RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
SNX17-210ENST00000537606 ATP1B4Q9UN42 357 aaPredicted RBP26.46■■□□□ 1.83
SNX17-210ENST00000537606 FHOD3Q2V2M9 1422 aa26.45■■□□□ 1.83
SNX17-210ENST00000537606 CTTNBP2Q8WZ74 1663 aa26.42■■□□□ 1.82
SNX17-210ENST00000537606 WDR62O43379 1518 aa26.41■■□□□ 1.82
SNX17-210ENST00000537606 ZNF608Q9ULD9 1512 aaPredicted RBP26.4■■□□□ 1.82
SNX17-210ENST00000537606 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
SNX17-210ENST00000537606 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
SNX17-210ENST00000537606 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
SNX17-210ENST00000537606 EFCAB5A4FU69 1503 aa26.32■■□□□ 1.8
SNX17-210ENST00000537606 PCF11O94913 1555 aaKnown RBP26.31■■□□□ 1.8
SNX17-210ENST00000537606 GRIN2BQ13224 1484 aa26.31■■□□□ 1.8
SNX17-210ENST00000537606 TIAM1Q13009 1591 aa26.3■■□□□ 1.8
SNX17-210ENST00000537606 ADAMTS12P58397 1594 aa26.25■■□□□ 1.79
SNX17-210ENST00000537606 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
SNX17-210ENST00000537606 LRRC9Q6ZRR7 1453 aa26.23■■□□□ 1.79
SNX17-210ENST00000537606 MAP3K1Q13233 1512 aa26.23■■□□□ 1.79
SNX17-210ENST00000537606 RRBP1Q9P2E9 1410 aaKnown RBP26.22■■□□□ 1.79
SNX17-210ENST00000537606 ITGAEP38570 1179 aa26.2■■□□□ 1.78
SNX17-210ENST00000537606 CASKIN1Q8WXD9 1431 aa26.2■■□□□ 1.78
SNX17-210ENST00000537606 FMN1Q68DA7 1419 aa26.19■■□□□ 1.78
SNX17-210ENST00000537606 CCNB3Q8WWL7 1395 aa26.19■■□□□ 1.78
SNX17-210ENST00000537606 SAMD9Q5K651 1589 aa26.18■■□□□ 1.78
SNX17-210ENST00000537606 FYCO1Q9BQS8 1478 aa26.18■■□□□ 1.78
SNX17-210ENST00000537606 EIF4G3O43432 1585 aaKnown RBP26.17■■□□□ 1.78
SNX17-210ENST00000537606 SNAPC4Q5SXM2 1469 aa26.16■■□□□ 1.78
SNX17-210ENST00000537606 PHLDB1Q86UU1 1377 aa26.13■■□□□ 1.77
SNX17-210ENST00000537606 CFAP43Q8NDM7 1665 aa26.13■■□□□ 1.77
SNX17-210ENST00000537606 IQGAP2Q13576 1575 aa26.1■■□□□ 1.77
SNX17-210ENST00000537606 FBLN2P98095 1184 aa26.08■■□□□ 1.77
SNX17-210ENST00000537606 FAM50AQ14320 339 aaKnown RBP26.05■■□□□ 1.76
SNX17-210ENST00000537606 CHMP7Q8WUX9 453 aaPredicted RBP26.04■■□□□ 1.76
SNX17-210ENST00000537606 GRIN2AQ12879 1464 aa26.02■■□□□ 1.76
SNX17-210ENST00000537606 MTUS2Q5JR59 1369 aa26■■□□□ 1.75
SNX17-210ENST00000537606 LRRIQ1Q96JM4 1722 aa25.99■■□□□ 1.75
SNX17-210ENST00000537606 ARID3CA6NKF2 412 aa25.98■■□□□ 1.75
SNX17-210ENST00000537606 KIAA0586Q9BVV6 1533 aa25.97■■□□□ 1.75
SNX17-210ENST00000537606 MAGI1Q96QZ7 1491 aaPredicted RBP25.96■■□□□ 1.75
SNX17-210ENST00000537606 UGGT2Q9NYU1 1516 aa25.93■■□□□ 1.74
SNX17-210ENST00000537606 SYNJ2O15056 1496 aa25.92■■□□□ 1.74
SNX17-210ENST00000537606 DHX57Q6P158 1386 aaKnown RBP25.91■■□□□ 1.74
SNX17-210ENST00000537606 DISP1Q96F81 1524 aa25.88■■□□□ 1.73
SNX17-210ENST00000537606 CEP170Q5SW79 1584 aa25.87■■□□□ 1.73
SNX17-210ENST00000537606 MAGI3Q5TCQ9 1506 aa25.83■■□□□ 1.73
SNX17-210ENST00000537606 RAB3GAP2Q9H2M9 1393 aa25.83■■□□□ 1.73
SNX17-210ENST00000537606 KIAA0556O60303 1618 aa25.83■■□□□ 1.73
SNX17-210ENST00000537606 NCOA2Q15596 1464 aa25.82■■□□□ 1.72
SNX17-210ENST00000537606 FGD6Q6ZV73 1430 aa25.81■■□□□ 1.72
SNX17-210ENST00000537606 EPRSP07814 1512 aaKnown RBP25.81■■□□□ 1.72
SNX17-210ENST00000537606 CDK13Q14004 1512 aaKnown RBP25.81■■□□□ 1.72
SNX17-210ENST00000537606 HECW1Q76N89 1606 aa25.81■■□□□ 1.72
SNX17-210ENST00000537606 CCDC18Q5T9S5 1454 aa25.8■■□□□ 1.72
SNX17-210ENST00000537606 JPH4Q96JJ6 628 aa25.78■■□□□ 1.72
SNX17-210ENST00000537606 EHBP1L1Q8N3D4 1523 aa25.77■■□□□ 1.72
SNX17-210ENST00000537606 SETD5Q9C0A6 1442 aa25.76■■□□□ 1.71
SNX17-210ENST00000537606 NUP160Q12769 1436 aa25.75■■□□□ 1.71
SNX17-210ENST00000537606 SUPT6HQ7KZ85 1726 aaKnown RBP25.75■■□□□ 1.71
SNX17-210ENST00000537606 MYOM3Q5VTT5 1437 aa25.73■■□□□ 1.71
SNX17-210ENST00000537606 DIEXFQ68CQ4 756 aaKnown RBP25.73■■□□□ 1.71
SNX17-210ENST00000537606 CLSPNQ9HAW4 1339 aa25.72■■□□□ 1.71
SNX17-210ENST00000537606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.71■■□□□ 1.71
SNX17-210ENST00000537606 NUP153P49790 1475 aaKnown RBP25.67■■□□□ 1.7
SNX17-210ENST00000537606 ZNF316A6NFI3 1004 aaPredicted RBP25.66■■□□□ 1.7
SNX17-210ENST00000537606 PTPRKQ15262 1439 aa25.66■■□□□ 1.7
SNX17-210ENST00000537606 PLB1Q6P1J6 1458 aa25.65■■□□□ 1.7
SNX17-210ENST00000537606 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
SNX17-210ENST00000537606 CARMIL2Q6F5E8 1435 aa25.64■■□□□ 1.7
SNX17-210ENST00000537606 RAPGEF6Q8TEU7 1601 aa25.64■■□□□ 1.7
SNX17-210ENST00000537606 PTPN23Q9H3S7 1636 aa25.59■■□□□ 1.69
SNX17-210ENST00000537606 CHIC2Q9UKJ5 165 aa25.56■■□□□ 1.68
SNX17-210ENST00000537606 MAPKBP1O60336 1514 aa25.56■■□□□ 1.68
SNX17-210ENST00000537606 CDK11AQ9UQ88 783 aaPredicted RBP25.55■■□□□ 1.68
SNX17-210ENST00000537606 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
SNX17-210ENST00000537606 CHD1O14646 1710 aa25.52■■□□□ 1.68
SNX17-210ENST00000537606 RRP7BPQ9NSQ0 103 aa25.51■■□□□ 1.67
SNX17-210ENST00000537606 SIN3AQ96ST3 1273 aa25.5■■□□□ 1.67
SNX17-210ENST00000537606 NEUROD1Q13562 356 aa25.48■■□□□ 1.67
SNX17-210ENST00000537606 HFM1A2PYH4 1435 aa25.48■■□□□ 1.67
SNX17-210ENST00000537606 TCOF1Q13428 1488 aaKnown RBP25.48■■□□□ 1.67
SNX17-210ENST00000537606 ZNF644Q9H582 1327 aaPredicted RBP25.47■■□□□ 1.67
SNX17-210ENST00000537606 NAIPQ13075 1403 aa25.46■■□□□ 1.67
SNX17-210ENST00000537606 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
SNX17-210ENST00000537606 TROQ12816 1431 aaPredicted RBP25.44■■□□□ 1.66
SNX17-210ENST00000537606 PTPRGP23470 1445 aa25.41■■□□□ 1.66
SNX17-210ENST00000537606 ABCA8O94911 1581 aa25.4■■□□□ 1.66
SNX17-210ENST00000537606 PLEKHD1A6NEE1 506 aa25.37■■□□□ 1.65
SNX17-210ENST00000537606 ATP10BO94823 1461 aa25.37■■□□□ 1.65
SNX17-210ENST00000537606 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
SNX17-210ENST00000537606 KIF14Q15058 1648 aa25.36■■□□□ 1.65
SNX17-210ENST00000537606 CFDP1Q9UEE9 299 aaPredicted RBP25.35■■□□□ 1.65
SNX17-210ENST00000537606 UACAQ9BZF9 1416 aa25.33■■□□□ 1.65
SNX17-210ENST00000537606 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
SNX17-210ENST00000537606 GPATCH8Q9UKJ3 1502 aaKnown RBP25.3■■□□□ 1.64
SNX17-210ENST00000537606 DAPK1P53355 1430 aa25.3■■□□□ 1.64
SNX17-210ENST00000537606 ABCC5O15440 1437 aa25.29■■□□□ 1.64
SNX17-210ENST00000537606 TRIM52Q96A61 297 aa25.29■■□□□ 1.64
SNX17-210ENST00000537606 KDM6BO15054 1643 aa25.27■■□□□ 1.64
SNX17-210ENST00000537606 MIER1Q8N108 512 aa25.27■■□□□ 1.64
SNX17-210ENST00000537606 SHROOM2Q13796 1616 aa25.26■■□□□ 1.63
SNX17-210ENST00000537606 ADCY10Q96PN6 1610 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms