RNA–Protein interactions for RNA: ENST00000538261.7

CLDN7-203, Transcript of claudin 7, humanhuman

TSL 5 BASIC

Gene CLDN7, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-203ENST00000538261 MAGI1Q96QZ7 1491 aaPredicted RBP27.37■■□□□ 1.97
CLDN7-203ENST00000538261 PCGF6Q9BYE7 350 aa27.37■■□□□ 1.97
CLDN7-203ENST00000538261 VPS8Q8N3P4 1428 aa27.36■■□□□ 1.97
CLDN7-203ENST00000538261 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
CLDN7-203ENST00000538261 SYNJ2O15056 1496 aa27.26■■□□□ 1.96
CLDN7-203ENST00000538261 EFCAB5A4FU69 1503 aa27.24■■□□□ 1.95
CLDN7-203ENST00000538261 SAMD9Q5K651 1589 aa27.2■■□□□ 1.94
CLDN7-203ENST00000538261 IQGAP2Q13576 1575 aa27.19■■□□□ 1.94
CLDN7-203ENST00000538261 CEP170Q5SW79 1584 aa27.13■■□□□ 1.93
CLDN7-203ENST00000538261 KIAA0586Q9BVV6 1533 aa27.11■■□□□ 1.93
CLDN7-203ENST00000538261 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
CLDN7-203ENST00000538261 FHOD3Q2V2M9 1422 aa27.1■■□□□ 1.93
CLDN7-203ENST00000538261 PPARGC1BQ86YN6 1023 aaKnown RBP27.1■■□□□ 1.93
CLDN7-203ENST00000538261 NUP160Q12769 1436 aa27.09■■□□□ 1.93
CLDN7-203ENST00000538261 TRIM26Q12899 539 aaPredicted RBP27.07■■□□□ 1.92
CLDN7-203ENST00000538261 UGGT2Q9NYU1 1516 aa27.07■■□□□ 1.92
CLDN7-203ENST00000538261 P3H3Q8IVL6 736 aa27.03■■□□□ 1.92
CLDN7-203ENST00000538261 CHD1O14646 1710 aa27.02■■□□□ 1.92
CLDN7-203ENST00000538261 PCF11O94913 1555 aaKnown RBP27.01■■□□□ 1.91
CLDN7-203ENST00000538261 FBLN2P98095 1184 aa27.01■■□□□ 1.91
CLDN7-203ENST00000538261 FMN1Q68DA7 1419 aa26.95■■□□□ 1.91
CLDN7-203ENST00000538261 KIAA0556O60303 1618 aa26.94■■□□□ 1.9
CLDN7-203ENST00000538261 DISP1Q96F81 1524 aa26.93■■□□□ 1.9
CLDN7-203ENST00000538261 FYCO1Q9BQS8 1478 aa26.93■■□□□ 1.9
CLDN7-203ENST00000538261 APLP2Q06481 763 aa26.93■■□□□ 1.9
CLDN7-203ENST00000538261 CASKIN1Q8WXD9 1431 aa26.92■■□□□ 1.9
CLDN7-203ENST00000538261 MAP3K1Q13233 1512 aa26.91■■□□□ 1.9
CLDN7-203ENST00000538261 TIAM1Q13009 1591 aa26.89■■□□□ 1.9
CLDN7-203ENST00000538261 TTBK1Q5TCY1 1321 aaPredicted RBP26.88■■□□□ 1.89
CLDN7-203ENST00000538261 CFAP43Q8NDM7 1665 aa26.88■■□□□ 1.89
CLDN7-203ENST00000538261 KANK4Q5T7N3 995 aaPredicted RBP26.81■■□□□ 1.88
CLDN7-203ENST00000538261 LRRIQ1Q96JM4 1722 aa26.8■■□□□ 1.88
CLDN7-203ENST00000538261 JPH4Q96JJ6 628 aa26.78■■□□□ 1.88
CLDN7-203ENST00000538261 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
CLDN7-203ENST00000538261 LRRC9Q6ZRR7 1453 aa26.74■■□□□ 1.87
CLDN7-203ENST00000538261 HECW1Q76N89 1606 aa26.73■■□□□ 1.87
CLDN7-203ENST00000538261 CARMIL2Q6F5E8 1435 aa26.73■■□□□ 1.87
CLDN7-203ENST00000538261 CLASP1Q7Z460 1538 aa26.72■■□□□ 1.87
CLDN7-203ENST00000538261 ZEB1P37275 1124 aaPredicted RBP26.7■■□□□ 1.86
CLDN7-203ENST00000538261 ATP1B4Q9UN42 357 aaPredicted RBP26.68■■□□□ 1.86
CLDN7-203ENST00000538261 PRG4Q92954 1404 aaPredicted RBP26.66■■□□□ 1.86
CLDN7-203ENST00000538261 RAPGEF6Q8TEU7 1601 aa26.65■■□□□ 1.86
CLDN7-203ENST00000538261 CCDC18Q5T9S5 1454 aa26.65■■□□□ 1.86
CLDN7-203ENST00000538261 EPRSP07814 1512 aaKnown RBP26.61■■□□□ 1.85
CLDN7-203ENST00000538261 NUP153P49790 1475 aaKnown RBP26.59■■□□□ 1.85
CLDN7-203ENST00000538261 PLB1Q6P1J6 1458 aa26.57■■□□□ 1.84
CLDN7-203ENST00000538261 CDK13Q14004 1512 aaKnown RBP26.56■■□□□ 1.84
CLDN7-203ENST00000538261 ERCC6L2Q5T890 1561 aa26.55■■□□□ 1.84
CLDN7-203ENST00000538261 RRBP1Q9P2E9 1410 aaKnown RBP26.55■■□□□ 1.84
CLDN7-203ENST00000538261 MAGI3Q5TCQ9 1506 aa26.55■■□□□ 1.84
CLDN7-203ENST00000538261 ABCA8O94911 1581 aa26.55■■□□□ 1.84
CLDN7-203ENST00000538261 EHBP1L1Q8N3D4 1523 aa26.54■■□□□ 1.84
CLDN7-203ENST00000538261 MTUS2Q5JR59 1369 aa26.5■■□□□ 1.83
CLDN7-203ENST00000538261 PHLDB1Q86UU1 1377 aa26.5■■□□□ 1.83
CLDN7-203ENST00000538261 PTPRGP23470 1445 aa26.46■■□□□ 1.83
CLDN7-203ENST00000538261 SUPT6HQ7KZ85 1726 aaKnown RBP26.46■■□□□ 1.83
CLDN7-203ENST00000538261 ARHGEF11O15085 1522 aa26.43■■□□□ 1.82
CLDN7-203ENST00000538261 CCNB3Q8WWL7 1395 aa26.43■■□□□ 1.82
CLDN7-203ENST00000538261 NCOA2Q15596 1464 aa26.42■■□□□ 1.82
CLDN7-203ENST00000538261 ARID3CA6NKF2 412 aa26.41■■□□□ 1.82
CLDN7-203ENST00000538261 UACAQ9BZF9 1416 aa26.34■■□□□ 1.81
CLDN7-203ENST00000538261 OSCARQ8IYS5 282 aa26.34■■□□□ 1.81
CLDN7-203ENST00000538261 ATP10BO94823 1461 aa26.32■■□□□ 1.8
CLDN7-203ENST00000538261 ABCC2Q92887 1545 aa26.31■■□□□ 1.8
CLDN7-203ENST00000538261 FGD6Q6ZV73 1430 aa26.31■■□□□ 1.8
CLDN7-203ENST00000538261 MYOM3Q5VTT5 1437 aa26.3■■□□□ 1.8
CLDN7-203ENST00000538261 TROQ12816 1431 aaPredicted RBP26.29■■□□□ 1.8
CLDN7-203ENST00000538261 HNRNPUL2Q1KMD3 747 aaKnown RBP26.29■■□□□ 1.8
CLDN7-203ENST00000538261 ADCY10Q96PN6 1610 aa26.28■■□□□ 1.8
CLDN7-203ENST00000538261 CDK11AQ9UQ88 783 aaPredicted RBP26.27■■□□□ 1.8
CLDN7-203ENST00000538261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.26■■□□□ 1.79
CLDN7-203ENST00000538261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.25■■□□□ 1.79
CLDN7-203ENST00000538261 UHRF1BP1LA0JNW5 1464 aa26.24■■□□□ 1.79
CLDN7-203ENST00000538261 PELP1Q8IZL8 1130 aaKnown RBP26.23■■□□□ 1.79
CLDN7-203ENST00000538261 KIF14Q15058 1648 aa26.22■■□□□ 1.79
CLDN7-203ENST00000538261 PTPN23Q9H3S7 1636 aa26.19■■□□□ 1.78
CLDN7-203ENST00000538261 TCOF1Q13428 1488 aaKnown RBP26.16■■□□□ 1.78
CLDN7-203ENST00000538261 FAM50AQ14320 339 aaKnown RBP26.16■■□□□ 1.78
CLDN7-203ENST00000538261 MIA2Q96PC5 1412 aa26.15■■□□□ 1.78
CLDN7-203ENST00000538261 KDM5BQ9UGL1 1544 aa26.14■■□□□ 1.78
CLDN7-203ENST00000538261 ZCCHC11Q5TAX3 1644 aaKnown RBP26.14■■□□□ 1.78
CLDN7-203ENST00000538261 PLEKHD1A6NEE1 506 aa26.12■■□□□ 1.77
CLDN7-203ENST00000538261 ABCC10Q5T3U5 1492 aa26.11■■□□□ 1.77
CLDN7-203ENST00000538261 ITSN2Q9NZM3 1697 aa26.11■■□□□ 1.77
CLDN7-203ENST00000538261 ITGAEP38570 1179 aa26.08■■□□□ 1.77
CLDN7-203ENST00000538261 GPATCH8Q9UKJ3 1502 aaKnown RBP26.07■■□□□ 1.76
CLDN7-203ENST00000538261 CDC42BPAQ5VT25 1732 aa26.05■■□□□ 1.76
CLDN7-203ENST00000538261 PTPRKQ15262 1439 aa26.02■■□□□ 1.76
CLDN7-203ENST00000538261 CCER1Q8TC90 406 aaPredicted RBP25.98■■□□□ 1.75
CLDN7-203ENST00000538261 TTC37Q6PGP7 1564 aa25.97■■□□□ 1.75
CLDN7-203ENST00000538261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.96■■□□□ 1.75
CLDN7-203ENST00000538261 CAMSAP2Q08AD1 1489 aa25.95■■□□□ 1.75
CLDN7-203ENST00000538261 PREX2Q70Z35 1606 aa25.95■■□□□ 1.74
CLDN7-203ENST00000538261 DNMT1P26358 1616 aaKnown RBP25.94■■□□□ 1.74
CLDN7-203ENST00000538261 SETD5Q9C0A6 1442 aa25.93■■□□□ 1.74
CLDN7-203ENST00000538261 CFDP1Q9UEE9 299 aaPredicted RBP25.92■■□□□ 1.74
CLDN7-203ENST00000538261 RAB3GAP2Q9H2M9 1393 aa25.92■■□□□ 1.74
CLDN7-203ENST00000538261 ZNF644Q9H582 1327 aaPredicted RBP25.91■■□□□ 1.74
CLDN7-203ENST00000538261 CDC42BPBQ9Y5S2 1711 aa25.91■■□□□ 1.74
CLDN7-203ENST00000538261 HFM1A2PYH4 1435 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms