RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 KIAA0586Q9BVV6 1533 aa35.07■■■■□ 3.2
LPCAT3-204ENST00000536797 PRXQ9BXM0 1461 aa35.04■■■■□ 3.2
LPCAT3-204ENST00000536797 CSRNP3Q8WYN3 585 aa35.04■■■■□ 3.2
LPCAT3-204ENST00000536797 ARAP1Q96P48 1450 aa35.02■■■■□ 3.2
LPCAT3-204ENST00000536797 JPH4Q96JJ6 628 aa35■■■■□ 3.19
LPCAT3-204ENST00000536797 CYB5RLQ6IPT4 315 aa34.97■■■■□ 3.19
LPCAT3-204ENST00000536797 FAM9AQ8IZU1 332 aaPredicted RBP34.97■■■■□ 3.19
LPCAT3-204ENST00000536797 ERCC6L2Q5T890 1561 aa34.96■■■■□ 3.19
LPCAT3-204ENST00000536797 PRG4Q92954 1404 aaPredicted RBP34.94■■■■□ 3.18
LPCAT3-204ENST00000536797 IQGAP2Q13576 1575 aa34.91■■■■□ 3.18
LPCAT3-204ENST00000536797 CTTNBP2Q8WZ74 1663 aa34.86■■■■□ 3.17
LPCAT3-204ENST00000536797 KIF21BO75037 1637 aa34.76■■■■□ 3.16
LPCAT3-204ENST00000536797 CARMIL2Q6F5E8 1435 aa34.71■■■■□ 3.15
LPCAT3-204ENST00000536797 UGGT2Q9NYU1 1516 aa34.71■■■■□ 3.15
LPCAT3-204ENST00000536797 DISP1Q96F81 1524 aa34.63■■■■□ 3.13
LPCAT3-204ENST00000536797 KIAA0556O60303 1618 aa34.58■■■■□ 3.13
LPCAT3-204ENST00000536797 TNIKQ9UKE5 1360 aa34.57■■■■□ 3.12
LPCAT3-204ENST00000536797 GOLGA3Q08378 1498 aa34.56■■■■□ 3.12
LPCAT3-204ENST00000536797 PTPRGP23470 1445 aa34.54■■■■□ 3.12
LPCAT3-204ENST00000536797 EHMT2Q96KQ7 1210 aa34.5■■■■□ 3.11
LPCAT3-204ENST00000536797 TTBK1Q5TCY1 1321 aaPredicted RBP34.48■■■■□ 3.11
LPCAT3-204ENST00000536797 UBTFP17480 764 aaKnown RBP34.46■■■■□ 3.11
LPCAT3-204ENST00000536797 ADCY10Q96PN6 1610 aa34.4■■■■□ 3.1
LPCAT3-204ENST00000536797 SAMD9Q5K651 1589 aa34.38■■■■□ 3.09
LPCAT3-204ENST00000536797 RANGAP1P46060 587 aaPredicted RBP34.35■■■■□ 3.09
LPCAT3-204ENST00000536797 UACAQ9BZF9 1416 aa34.31■■■■□ 3.08
LPCAT3-204ENST00000536797 NPM1P06748 294 aaKnown RBP eCLIP34.3■■■■□ 3.08
LPCAT3-204ENST00000536797 P3H3Q8IVL6 736 aa34.3■■■■□ 3.08
LPCAT3-204ENST00000536797 UHRF1BP1LA0JNW5 1464 aa34.28■■■■□ 3.08
LPCAT3-204ENST00000536797 EFCAB5A4FU69 1503 aa34.27■■■■□ 3.08
LPCAT3-204ENST00000536797 ABCC2Q92887 1545 aa34.26■■■■□ 3.08
LPCAT3-204ENST00000536797 TRHP20396 242 aaPredicted RBP34.23■■■■□ 3.07
LPCAT3-204ENST00000536797 PLB1Q6P1J6 1458 aa34.2■■■■□ 3.07
LPCAT3-204ENST00000536797 FHOD3Q2V2M9 1422 aa34.18■■■■□ 3.06
LPCAT3-204ENST00000536797 ABCA8O94911 1581 aa34.17■■■■□ 3.06
LPCAT3-204ENST00000536797 MAPKBP1O60336 1514 aa34.17■■■■□ 3.06
LPCAT3-204ENST00000536797 KDM5BQ9UGL1 1544 aa34.11■■■■□ 3.05
LPCAT3-204ENST00000536797 ARHGAP35Q9NRY4 1499 aa34.08■■■■□ 3.05
LPCAT3-204ENST00000536797 ZCCHC11Q5TAX3 1644 aaKnown RBP34.07■■■■□ 3.04
LPCAT3-204ENST00000536797 RAPGEF6Q8TEU7 1601 aa34.04■■■■□ 3.04
LPCAT3-204ENST00000536797 ASXL2Q76L83 1435 aa33.98■■■■□ 3.03
LPCAT3-204ENST00000536797 KIF13AQ9H1H9 1805 aa33.98■■■■□ 3.03
LPCAT3-204ENST00000536797 ABCC10Q5T3U5 1492 aa33.98■■■■□ 3.03
LPCAT3-204ENST00000536797 FMN1Q68DA7 1419 aa33.95■■■■□ 3.03
LPCAT3-204ENST00000536797 DIP2BQ9P265 1576 aa33.95■■■■□ 3.03
LPCAT3-204ENST00000536797 CLIP1P30622 1438 aa33.93■■■■□ 3.02
LPCAT3-204ENST00000536797 FAM69CQ0P6D2 419 aa33.9■■■■□ 3.02
LPCAT3-204ENST00000536797 NUP153P49790 1475 aaKnown RBP33.89■■■■□ 3.02
LPCAT3-204ENST00000536797 LOC105371045A0A1W2PR82 267 aa33.88■■■■□ 3.01
LPCAT3-204ENST00000536797 ARID3CA6NKF2 412 aa33.88■■■■□ 3.01
LPCAT3-204ENST00000536797 ATP10BO94823 1461 aa33.88■■■■□ 3.01
LPCAT3-204ENST00000536797 WDR7Q9Y4E6 1490 aa33.84■■■■□ 3.01
LPCAT3-204ENST00000536797 CEP162Q5TB80 1403 aa33.81■■■■□ 3
LPCAT3-204ENST00000536797 HECW1Q76N89 1606 aa33.8■■■■□ 3
LPCAT3-204ENST00000536797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.79■■■■□ 3
LPCAT3-204ENST00000536797 HNRNPUL2Q1KMD3 747 aaKnown RBP33.79■■■■□ 3
LPCAT3-204ENST00000536797 EPRSP07814 1512 aaKnown RBP33.79■■■■□ 3
LPCAT3-204ENST00000536797 GLI2P10070 1586 aa33.78■■■■□ 3
LPCAT3-204ENST00000536797 ATP1B4Q9UN42 357 aaPredicted RBP33.74■■■□□ 2.99
LPCAT3-204ENST00000536797 PCF11O94913 1555 aaKnown RBP33.69■■■□□ 2.98
LPCAT3-204ENST00000536797 KCNH8Q96L42 1107 aa33.69■■■□□ 2.98
LPCAT3-204ENST00000536797 TSPOAP1O95153 1857 aa33.68■■■□□ 2.98
LPCAT3-204ENST00000536797 CDK13Q14004 1512 aaKnown RBP33.68■■■□□ 2.98
LPCAT3-204ENST00000536797 CASKIN1Q8WXD9 1431 aa33.67■■■□□ 2.98
LPCAT3-204ENST00000536797 MAP3K4Q9Y6R4 1608 aa33.64■■■□□ 2.98
LPCAT3-204ENST00000536797 PLEKHD1A6NEE1 506 aa33.62■■■□□ 2.97
LPCAT3-204ENST00000536797 FYCO1Q9BQS8 1478 aa33.62■■■□□ 2.97
LPCAT3-204ENST00000536797 LRRIQ1Q96JM4 1722 aa33.6■■■□□ 2.97
LPCAT3-204ENST00000536797 CFAP43Q8NDM7 1665 aa33.59■■■□□ 2.97
LPCAT3-204ENST00000536797 CCDC18Q5T9S5 1454 aa33.56■■■□□ 2.96
LPCAT3-204ENST00000536797 PPRC1Q5VV67 1664 aaKnown RBP33.55■■■□□ 2.96
LPCAT3-204ENST00000536797 CDK11AQ9UQ88 783 aaPredicted RBP33.53■■■□□ 2.96
LPCAT3-204ENST00000536797 ABCA9Q8IUA7 1624 aa33.51■■■□□ 2.96
LPCAT3-204ENST00000536797 CD109Q6YHK3 1445 aa33.51■■■□□ 2.96
LPCAT3-204ENST00000536797 TEX14Q8IWB6 1497 aa33.49■■■□□ 2.95
LPCAT3-204ENST00000536797 MAGI3Q5TCQ9 1506 aa33.45■■■□□ 2.94
LPCAT3-204ENST00000536797 TROQ12816 1431 aaPredicted RBP33.41■■■□□ 2.94
LPCAT3-204ENST00000536797 VPS8Q8N3P4 1428 aa33.4■■■□□ 2.94
LPCAT3-204ENST00000536797 KDM6BO15054 1643 aa33.4■■■□□ 2.94
LPCAT3-204ENST00000536797 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.39■■■□□ 2.94
LPCAT3-204ENST00000536797 KIF14Q15058 1648 aa33.36■■■□□ 2.93
LPCAT3-204ENST00000536797 TTC37Q6PGP7 1564 aa33.35■■■□□ 2.93
LPCAT3-204ENST00000536797 MYO5CQ9NQX4 1742 aa33.23■■■□□ 2.91
LPCAT3-204ENST00000536797 NEO1Q92859 1461 aa33.22■■■□□ 2.91
LPCAT3-204ENST00000536797 MTUS2Q5JR59 1369 aa33.21■■■□□ 2.91
LPCAT3-204ENST00000536797 PHLDB1Q86UU1 1377 aa33.2■■■□□ 2.91
LPCAT3-204ENST00000536797 CFAP74Q9C0B2 1584 aa33.2■■■□□ 2.9
LPCAT3-204ENST00000536797 COL17A1Q9UMD9 1497 aaPredicted RBP33.2■■■□□ 2.9
LPCAT3-204ENST00000536797 PLCH2O75038 1416 aa33.19■■■□□ 2.9
LPCAT3-204ENST00000536797 TIAM1Q13009 1591 aa33.18■■■□□ 2.9
LPCAT3-204ENST00000536797 FANCAO15360 1455 aa33.17■■■□□ 2.9
LPCAT3-204ENST00000536797 EHBP1L1Q8N3D4 1523 aa33.17■■■□□ 2.9
LPCAT3-204ENST00000536797 ARAP3Q8WWN8 1544 aa33.15■■■□□ 2.9
LPCAT3-204ENST00000536797 AKNAQ7Z591 1439 aa33.09■■■□□ 2.89
LPCAT3-204ENST00000536797 MAP3K1Q13233 1512 aa33.09■■■□□ 2.89
LPCAT3-204ENST00000536797 PREX2Q70Z35 1606 aa33.08■■■□□ 2.89
LPCAT3-204ENST00000536797 ARHGAP5Q13017 1502 aa33.08■■■□□ 2.89
LPCAT3-204ENST00000536797 EFCAB2Q5VUJ9 269 aa33.06■■■□□ 2.88
LPCAT3-204ENST00000536797 CDC42BPAQ5VT25 1732 aa33.06■■■□□ 2.88
LPCAT3-204ENST00000536797 CDC42BPBQ9Y5S2 1711 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms