RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 CLIP1P30622 1438 aa18.71■□□□□ 0.59
SPARC-207ENST00000537849 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
SPARC-207ENST00000537849 NUP160Q12769 1436 aa18.65■□□□□ 0.58
SPARC-207ENST00000537849 KIAA0586Q9BVV6 1533 aa18.64■□□□□ 0.58
SPARC-207ENST00000537849 CHD1O14646 1710 aa18.64■□□□□ 0.57
SPARC-207ENST00000537849 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
SPARC-207ENST00000537849 ARHGAP35Q9NRY4 1499 aa18.63■□□□□ 0.57
SPARC-207ENST00000537849 IQGAP2Q13576 1575 aa18.59■□□□□ 0.57
SPARC-207ENST00000537849 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
SPARC-207ENST00000537849 P3H3Q8IVL6 736 aa18.55■□□□□ 0.56
SPARC-207ENST00000537849 JPH4Q96JJ6 628 aa18.55■□□□□ 0.56
SPARC-207ENST00000537849 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
SPARC-207ENST00000537849 EFCAB5A4FU69 1503 aa18.53■□□□□ 0.56
SPARC-207ENST00000537849 SAMD9Q5K651 1589 aa18.52■□□□□ 0.56
SPARC-207ENST00000537849 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
SPARC-207ENST00000537849 DISP1Q96F81 1524 aa18.48■□□□□ 0.55
SPARC-207ENST00000537849 FHOD3Q2V2M9 1422 aa18.48■□□□□ 0.55
SPARC-207ENST00000537849 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
SPARC-207ENST00000537849 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
SPARC-207ENST00000537849 SHROOM2Q13796 1616 aa18.41■□□□□ 0.54
SPARC-207ENST00000537849 KIAA0556O60303 1618 aa18.41■□□□□ 0.54
SPARC-207ENST00000537849 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
SPARC-207ENST00000537849 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.53
SPARC-207ENST00000537849 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
SPARC-207ENST00000537849 CASKIN1Q8WXD9 1431 aa18.34■□□□□ 0.53
SPARC-207ENST00000537849 PPARGC1BQ86YN6 1023 aaKnown RBP18.33■□□□□ 0.52
SPARC-207ENST00000537849 ERCC6L2Q5T890 1561 aa18.31■□□□□ 0.52
SPARC-207ENST00000537849 PCF11O94913 1555 aaKnown RBP18.3■□□□□ 0.52
SPARC-207ENST00000537849 APLP2Q06481 763 aa18.3■□□□□ 0.52
SPARC-207ENST00000537849 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
SPARC-207ENST00000537849 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
SPARC-207ENST00000537849 ATP1B4Q9UN42 357 aaPredicted RBP18.28■□□□□ 0.52
SPARC-207ENST00000537849 PTPRGP23470 1445 aa18.27■□□□□ 0.52
SPARC-207ENST00000537849 MAP3K1Q13233 1512 aa18.27■□□□□ 0.51
SPARC-207ENST00000537849 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
SPARC-207ENST00000537849 LRRIQ1Q96JM4 1722 aa18.23■□□□□ 0.51
SPARC-207ENST00000537849 PLB1Q6P1J6 1458 aa18.21■□□□□ 0.51
SPARC-207ENST00000537849 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
SPARC-207ENST00000537849 ABCA8O94911 1581 aa18.21■□□□□ 0.51
SPARC-207ENST00000537849 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
SPARC-207ENST00000537849 HECW1Q76N89 1606 aa18.18■□□□□ 0.5
SPARC-207ENST00000537849 NUP153P49790 1475 aaKnown RBP18.18■□□□□ 0.5
SPARC-207ENST00000537849 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
SPARC-207ENST00000537849 EPRSP07814 1512 aaKnown RBP18.17■□□□□ 0.5
SPARC-207ENST00000537849 LRRC9Q6ZRR7 1453 aa18.15■□□□□ 0.5
SPARC-207ENST00000537849 UACAQ9BZF9 1416 aa18.15■□□□□ 0.5
SPARC-207ENST00000537849 TRIM26Q12899 539 aaPredicted RBP18.14■□□□□ 0.49
SPARC-207ENST00000537849 CCDC18Q5T9S5 1454 aa18.14■□□□□ 0.49
SPARC-207ENST00000537849 ARID3CA6NKF2 412 aa18.12■□□□□ 0.49
SPARC-207ENST00000537849 ATP10BO94823 1461 aa18.11■□□□□ 0.49
SPARC-207ENST00000537849 CDK13Q14004 1512 aaKnown RBP18.11■□□□□ 0.49
SPARC-207ENST00000537849 UHRF1BP1LA0JNW5 1464 aa18.08■□□□□ 0.49
SPARC-207ENST00000537849 MAGI3Q5TCQ9 1506 aa18.08■□□□□ 0.48
SPARC-207ENST00000537849 ABCC2Q92887 1545 aa18.07■□□□□ 0.48
SPARC-207ENST00000537849 MTUS2Q5JR59 1369 aa18.06■□□□□ 0.48
SPARC-207ENST00000537849 ARHGEF11O15085 1522 aa18.06■□□□□ 0.48
SPARC-207ENST00000537849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
SPARC-207ENST00000537849 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
SPARC-207ENST00000537849 CDK11AQ9UQ88 783 aaPredicted RBP18.05■□□□□ 0.48
SPARC-207ENST00000537849 PCGF6Q9BYE7 350 aa18.04■□□□□ 0.48
SPARC-207ENST00000537849 PLEKHD1A6NEE1 506 aa18.01■□□□□ 0.47
SPARC-207ENST00000537849 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
SPARC-207ENST00000537849 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
SPARC-207ENST00000537849 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
SPARC-207ENST00000537849 EHBP1L1Q8N3D4 1523 aa18■□□□□ 0.47
SPARC-207ENST00000537849 KDM5BQ9UGL1 1544 aa18■□□□□ 0.47
SPARC-207ENST00000537849 ADCY10Q96PN6 1610 aa18■□□□□ 0.47
SPARC-207ENST00000537849 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
SPARC-207ENST00000537849 PHLDB1Q86UU1 1377 aa17.98■□□□□ 0.47
SPARC-207ENST00000537849 SUPT6HQ7KZ85 1726 aaKnown RBP17.97■□□□□ 0.47
SPARC-207ENST00000537849 NCOA2Q15596 1464 aa17.96■□□□□ 0.47
SPARC-207ENST00000537849 ZCCHC11Q5TAX3 1644 aaKnown RBP17.95■□□□□ 0.46
SPARC-207ENST00000537849 CYB5RLQ6IPT4 315 aa17.95■□□□□ 0.46
SPARC-207ENST00000537849 RRBP1Q9P2E9 1410 aaKnown RBP17.94■□□□□ 0.46
SPARC-207ENST00000537849 CCNB3Q8WWL7 1395 aa17.89■□□□□ 0.45
SPARC-207ENST00000537849 KIF14Q15058 1648 aa17.88■□□□□ 0.45
SPARC-207ENST00000537849 NPM1P06748 294 aaKnown RBP eCLIP17.88■□□□□ 0.45
SPARC-207ENST00000537849 MYOM3Q5VTT5 1437 aa17.88■□□□□ 0.45
SPARC-207ENST00000537849 ABCC10Q5T3U5 1492 aa17.87■□□□□ 0.45
SPARC-207ENST00000537849 FGD6Q6ZV73 1430 aa17.85■□□□□ 0.45
SPARC-207ENST00000537849 KCNH8Q96L42 1107 aa17.85■□□□□ 0.45
SPARC-207ENST00000537849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.83■□□□□ 0.45
SPARC-207ENST00000537849 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
SPARC-207ENST00000537849 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
SPARC-207ENST00000537849 MIA2Q96PC5 1412 aa17.81■□□□□ 0.44
SPARC-207ENST00000537849 FAM50AQ14320 339 aaKnown RBP17.8■□□□□ 0.44
SPARC-207ENST00000537849 WDR7Q9Y4E6 1490 aa17.8■□□□□ 0.44
SPARC-207ENST00000537849 CDC42BPAQ5VT25 1732 aa17.79■□□□□ 0.44
SPARC-207ENST00000537849 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.78■□□□□ 0.44
SPARC-207ENST00000537849 TCOF1Q13428 1488 aaKnown RBP17.78■□□□□ 0.44
SPARC-207ENST00000537849 PTPN23Q9H3S7 1636 aa17.78■□□□□ 0.44
SPARC-207ENST00000537849 CFDP1Q9UEE9 299 aaPredicted RBP17.77■□□□□ 0.44
SPARC-207ENST00000537849 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
SPARC-207ENST00000537849 ZNF644Q9H582 1327 aaPredicted RBP17.75■□□□□ 0.43
SPARC-207ENST00000537849 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
SPARC-207ENST00000537849 CDC42BPBQ9Y5S2 1711 aa17.74■□□□□ 0.43
SPARC-207ENST00000537849 TTC37Q6PGP7 1564 aa17.74■□□□□ 0.43
SPARC-207ENST00000537849 ITGAEP38570 1179 aa17.72■□□□□ 0.43
SPARC-207ENST00000537849 MAPKBP1O60336 1514 aa17.72■□□□□ 0.43
SPARC-207ENST00000537849 PLCH2O75038 1416 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms