540763 LAMC3Q9Y6N6 1575 aa35.05■■■■□ 3.2
DDX55-207ENST00000540763 DNAJC5Q9H3Z4 198 aa35■■■■□ 3.19
DDX55-207ENST00000540763 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
DDX55-207ENST00000540763 CUX2O14529 1486 aa34.95■■■■□ 3.19
DDX55-207ENST00000540763 NESP48681 1621 aa34.92■■■■□ 3.18
DDX55-207ENST00000540763 CCDC88BA6NC98 1476 aa34.91■■■■□ 3.18
DDX55-207ENST00000540763 SUPT5HO00267 1087 aaKnown RBP34.9■■■■□ 3.18
DDX55-207ENST00000540763 CADPSQ9ULU8 1353 aa34.89■■■■□ 3.18
DDX55-207ENST00000540763 CFTRP13569 1480 aa34.79■■■■□ 3.16
DDX55-207ENST00000540763 PRDM2Q13029 1718 aa34.77■■■■□ 3.16
DDX55-207ENST00000540763 PDS5BQ9NTI5 1447 aa34.72■■■■□ 3.15
DDX55-207ENST00000540763 KIF21AQ7Z4S6 1674 aa34.66■■■■□ 3.14
DDX55-207ENST00000540763 FANCD2Q9BXW9 1451 aa34.5■■■■□ 3.11
DDX55-207ENST00000540763 THOC2Q8NI27 1593 aaKnown RBP34.49■■■■□ 3.11
DDX55-207ENST00000540763 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
DDX55-207ENST00000540763 MRC2Q9UBG0 1479 aa34.35■■■■□ 3.09
DDX55-207ENST00000540763 WDR62O43379 1518 aa34.28■■■■□ 3.08
DDX55-207ENST00000540763 URB2Q14146 1524 aaKnown RBP34.14■■■■□ 3.06
DDX55-207ENST00000540763 ABCC8Q09428 1581 aa34.1■■■■□ 3.05
DDX55-207ENST00000540763 DNMBPQ6XZF7 1577 aa34.05■■■■□ 3.04
DDX55-207ENST00000540763 TOPBP1Q92547 1522 aa34.01■■■■□ 3.04
DDX55-207ENST00000540763 CUX1P39880 1505 aa33.85■■■■□ 3.01
DDX55-207ENST00000540763 BIVM-ERCC5R4GMW8 1640 aa33.75■■■□□ 2.99
DDX55-207ENST00000540763 IFT140Q96RY7 1462 aa33.74■■■□□ 2.99
DDX55-207ENST00000540763 WRNQ14191 1432 aaPredicted RBP eCLIP33.73■■■□□ 2.99
DDX55-207ENST00000540763 POLA1P09884 1462 aaPredicted RBP33.73■■■□□ 2.99
DDX55-207ENST00000540763 TOP2BQ02880 1626 aa33.71■■■□□ 2.99
DDX55-207ENST00000540763 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
DDX55-207ENST00000540763 SYNJ1O43426 1573 aa33.66■■■□□ 2.98
DDX55-207ENST00000540763 TARBP1Q13395 1621 aaKnown RBP33.66■■■□□ 2.98
DDX55-207ENST00000540763 SOGA1O94964 1423 aa33.54■■■□□ 2.96
DDX55-207ENST00000540763 WDR97A6NE52 1622 aa33.54■■■□□ 2.96
DDX55-207ENST00000540763 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
DDX55-207ENST00000540763 EIF4G3O43432 1585 aaKnown RBP33.48■■■□□ 2.95
DDX55-207ENST00000540763 ZNF608Q9ULD9 1512 aaPredicted RBP33.48■■■□□ 2.95
DDX55-207ENST00000540763 ABCA10Q8WWZ4 1543 aa33.43■■■□□ 2.94
DDX55-207ENST00000540763 TRIM41Q8WV44 630 aa33.42■■■□□ 2.94
DDX55-207ENST00000540763 ABCA5Q8WWZ7 1642 aa33.31■■■□□ 2.92
DDX55-207ENST00000540763 OSCARQ8IYS5 282 aa33.3■■■□□ 2.92
DDX55-207ENST00000540763 AQRO60306 1485 aaKnown RBP eCLIP33.3■■■□□ 2.921e-6■■■■■ 42.9
DDX55-207ENST00000540763 TDRD9Q8NDG6 1382 aaKnown RBP33.26■■■□□ 2.92
DDX55-207ENST00000540763 PBRM1Q86U86 1689 aa33.24■■■□□ 2.91
DDX55-207ENST00000540763 GAPVD1Q14C86 1478 aa33.2■■■□□ 2.91
DDX55-207ENST00000540763 GRIN2BQ13224 1484 aa33.18■■■□□ 2.9
DDX55-207ENST00000540763 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
DDX55-207ENST00000540763 ERICH3Q5RHP9 1530 aa33.07■■■□□ 2.88
DDX55-207ENST00000540763 SNAPC4Q5SXM2 1469 aa33.06■■■□□ 2.88
DDX55-207ENST00000540763 CHD1O14646 1710 aa33.02■■■□□ 2.88
DDX55-207ENST00000540763 KIF27Q86VH2 1401 aa33.01■■■□□ 2.87
DDX55-207ENST00000540763 ADAMTS12P58397 1594 aa32.96■■■□□ 2.87
DDX55-207ENST00000540763 SYNJ2O15056 1496 aa32.94■■■□□ 2.86
DDX55-207ENST00000540763 RIMBP3CA6NJZ7 1639 aa32.91■■■□□ 2.86
DDX55-207ENST00000540763 RIMBP3BA6NNM3 1639 aa32.91■■■□□ 2.86
DDX55-207ENST00000540763 RIMBP3Q9UFD9 1639 aa32.91■■■□□ 2.86
DDX55-207ENST00000540763 CUL7Q14999 1698 aa32.88■■■□□ 2.85
DDX55-207ENST00000540763 FHAD1B1AJZ9 1412 aa32.85■■■□□ 2.85
DDX55-207ENST00000540763 CHIC1Q5VXU3 224 aa32.81■■■□□ 2.84
DDX55-207ENST00000540763 ARHGEF11O15085 1522 aa32.79■■■□□ 2.84
DDX55-207ENST00000540763 CHMP7Q8WUX9 453 aaPredicted RBP32.78■■■□□ 2.84
DDX55-207ENST00000540763 IGF1RP08069 1367 aa32.78■■■□□ 2.84
DDX55-207ENST00000540763 GRIN2AQ12879 1464 aa32.76■■■□□ 2.84
DDX55-207ENST00000540763 FBLN2P98095 1184 aa32.74■■■□□ 2.83
DDX55-207ENST00000540763 RUSC2Q8N2Y8 1516 aa32.71■■■□□ 2.83
DDX55-207ENST00000540763 EEA1Q15075 1411 aa32.66■■■□□ 2.82
DDX55-207ENST00000540763 CLASP1Q7Z460 1538 aa32.65■■■□□ 2.82
DDX55-207ENST00000540763 NUP160Q12769 1436 aa32.61■■■□□ 2.81
DDX55-207ENST00000540763 CARMIL1Q5VZK9 1371 aa32.6■■■□□ 2.81
DDX55-207ENST00000540763 CEP170Q5SW79 1584 aa32.59■■■□□ 2.81
DDX55-207ENST00000540763 CYB5RLQ6IPT4 315 aa32.51■■■□□ 2.79
DDX55-207ENST00000540763 RAPGEF2Q9Y4G8 1499 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms