RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 RANGAP1P46060 587 aaPredicted RBP20.57■□□□□ 0.88
CDK5RAP3-202ENST00000536708 PCGF6Q9BYE7 350 aa20.56■□□□□ 0.88
CDK5RAP3-202ENST00000536708 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
CDK5RAP3-202ENST00000536708 CLIP1P30622 1438 aa20.51■□□□□ 0.87
CDK5RAP3-202ENST00000536708 FBLN2P98095 1184 aa20.49■□□□□ 0.87
CDK5RAP3-202ENST00000536708 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
CDK5RAP3-202ENST00000536708 IQGAP2Q13576 1575 aa20.45■□□□□ 0.87
CDK5RAP3-202ENST00000536708 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
CDK5RAP3-202ENST00000536708 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
CDK5RAP3-202ENST00000536708 NUP160Q12769 1436 aa20.4■□□□□ 0.86
CDK5RAP3-202ENST00000536708 TRIM26Q12899 539 aaPredicted RBP20.39■□□□□ 0.85
CDK5RAP3-202ENST00000536708 SAMD9Q5K651 1589 aa20.37■□□□□ 0.85
CDK5RAP3-202ENST00000536708 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
CDK5RAP3-202ENST00000536708 EFCAB5A4FU69 1503 aa20.34■□□□□ 0.85
CDK5RAP3-202ENST00000536708 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
CDK5RAP3-202ENST00000536708 UGGT2Q9NYU1 1516 aa20.3■□□□□ 0.84
CDK5RAP3-202ENST00000536708 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
CDK5RAP3-202ENST00000536708 VPS8Q8N3P4 1428 aa20.29■□□□□ 0.84
CDK5RAP3-202ENST00000536708 KIAA0556O60303 1618 aa20.27■□□□□ 0.84
CDK5RAP3-202ENST00000536708 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
CDK5RAP3-202ENST00000536708 DISP1Q96F81 1524 aa20.25■□□□□ 0.83
CDK5RAP3-202ENST00000536708 PCF11O94913 1555 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-202ENST00000536708 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
CDK5RAP3-202ENST00000536708 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
CDK5RAP3-202ENST00000536708 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
CDK5RAP3-202ENST00000536708 JPH4Q96JJ6 628 aa20.15■□□□□ 0.82
CDK5RAP3-202ENST00000536708 PPARGC1BQ86YN6 1023 aaKnown RBP20.14■□□□□ 0.81
CDK5RAP3-202ENST00000536708 PRG4Q92954 1404 aaPredicted RBP20.13■□□□□ 0.81
CDK5RAP3-202ENST00000536708 TTBK1Q5TCY1 1321 aaPredicted RBP20.11■□□□□ 0.81
CDK5RAP3-202ENST00000536708 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
CDK5RAP3-202ENST00000536708 FYCO1Q9BQS8 1478 aa20.08■□□□□ 0.8
CDK5RAP3-202ENST00000536708 CARMIL2Q6F5E8 1435 aa20.08■□□□□ 0.8
CDK5RAP3-202ENST00000536708 CFAP43Q8NDM7 1665 aa20.07■□□□□ 0.8
CDK5RAP3-202ENST00000536708 CASKIN1Q8WXD9 1431 aa20.05■□□□□ 0.8
CDK5RAP3-202ENST00000536708 TIAM1Q13009 1591 aa20.04■□□□□ 0.8
CDK5RAP3-202ENST00000536708 RAPGEF6Q8TEU7 1601 aa20.03■□□□□ 0.8
CDK5RAP3-202ENST00000536708 HECW1Q76N89 1606 aa20.02■□□□□ 0.8
CDK5RAP3-202ENST00000536708 OSCARQ8IYS5 282 aa20.02■□□□□ 0.8
CDK5RAP3-202ENST00000536708 PLB1Q6P1J6 1458 aa20.01■□□□□ 0.79
CDK5RAP3-202ENST00000536708 ATP1B4Q9UN42 357 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-202ENST00000536708 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
CDK5RAP3-202ENST00000536708 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
CDK5RAP3-202ENST00000536708 ABCA8O94911 1581 aa19.96■□□□□ 0.79
CDK5RAP3-202ENST00000536708 NUP153P49790 1475 aaKnown RBP19.96■□□□□ 0.79
CDK5RAP3-202ENST00000536708 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
CDK5RAP3-202ENST00000536708 APLP2Q06481 763 aa19.94■□□□□ 0.78
CDK5RAP3-202ENST00000536708 KANK4Q5T7N3 995 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-202ENST00000536708 PTPRGP23470 1445 aa19.92■□□□□ 0.78
CDK5RAP3-202ENST00000536708 EPRSP07814 1512 aaKnown RBP19.92■□□□□ 0.78
CDK5RAP3-202ENST00000536708 MAP3K1Q13233 1512 aa19.92■□□□□ 0.78
CDK5RAP3-202ENST00000536708 MAGI3Q5TCQ9 1506 aa19.89■□□□□ 0.78
CDK5RAP3-202ENST00000536708 CCDC18Q5T9S5 1454 aa19.88■□□□□ 0.77
CDK5RAP3-202ENST00000536708 LRRC9Q6ZRR7 1453 aa19.88■□□□□ 0.77
CDK5RAP3-202ENST00000536708 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
CDK5RAP3-202ENST00000536708 ABCC2Q92887 1545 aa19.84■□□□□ 0.77
CDK5RAP3-202ENST00000536708 UACAQ9BZF9 1416 aa19.82■□□□□ 0.76
CDK5RAP3-202ENST00000536708 ADCY10Q96PN6 1610 aa19.82■□□□□ 0.76
CDK5RAP3-202ENST00000536708 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
CDK5RAP3-202ENST00000536708 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
CDK5RAP3-202ENST00000536708 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
CDK5RAP3-202ENST00000536708 EHBP1L1Q8N3D4 1523 aa19.81■□□□□ 0.76
CDK5RAP3-202ENST00000536708 ZCCHC11Q5TAX3 1644 aaKnown RBP19.77■□□□□ 0.76
CDK5RAP3-202ENST00000536708 MTUS2Q5JR59 1369 aa19.77■□□□□ 0.76
CDK5RAP3-202ENST00000536708 ATP10BO94823 1461 aa19.77■□□□□ 0.76
CDK5RAP3-202ENST00000536708 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
CDK5RAP3-202ENST00000536708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.74■□□□□ 0.75
CDK5RAP3-202ENST00000536708 HNRNPUL2Q1KMD3 747 aaKnown RBP19.74■□□□□ 0.75
CDK5RAP3-202ENST00000536708 KIF14Q15058 1648 aa19.74■□□□□ 0.75
CDK5RAP3-202ENST00000536708 UHRF1BP1LA0JNW5 1464 aa19.73■□□□□ 0.75
CDK5RAP3-202ENST00000536708 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
CDK5RAP3-202ENST00000536708 NCOA2Q15596 1464 aa19.71■□□□□ 0.75
CDK5RAP3-202ENST00000536708 KDM5BQ9UGL1 1544 aa19.69■□□□□ 0.74
CDK5RAP3-202ENST00000536708 TROQ12816 1431 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-202ENST00000536708 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
CDK5RAP3-202ENST00000536708 CDK11AQ9UQ88 783 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-202ENST00000536708 CDC42BPAQ5VT25 1732 aa19.6■□□□□ 0.73
CDK5RAP3-202ENST00000536708 TTC37Q6PGP7 1564 aa19.59■□□□□ 0.73
CDK5RAP3-202ENST00000536708 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
CDK5RAP3-202ENST00000536708 CYB5RLQ6IPT4 315 aa19.57■□□□□ 0.72
CDK5RAP3-202ENST00000536708 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
CDK5RAP3-202ENST00000536708 ITSN2Q9NZM3 1697 aa19.57■□□□□ 0.72
CDK5RAP3-202ENST00000536708 PLEKHD1A6NEE1 506 aa19.57■□□□□ 0.72
CDK5RAP3-202ENST00000536708 CCNB3Q8WWL7 1395 aa19.56■□□□□ 0.72
CDK5RAP3-202ENST00000536708 ABCC10Q5T3U5 1492 aa19.55■□□□□ 0.72
CDK5RAP3-202ENST00000536708 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
CDK5RAP3-202ENST00000536708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.53■□□□□ 0.723e-9■■□□□ 12.3
CDK5RAP3-202ENST00000536708 WDR7Q9Y4E6 1490 aa19.53■□□□□ 0.72
CDK5RAP3-202ENST00000536708 ASXL2Q76L83 1435 aa19.51■□□□□ 0.71
CDK5RAP3-202ENST00000536708 CDC42BPBQ9Y5S2 1711 aa19.51■□□□□ 0.71
CDK5RAP3-202ENST00000536708 MYO5CQ9NQX4 1742 aa19.51■□□□□ 0.71
CDK5RAP3-202ENST00000536708 PREX2Q70Z35 1606 aa19.51■□□□□ 0.71
CDK5RAP3-202ENST00000536708 GPATCH8Q9UKJ3 1502 aaKnown RBP19.5■□□□□ 0.71
CDK5RAP3-202ENST00000536708 KCNH8Q96L42 1107 aa19.48■□□□□ 0.71
CDK5RAP3-202ENST00000536708 FAM50AQ14320 339 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP3-202ENST00000536708 ITGAEP38570 1179 aa19.44■□□□□ 0.7
CDK5RAP3-202ENST00000536708 TCOF1Q13428 1488 aaKnown RBP19.44■□□□□ 0.7
CDK5RAP3-202ENST00000536708 ABCA9Q8IUA7 1624 aa19.44■□□□□ 0.7
CDK5RAP3-202ENST00000536708 MIA2Q96PC5 1412 aa19.43■□□□□ 0.7
CDK5RAP3-202ENST00000536708 CAMSAP2Q08AD1 1489 aa19.43■□□□□ 0.7
CDK5RAP3-202ENST00000536708 MAPKBP1O60336 1514 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms