RNA–Protein interactions for RNA: ENST00000539587.5

LRTOMT-217, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-217ENST00000539587 KDM4FA0A1W2PPD8 638 aa13.27□□□□□ -0.29
LRTOMT-217ENST00000539587 MAPKBP1O60336 1514 aa13.25□□□□□ -0.29
LRTOMT-217ENST00000539587 FAM69CQ0P6D2 419 aa13.25□□□□□ -0.29
LRTOMT-217ENST00000539587 DIP2BQ9P265 1576 aa13.23□□□□□ -0.29
LRTOMT-217ENST00000539587 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.29
LRTOMT-217ENST00000539587 RUSC2Q8N2Y8 1516 aa13.19□□□□□ -0.3
LRTOMT-217ENST00000539587 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
LRTOMT-217ENST00000539587 ILDR1Q86SU0 546 aaPredicted RBP13.14□□□□□ -0.31
LRTOMT-217ENST00000539587 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
LRTOMT-217ENST00000539587 KDM6BO15054 1643 aa13.13□□□□□ -0.31
LRTOMT-217ENST00000539587 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
LRTOMT-217ENST00000539587 IGF1RP08069 1367 aa13.11□□□□□ -0.31
LRTOMT-217ENST00000539587 PPRC1Q5VV67 1664 aaKnown RBP13.09□□□□□ -0.31
LRTOMT-217ENST00000539587 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
LRTOMT-217ENST00000539587 GLI2P10070 1586 aa13.06□□□□□ -0.32
LRTOMT-217ENST00000539587 PTPRGP23470 1445 aa13.04□□□□□ -0.32
LRTOMT-217ENST00000539587 COL17A1Q9UMD9 1497 aaPredicted RBP13.04□□□□□ -0.32
LRTOMT-217ENST00000539587 ABCC2Q92887 1545 aa13.03□□□□□ -0.32
LRTOMT-217ENST00000539587 CUL7Q14999 1698 aa13.01□□□□□ -0.33
LRTOMT-217ENST00000539587 UHRF1BP1LA0JNW5 1464 aa13□□□□□ -0.33
LRTOMT-217ENST00000539587 PLB1Q6P1J6 1458 aa13□□□□□ -0.33
LRTOMT-217ENST00000539587 ASXL2Q76L83 1435 aa13□□□□□ -0.33
LRTOMT-217ENST00000539587 ADGRL1O94910 1474 aa12.99□□□□□ -0.33
LRTOMT-217ENST00000539587 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
LRTOMT-217ENST00000539587 KIF27Q86VH2 1401 aa12.97□□□□□ -0.33
LRTOMT-217ENST00000539587 CARMIL1Q5VZK9 1371 aa12.95□□□□□ -0.34
LRTOMT-217ENST00000539587 MAP3K4Q9Y6R4 1608 aa12.95□□□□□ -0.34
LRTOMT-217ENST00000539587 DISP1Q96F81 1524 aa12.95□□□□□ -0.34
LRTOMT-217ENST00000539587 EPRSP07814 1512 aaKnown RBP12.94□□□□□ -0.34
LRTOMT-217ENST00000539587 KDM5BQ9UGL1 1544 aa12.94□□□□□ -0.34
LRTOMT-217ENST00000539587 CARMIL2Q6F5E8 1435 aa12.94□□□□□ -0.34
LRTOMT-217ENST00000539587 UACAQ9BZF9 1416 aa12.94□□□□□ -0.34
LRTOMT-217ENST00000539587 HECW2Q9P2P5 1572 aa12.92□□□□□ -0.34
LRTOMT-217ENST00000539587 IQGAP2Q13576 1575 aa12.91□□□□□ -0.34
LRTOMT-217ENST00000539587 TTBK1Q5TCY1 1321 aaPredicted RBP12.88□□□□□ -0.35
LRTOMT-217ENST00000539587 ZCCHC11Q5TAX3 1644 aaKnown RBP12.88□□□□□ -0.35
LRTOMT-217ENST00000539587 UGGT2Q9NYU1 1516 aa12.87□□□□□ -0.35
LRTOMT-217ENST00000539587 TEX14Q8IWB6 1497 aa12.86□□□□□ -0.35
LRTOMT-217ENST00000539587 MAGI3Q5TCQ9 1506 aa12.82□□□□□ -0.36
LRTOMT-217ENST00000539587 KIAA0556O60303 1618 aa12.81□□□□□ -0.36
LRTOMT-217ENST00000539587 WDR7Q9Y4E6 1490 aa12.81□□□□□ -0.36
LRTOMT-217ENST00000539587 CFAP43Q8NDM7 1665 aa12.79□□□□□ -0.36
LRTOMT-217ENST00000539587 RAPGEF2Q9Y4G8 1499 aa12.78□□□□□ -0.36
LRTOMT-217ENST00000539587 CD109Q6YHK3 1445 aa12.78□□□□□ -0.36
LRTOMT-217ENST00000539587 FBXO41Q8TF61 875 aa12.76□□□□□ -0.37
LRTOMT-217ENST00000539587 ABCA8O94911 1581 aa12.75□□□□□ -0.37
LRTOMT-217ENST00000539587 ARAP3Q8WWN8 1544 aa12.74□□□□□ -0.37
LRTOMT-217ENST00000539587 KIF21BO75037 1637 aa12.73□□□□□ -0.37
LRTOMT-217ENST00000539587 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
LRTOMT-217ENST00000539587 ADAMTSL3P82987 1691 aa12.72□□□□□ -0.37
LRTOMT-217ENST00000539587 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
LRTOMT-217ENST00000539587 PTPRMP28827 1452 aa12.68□□□□□ -0.38
LRTOMT-217ENST00000539587 GOLGA3Q08378 1498 aa12.67□□□□□ -0.38
LRTOMT-217ENST00000539587 PHLDB1Q86UU1 1377 aa12.67□□□□□ -0.38
LRTOMT-217ENST00000539587 ATP10BO94823 1461 aa12.65□□□□□ -0.38
LRTOMT-217ENST00000539587 ABCA9Q8IUA7 1624 aa12.64□□□□□ -0.39
LRTOMT-217ENST00000539587 BCORL1Q5H9F3 1711 aa12.62□□□□□ -0.39
LRTOMT-217ENST00000539587 PRXQ9BXM0 1461 aa12.62□□□□□ -0.39
LRTOMT-217ENST00000539587 RAPGEF3O95398 923 aa12.62□□□□□ -0.39
LRTOMT-217ENST00000539587 LMTK3Q96Q04 1460 aa12.61□□□□□ -0.39
LRTOMT-217ENST00000539587 FRMPD1Q5SYB0 1578 aa12.6□□□□□ -0.39
LRTOMT-217ENST00000539587 NEO1Q92859 1461 aa12.59□□□□□ -0.39
LRTOMT-217ENST00000539587 PCF11O94913 1555 aaKnown RBP12.59□□□□□ -0.39
LRTOMT-217ENST00000539587 MADDQ8WXG6 1647 aa12.58□□□□□ -0.4
LRTOMT-217ENST00000539587 SAMD9Q5K651 1589 aa12.53□□□□□ -0.4
LRTOMT-217ENST00000539587 ARID3CA6NKF2 412 aa12.53□□□□□ -0.4
LRTOMT-217ENST00000539587 RICTORQ6R327 1708 aa12.53□□□□□ -0.4
LRTOMT-217ENST00000539587 SIGLEC1Q9BZZ2 1709 aa12.52□□□□□ -0.41
LRTOMT-217ENST00000539587 P3H3Q8IVL6 736 aa12.52□□□□□ -0.41
LRTOMT-217ENST00000539587 FHOD3Q2V2M9 1422 aa12.52□□□□□ -0.41
LRTOMT-217ENST00000539587 RAPGEF6Q8TEU7 1601 aa12.51□□□□□ -0.41
LRTOMT-217ENST00000539587 RIMS1Q86UR5 1692 aaKnown RBP12.51□□□□□ -0.41
LRTOMT-217ENST00000539587 HSPA2P54652 639 aa12.5□□□□□ -0.41
LRTOMT-217ENST00000539587 NUP153P49790 1475 aaKnown RBP12.5□□□□□ -0.41
LRTOMT-217ENST00000539587 ARHGEF40Q8TER5 1519 aa12.5□□□□□ -0.41
LRTOMT-217ENST00000539587 AKNAQ7Z591 1439 aa12.48□□□□□ -0.41
LRTOMT-217ENST00000539587 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
LRTOMT-217ENST00000539587 CERKQ8TCT0 537 aa12.48□□□□□ -0.41
LRTOMT-217ENST00000539587 DENND4BO75064 1496 aaPredicted RBP12.47□□□□□ -0.41
LRTOMT-217ENST00000539587 ZMYM4Q5VZL5 1548 aa12.47□□□□□ -0.41
LRTOMT-217ENST00000539587 FAM9AQ8IZU1 332 aaPredicted RBP12.45□□□□□ -0.42
LRTOMT-217ENST00000539587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.44□□□□□ -0.42
LRTOMT-217ENST00000539587 YEATS2Q9ULM3 1422 aa12.44□□□□□ -0.42
LRTOMT-217ENST00000539587 MAGI2Q86UL8 1455 aa12.43□□□□□ -0.42
LRTOMT-217ENST00000539587 FANCAO15360 1455 aa12.42□□□□□ -0.42
LRTOMT-217ENST00000539587 PLEKHD1A6NEE1 506 aa12.42□□□□□ -0.42
LRTOMT-217ENST00000539587 ILDR2Q71H61 639 aa12.42□□□□□ -0.42
LRTOMT-217ENST00000539587 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
LRTOMT-217ENST00000539587 TTC37Q6PGP7 1564 aa12.42□□□□□ -0.42
LRTOMT-217ENST00000539587 SETD1BQ9UPS6 1966 aaKnown RBP12.41□□□□□ -0.42
LRTOMT-217ENST00000539587 STRCQ7RTU9 1775 aa12.41□□□□□ -0.42
LRTOMT-217ENST00000539587 POGZQ7Z3K3 1410 aa12.41□□□□□ -0.42
LRTOMT-217ENST00000539587 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
LRTOMT-217ENST00000539587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
LRTOMT-217ENST00000539587 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
LRTOMT-217ENST00000539587 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
LRTOMT-217ENST00000539587 CFAP74Q9C0B2 1584 aa12.39□□□□□ -0.43
LRTOMT-217ENST00000539587 FER1L4A9Z1Z3 1794 aa12.39□□□□□ -0.43
LRTOMT-217ENST00000539587 EFCAB5A4FU69 1503 aa12.39□□□□□ -0.43
LRTOMT-217ENST00000539587 ARHGEF12Q9NZN5 1544 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms