RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 RAPGEF2Q9Y4G8 1499 aa28.67■■■□□ 2.18
COPS7A-210ENST00000539735 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
COPS7A-210ENST00000539735 CLASP1Q7Z460 1538 aa28.66■■■□□ 2.18
COPS7A-210ENST00000539735 TNIKQ9UKE5 1360 aa28.64■■■□□ 2.18
COPS7A-210ENST00000539735 UBTFP17480 764 aaKnown RBP28.64■■■□□ 2.17
COPS7A-210ENST00000539735 KIF21BO75037 1637 aa28.62■■■□□ 2.17
COPS7A-210ENST00000539735 PRXQ9BXM0 1461 aa28.62■■■□□ 2.17
COPS7A-210ENST00000539735 CEP162Q5TB80 1403 aa28.55■■■□□ 2.16
COPS7A-210ENST00000539735 JPH4Q96JJ6 628 aa28.53■■■□□ 2.16
COPS7A-210ENST00000539735 ARHGEF11O15085 1522 aa28.53■■■□□ 2.16
COPS7A-210ENST00000539735 KIAA0586Q9BVV6 1533 aa28.53■■■□□ 2.16
COPS7A-210ENST00000539735 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
COPS7A-210ENST00000539735 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
COPS7A-210ENST00000539735 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
COPS7A-210ENST00000539735 PRG4Q92954 1404 aaPredicted RBP28.42■■■□□ 2.14
COPS7A-210ENST00000539735 CYB5RLQ6IPT4 315 aa28.39■■■□□ 2.14
COPS7A-210ENST00000539735 SHROOM2Q13796 1616 aa28.37■■■□□ 2.13
COPS7A-210ENST00000539735 IQGAP2Q13576 1575 aa28.36■■■□□ 2.13
COPS7A-210ENST00000539735 PPARGC1BQ86YN6 1023 aaKnown RBP28.34■■■□□ 2.13
COPS7A-210ENST00000539735 ERCC6L2Q5T890 1561 aa28.33■■■□□ 2.13
COPS7A-210ENST00000539735 ZEB1P37275 1124 aaPredicted RBP28.33■■■□□ 2.13
COPS7A-210ENST00000539735 ARAP1Q96P48 1450 aa28.31■■■□□ 2.12
COPS7A-210ENST00000539735 CLIP1P30622 1438 aa28.25■■■□□ 2.11
COPS7A-210ENST00000539735 CARMIL2Q6F5E8 1435 aa28.25■■■□□ 2.11
COPS7A-210ENST00000539735 RANGAP1P46060 587 aaPredicted RBP28.24■■■□□ 2.11
COPS7A-210ENST00000539735 CTTNBP2Q8WZ74 1663 aa28.24■■■□□ 2.11
COPS7A-210ENST00000539735 TTBK1Q5TCY1 1321 aaPredicted RBP28.22■■■□□ 2.11
COPS7A-210ENST00000539735 UGGT2Q9NYU1 1516 aa28.21■■■□□ 2.11
COPS7A-210ENST00000539735 DISP1Q96F81 1524 aa28.17■■■□□ 2.1
COPS7A-210ENST00000539735 PTPRGP23470 1445 aa28.13■■■□□ 2.09
COPS7A-210ENST00000539735 P3H3Q8IVL6 736 aa28.11■■■□□ 2.09
COPS7A-210ENST00000539735 KIAA0556O60303 1618 aa28.07■■■□□ 2.08
COPS7A-210ENST00000539735 VPS8Q8N3P4 1428 aa28.03■■■□□ 2.08
COPS7A-210ENST00000539735 SAMD9Q5K651 1589 aa27.94■■■□□ 2.06
COPS7A-210ENST00000539735 FHOD3Q2V2M9 1422 aa27.92■■■□□ 2.06
COPS7A-210ENST00000539735 NPM1P06748 294 aaKnown RBP eCLIP27.91■■■□□ 2.06
COPS7A-210ENST00000539735 UACAQ9BZF9 1416 aa27.91■■■□□ 2.06
COPS7A-210ENST00000539735 EFCAB5A4FU69 1503 aa27.9■■■□□ 2.06
COPS7A-210ENST00000539735 PLB1Q6P1J6 1458 aa27.86■■■□□ 2.05
COPS7A-210ENST00000539735 ARHGAP35Q9NRY4 1499 aa27.86■■■□□ 2.05
COPS7A-210ENST00000539735 ADCY10Q96PN6 1610 aa27.85■■■□□ 2.05
COPS7A-210ENST00000539735 APLP2Q06481 763 aa27.82■■■□□ 2.04
COPS7A-210ENST00000539735 UHRF1BP1LA0JNW5 1464 aa27.81■■■□□ 2.04
COPS7A-210ENST00000539735 ABCC2Q92887 1545 aa27.8■■■□□ 2.04
COPS7A-210ENST00000539735 TRHP20396 242 aaPredicted RBP27.76■■■□□ 2.03
COPS7A-210ENST00000539735 ARID3CA6NKF2 412 aa27.75■■■□□ 2.03
COPS7A-210ENST00000539735 ABCA8O94911 1581 aa27.75■■■□□ 2.03
COPS7A-210ENST00000539735 FMN1Q68DA7 1419 aa27.72■■■□□ 2.03
COPS7A-210ENST00000539735 ATP1B4Q9UN42 357 aaPredicted RBP27.7■■■□□ 2.02
COPS7A-210ENST00000539735 KDM5BQ9UGL1 1544 aa27.69■■■□□ 2.02
COPS7A-210ENST00000539735 CCER1Q8TC90 406 aaPredicted RBP27.67■■■□□ 2.02
COPS7A-210ENST00000539735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.66■■■□□ 2.02
COPS7A-210ENST00000539735 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
COPS7A-210ENST00000539735 RAPGEF6Q8TEU7 1601 aa27.65■■■□□ 2.02
COPS7A-210ENST00000539735 MAPKBP1O60336 1514 aa27.63■■■□□ 2.01
COPS7A-210ENST00000539735 NUP153P49790 1475 aaKnown RBP27.61■■■□□ 2.01
COPS7A-210ENST00000539735 ASXL2Q76L83 1435 aa27.61■■■□□ 2.01
COPS7A-210ENST00000539735 ATP10BO94823 1461 aa27.59■■■□□ 2.01
COPS7A-210ENST00000539735 ZCCHC11Q5TAX3 1644 aaKnown RBP27.58■■■□□ 2.01
COPS7A-210ENST00000539735 FAM69CQ0P6D2 419 aa27.56■■■□□ 2
COPS7A-210ENST00000539735 KANK4Q5T7N3 995 aaPredicted RBP27.53■■■□□ 2
COPS7A-210ENST00000539735 ABCC10Q5T3U5 1492 aa27.51■■■□□ 2
COPS7A-210ENST00000539735 CASKIN1Q8WXD9 1431 aa27.51■■□□□ 1.99
COPS7A-210ENST00000539735 KCNH8Q96L42 1107 aa27.51■■□□□ 1.99
COPS7A-210ENST00000539735 WDR7Q9Y4E6 1490 aa27.48■■□□□ 1.99
COPS7A-210ENST00000539735 HECW1Q76N89 1606 aa27.48■■□□□ 1.99
COPS7A-210ENST00000539735 PLEKHD1A6NEE1 506 aa27.47■■□□□ 1.99
COPS7A-210ENST00000539735 EPRSP07814 1512 aaKnown RBP27.46■■□□□ 1.99
COPS7A-210ENST00000539735 CDK13Q14004 1512 aaKnown RBP27.45■■□□□ 1.99
COPS7A-210ENST00000539735 PCF11O94913 1555 aaKnown RBP27.45■■□□□ 1.99
COPS7A-210ENST00000539735 FYCO1Q9BQS8 1478 aa27.44■■□□□ 1.98
COPS7A-210ENST00000539735 CDK11AQ9UQ88 783 aaPredicted RBP27.42■■□□□ 1.98
COPS7A-210ENST00000539735 DIP2BQ9P265 1576 aa27.42■■□□□ 1.98
COPS7A-210ENST00000539735 TIAM1Q13009 1591 aa27.41■■□□□ 1.98
COPS7A-210ENST00000539735 MAP3K1Q13233 1512 aa27.41■■□□□ 1.98
COPS7A-210ENST00000539735 CCDC18Q5T9S5 1454 aa27.36■■□□□ 1.97
COPS7A-210ENST00000539735 KIF13AQ9H1H9 1805 aa27.34■■□□□ 1.97
COPS7A-210ENST00000539735 CFAP43Q8NDM7 1665 aa27.31■■□□□ 1.96
COPS7A-210ENST00000539735 GLI2P10070 1586 aa27.31■■□□□ 1.96
COPS7A-210ENST00000539735 LRRC9Q6ZRR7 1453 aa27.3■■□□□ 1.96
COPS7A-210ENST00000539735 LRRIQ1Q96JM4 1722 aa27.26■■□□□ 1.96
COPS7A-210ENST00000539735 CD109Q6YHK3 1445 aa27.25■■□□□ 1.95
COPS7A-210ENST00000539735 TROQ12816 1431 aaPredicted RBP27.24■■□□□ 1.95
COPS7A-210ENST00000539735 RRBP1Q9P2E9 1410 aaKnown RBP27.22■■□□□ 1.95
COPS7A-210ENST00000539735 MTUS2Q5JR59 1369 aa27.19■■□□□ 1.94
COPS7A-210ENST00000539735 MAP3K4Q9Y6R4 1608 aa27.18■■□□□ 1.94
COPS7A-210ENST00000539735 TSPOAP1O95153 1857 aa27.17■■□□□ 1.94
COPS7A-210ENST00000539735 MAGI3Q5TCQ9 1506 aa27.17■■□□□ 1.94
COPS7A-210ENST00000539735 CCNB3Q8WWL7 1395 aa27.15■■□□□ 1.94
COPS7A-210ENST00000539735 ABCA9Q8IUA7 1624 aa27.14■■□□□ 1.94
COPS7A-210ENST00000539735 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.14■■□□□ 1.93
COPS7A-210ENST00000539735 TEX14Q8IWB6 1497 aa27.12■■□□□ 1.93
COPS7A-210ENST00000539735 KIF14Q15058 1648 aa27.11■■□□□ 1.93
COPS7A-210ENST00000539735 PHLDB1Q86UU1 1377 aa27.1■■□□□ 1.93
COPS7A-210ENST00000539735 TTC37Q6PGP7 1564 aa27.08■■□□□ 1.93
COPS7A-210ENST00000539735 PPRC1Q5VV67 1664 aaKnown RBP27.06■■□□□ 1.92
COPS7A-210ENST00000539735 EHBP1L1Q8N3D4 1523 aa27.03■■□□□ 1.92
COPS7A-210ENST00000539735 PLCH2O75038 1416 aa27.03■■□□□ 1.92
COPS7A-210ENST00000539735 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
COPS7A-210ENST00000539735 FANCAO15360 1455 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms