RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
NEK6-212ENST00000539416 GOLGA3Q08378 1498 aa17.69■□□□□ 0.42
NEK6-212ENST00000539416 AQRO60306 1485 aaKnown RBP eCLIP17.68■□□□□ 0.422e-7■□□□□ 10.1
NEK6-212ENST00000539416 CUL7Q14999 1698 aa17.67■□□□□ 0.42
NEK6-212ENST00000539416 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
NEK6-212ENST00000539416 CARMIL1Q5VZK9 1371 aa17.66■□□□□ 0.42
NEK6-212ENST00000539416 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
NEK6-212ENST00000539416 EIF4G3O43432 1585 aaKnown RBP17.65■□□□□ 0.42
NEK6-212ENST00000539416 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
NEK6-212ENST00000539416 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
NEK6-212ENST00000539416 SUPT16HQ9Y5B9 1047 aaKnown RBP17.62■□□□□ 0.41
NEK6-212ENST00000539416 TNIKQ9UKE5 1360 aa17.61■□□□□ 0.41
NEK6-212ENST00000539416 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
NEK6-212ENST00000539416 ADAMTS12P58397 1594 aa17.56■□□□□ 0.4
NEK6-212ENST00000539416 UBTFP17480 764 aaKnown RBP17.55■□□□□ 0.4
NEK6-212ENST00000539416 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
NEK6-212ENST00000539416 SNAPC4Q5SXM2 1469 aa17.53■□□□□ 0.4
NEK6-212ENST00000539416 SYNJ2O15056 1496 aa17.46■□□□□ 0.39
NEK6-212ENST00000539416 CLSPNQ9HAW4 1339 aa17.44■□□□□ 0.38
NEK6-212ENST00000539416 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
NEK6-212ENST00000539416 CTTNBP2Q8WZ74 1663 aa17.42■□□□□ 0.38
NEK6-212ENST00000539416 GRIN2AQ12879 1464 aa17.42■□□□□ 0.38
NEK6-212ENST00000539416 CHMP7Q8WUX9 453 aaPredicted RBP17.38■□□□□ 0.37
NEK6-212ENST00000539416 CLIP1P30622 1438 aa17.37■□□□□ 0.37
NEK6-212ENST00000539416 NUP160Q12769 1436 aa17.33■□□□□ 0.36
NEK6-212ENST00000539416 KIAA0586Q9BVV6 1533 aa17.32■□□□□ 0.36
NEK6-212ENST00000539416 CHD1O14646 1710 aa17.32■□□□□ 0.36
NEK6-212ENST00000539416 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
NEK6-212ENST00000539416 FBLN2P98095 1184 aa17.31■□□□□ 0.36
NEK6-212ENST00000539416 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
NEK6-212ENST00000539416 IQGAP2Q13576 1575 aa17.3■□□□□ 0.36
NEK6-212ENST00000539416 ARHGAP35Q9NRY4 1499 aa17.28■□□□□ 0.36
NEK6-212ENST00000539416 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
NEK6-212ENST00000539416 PRKCSHP14314 528 aaPredicted RBP17.27■□□□□ 0.36
NEK6-212ENST00000539416 RANGAP1P46060 587 aaPredicted RBP17.25■□□□□ 0.35
NEK6-212ENST00000539416 UGGT2Q9NYU1 1516 aa17.25■□□□□ 0.35
NEK6-212ENST00000539416 ARAP1Q96P48 1450 aa17.25■□□□□ 0.35
NEK6-212ENST00000539416 BCANQ96GW7 911 aa17.25■□□□□ 0.35
NEK6-212ENST00000539416 SAMD9Q5K651 1589 aa17.24■□□□□ 0.35
NEK6-212ENST00000539416 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
NEK6-212ENST00000539416 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
NEK6-212ENST00000539416 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
NEK6-212ENST00000539416 JPH4Q96JJ6 628 aa17.16■□□□□ 0.34
NEK6-212ENST00000539416 DISP1Q96F81 1524 aa17.15■□□□□ 0.34
NEK6-212ENST00000539416 SHROOM2Q13796 1616 aa17.14■□□□□ 0.33
NEK6-212ENST00000539416 KIAA0556O60303 1618 aa17.13■□□□□ 0.33
NEK6-212ENST00000539416 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
NEK6-212ENST00000539416 P3H3Q8IVL6 736 aa17.13■□□□□ 0.33
NEK6-212ENST00000539416 KCNH8Q96L42 1107 aa17.12■□□□□ 0.33
NEK6-212ENST00000539416 FKBP8Q14318 412 aa17.11■□□□□ 0.33
NEK6-212ENST00000539416 CARMIL2Q6F5E8 1435 aa17.1■□□□□ 0.33
NEK6-212ENST00000539416 FMN1Q68DA7 1419 aa17.1■□□□□ 0.33
NEK6-212ENST00000539416 MSH5O43196 834 aa17.09■□□□□ 0.33
NEK6-212ENST00000539416 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
NEK6-212ENST00000539416 PRG4Q92954 1404 aaPredicted RBP17.06■□□□□ 0.32
NEK6-212ENST00000539416 CASKIN1Q8WXD9 1431 aa17.05■□□□□ 0.32
NEK6-212ENST00000539416 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
NEK6-212ENST00000539416 PCF11O94913 1555 aaKnown RBP17.03■□□□□ 0.32
NEK6-212ENST00000539416 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
NEK6-212ENST00000539416 ITGAEP38570 1179 aa16.99■□□□□ 0.31
NEK6-212ENST00000539416 APLP2Q06481 763 aa16.98■□□□□ 0.31
NEK6-212ENST00000539416 ERCC6L2Q5T890 1561 aa16.96■□□□□ 0.31
NEK6-212ENST00000539416 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
NEK6-212ENST00000539416 HECW1Q76N89 1606 aa16.95■□□□□ 0.3
NEK6-212ENST00000539416 RAPGEF6Q8TEU7 1601 aa16.94■□□□□ 0.3
NEK6-212ENST00000539416 PTPRGP23470 1445 aa16.94■□□□□ 0.3
NEK6-212ENST00000539416 TIAM1Q13009 1591 aa16.94■□□□□ 0.3
NEK6-212ENST00000539416 CFAP43Q8NDM7 1665 aa16.93■□□□□ 0.3
NEK6-212ENST00000539416 ABCA8O94911 1581 aa16.92■□□□□ 0.3
NEK6-212ENST00000539416 LRRIQ1Q96JM4 1722 aa16.91■□□□□ 0.3
NEK6-212ENST00000539416 CCDC18Q5T9S5 1454 aa16.9■□□□□ 0.3
NEK6-212ENST00000539416 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.3
NEK6-212ENST00000539416 PLB1Q6P1J6 1458 aa16.88■□□□□ 0.29
NEK6-212ENST00000539416 EPRSP07814 1512 aaKnown RBP16.88■□□□□ 0.29
NEK6-212ENST00000539416 NUP153P49790 1475 aaKnown RBP16.88■□□□□ 0.29
NEK6-212ENST00000539416 NEFLP07196 543 aa16.87■□□□□ 0.29
NEK6-212ENST00000539416 KANK4Q5T7N3 995 aaPredicted RBP16.86■□□□□ 0.29
NEK6-212ENST00000539416 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
NEK6-212ENST00000539416 UACAQ9BZF9 1416 aa16.85■□□□□ 0.29
NEK6-212ENST00000539416 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.28
NEK6-212ENST00000539416 FANCIQ9NVI1 1328 aa16.83■□□□□ 0.28
NEK6-212ENST00000539416 ERICH6Q7L0X2 663 aa16.82■□□□□ 0.28
NEK6-212ENST00000539416 CDK13Q14004 1512 aaKnown RBP16.81■□□□□ 0.28
NEK6-212ENST00000539416 ABCC2Q92887 1545 aa16.81■□□□□ 0.28
NEK6-212ENST00000539416 DEKP35659 375 aaKnown RBP16.8■□□□□ 0.28
NEK6-212ENST00000539416 ATP10BO94823 1461 aa16.79■□□□□ 0.28
NEK6-212ENST00000539416 EHBP1L1Q8N3D4 1523 aa16.78■□□□□ 0.28
NEK6-212ENST00000539416 ANO8Q9HCE9 1232 aaPredicted RBP16.78■□□□□ 0.28
NEK6-212ENST00000539416 TRIM52Q96A61 297 aa16.78■□□□□ 0.28
NEK6-212ENST00000539416 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
NEK6-212ENST00000539416 MAGI3Q5TCQ9 1506 aa16.77■□□□□ 0.27
NEK6-212ENST00000539416 MTUS2Q5JR59 1369 aa16.76■□□□□ 0.27
NEK6-212ENST00000539416 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
NEK6-212ENST00000539416 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
NEK6-212ENST00000539416 ARID3CA6NKF2 412 aa16.73■□□□□ 0.27
NEK6-212ENST00000539416 KDM5BQ9UGL1 1544 aa16.72■□□□□ 0.27
NEK6-212ENST00000539416 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
NEK6-212ENST00000539416 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
NEK6-212ENST00000539416 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
NEK6-212ENST00000539416 ADCY10Q96PN6 1610 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms