RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 PRG4Q92954 1404 aaPredicted RBP25.76■■□□□ 1.71
UBC-204ENST00000536661 JPH4Q96JJ6 628 aa25.72■■□□□ 1.71
UBC-204ENST00000536661 CARMIL1Q5VZK9 1371 aa25.71■■□□□ 1.71
UBC-204ENST00000536661 KIAA0586Q9BVV6 1533 aa25.71■■□□□ 1.71
UBC-204ENST00000536661 IQGAP2Q13576 1575 aa25.57■■□□□ 1.68
UBC-204ENST00000536661 RAPGEF2Q9Y4G8 1499 aa25.55■■□□□ 1.68
UBC-204ENST00000536661 ADCY10Q96PN6 1610 aa25.5■■□□□ 1.67
UBC-204ENST00000536661 CTTNBP2Q8WZ74 1663 aa25.46■■□□□ 1.67
UBC-204ENST00000536661 KIF13AQ9H1H9 1805 aa25.44■■□□□ 1.66
UBC-204ENST00000536661 CARMIL2Q6F5E8 1435 aa25.42■■□□□ 1.66
UBC-204ENST00000536661 UGGT2Q9NYU1 1516 aa25.4■■□□□ 1.66
UBC-204ENST00000536661 DISP1Q96F81 1524 aa25.39■■□□□ 1.66
UBC-204ENST00000536661 PRXQ9BXM0 1461 aa25.39■■□□□ 1.65
UBC-204ENST00000536661 PTPRGP23470 1445 aa25.37■■□□□ 1.65
UBC-204ENST00000536661 MAPKBP1O60336 1514 aa25.37■■□□□ 1.65
UBC-204ENST00000536661 TNIKQ9UKE5 1360 aa25.37■■□□□ 1.65
UBC-204ENST00000536661 KIAA0556O60303 1618 aa25.35■■□□□ 1.65
UBC-204ENST00000536661 TTBK1Q5TCY1 1321 aaPredicted RBP25.32■■□□□ 1.64
UBC-204ENST00000536661 NPM1P06748 294 aaKnown RBP eCLIP25.3■■□□□ 1.64
UBC-204ENST00000536661 DIP2BQ9P265 1576 aa25.29■■□□□ 1.64
UBC-204ENST00000536661 ABCC10Q5T3U5 1492 aa25.28■■□□□ 1.64
UBC-204ENST00000536661 ABCC2Q92887 1545 aa25.24■■□□□ 1.63
UBC-204ENST00000536661 UHRF1BP1LA0JNW5 1464 aa25.23■■□□□ 1.63
UBC-204ENST00000536661 FAM69CQ0P6D2 419 aa25.23■■□□□ 1.63
UBC-204ENST00000536661 UACAQ9BZF9 1416 aa25.21■■□□□ 1.63
UBC-204ENST00000536661 EEA1Q15075 1411 aa25.2■■□□□ 1.63
UBC-204ENST00000536661 CSRNP3Q8WYN3 585 aa25.2■■□□□ 1.62
UBC-204ENST00000536661 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
UBC-204ENST00000536661 ZCCHC11Q5TAX3 1644 aaKnown RBP25.14■■□□□ 1.61
UBC-204ENST00000536661 TSPOAP1O95153 1857 aa25.13■■□□□ 1.61
UBC-204ENST00000536661 KDM5BQ9UGL1 1544 aa25.12■■□□□ 1.61
UBC-204ENST00000536661 ASXL2Q76L83 1435 aa25.11■■□□□ 1.61
UBC-204ENST00000536661 PLB1Q6P1J6 1458 aa25.09■■□□□ 1.61
UBC-204ENST00000536661 ABCA8O94911 1581 aa25.08■■□□□ 1.61
UBC-204ENST00000536661 KIF21BO75037 1637 aa25.07■■□□□ 1.6
UBC-204ENST00000536661 SAMD9Q5K651 1589 aa25.06■■□□□ 1.6
UBC-204ENST00000536661 FAM9AQ8IZU1 332 aaPredicted RBP25.06■■□□□ 1.6
UBC-204ENST00000536661 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
UBC-204ENST00000536661 GLI2P10070 1586 aa25.04■■□□□ 1.6
UBC-204ENST00000536661 PPRC1Q5VV67 1664 aaKnown RBP25.01■■□□□ 1.59
UBC-204ENST00000536661 EPRSP07814 1512 aaKnown RBP24.97■■□□□ 1.59
UBC-204ENST00000536661 KDM6BO15054 1643 aa24.97■■□□□ 1.59
UBC-204ENST00000536661 P3H3Q8IVL6 736 aa24.96■■□□□ 1.59
UBC-204ENST00000536661 MAP3K4Q9Y6R4 1608 aa24.96■■□□□ 1.59
UBC-204ENST00000536661 WDR7Q9Y4E6 1490 aa24.94■■□□□ 1.58
UBC-204ENST00000536661 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
UBC-204ENST00000536661 RAPGEF6Q8TEU7 1601 aa24.9■■□□□ 1.58
UBC-204ENST00000536661 RANGAP1P46060 587 aaPredicted RBP24.85■■□□□ 1.57
UBC-204ENST00000536661 EFCAB5A4FU69 1503 aa24.85■■□□□ 1.57
UBC-204ENST00000536661 FHOD3Q2V2M9 1422 aa24.85■■□□□ 1.57
UBC-204ENST00000536661 CFAP43Q8NDM7 1665 aa24.83■■□□□ 1.57
UBC-204ENST00000536661 ATP10BO94823 1461 aa24.83■■□□□ 1.56
UBC-204ENST00000536661 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
UBC-204ENST00000536661 TEX14Q8IWB6 1497 aa24.78■■□□□ 1.56
UBC-204ENST00000536661 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
UBC-204ENST00000536661 NUP153P49790 1475 aaKnown RBP24.77■■□□□ 1.56
UBC-204ENST00000536661 COL17A1Q9UMD9 1497 aaPredicted RBP24.77■■□□□ 1.56
UBC-204ENST00000536661 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
UBC-204ENST00000536661 KCNH8Q96L42 1107 aa24.73■■□□□ 1.55
UBC-204ENST00000536661 CD109Q6YHK3 1445 aa24.71■■□□□ 1.55
UBC-204ENST00000536661 MAGI3Q5TCQ9 1506 aa24.71■■□□□ 1.55
UBC-204ENST00000536661 ABCA9Q8IUA7 1624 aa24.69■■□□□ 1.54
UBC-204ENST00000536661 KDM4FA0A1W2PPD8 638 aa24.69■■□□□ 1.54
UBC-204ENST00000536661 ARHGAP35Q9NRY4 1499 aa24.66■■□□□ 1.54
UBC-204ENST00000536661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.62■■□□□ 1.53
UBC-204ENST00000536661 HNRNPUL2Q1KMD3 747 aaKnown RBP24.62■■□□□ 1.53
UBC-204ENST00000536661 HECW1Q76N89 1606 aa24.57■■□□□ 1.52
UBC-204ENST00000536661 CDK13Q14004 1512 aaKnown RBP24.57■■□□□ 1.52
UBC-204ENST00000536661 FMN1Q68DA7 1419 aa24.57■■□□□ 1.52
UBC-204ENST00000536661 LRRIQ1Q96JM4 1722 aa24.52■■□□□ 1.52
UBC-204ENST00000536661 ARAP3Q8WWN8 1544 aa24.51■■□□□ 1.51
UBC-204ENST00000536661 TTC37Q6PGP7 1564 aa24.5■■□□□ 1.51
UBC-204ENST00000536661 PLEKHD1A6NEE1 506 aa24.49■■□□□ 1.51
UBC-204ENST00000536661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.49■■□□□ 1.512e-10■□□□□ 10.5
UBC-204ENST00000536661 ADGRL1O94910 1474 aa24.47■■□□□ 1.51
UBC-204ENST00000536661 NEO1Q92859 1461 aa24.46■■□□□ 1.51
UBC-204ENST00000536661 PCF11O94913 1555 aaKnown RBP24.45■■□□□ 1.5
UBC-204ENST00000536661 PHLDB1Q86UU1 1377 aa24.43■■□□□ 1.5
UBC-204ENST00000536661 ATP1B4Q9UN42 357 aaPredicted RBP24.43■■□□□ 1.5
UBC-204ENST00000536661 CFAP74Q9C0B2 1584 aa24.42■■□□□ 1.5
UBC-204ENST00000536661 FRMPD1Q5SYB0 1578 aa24.41■■□□□ 1.5
UBC-204ENST00000536661 KIF14Q15058 1648 aa24.38■■□□□ 1.49
UBC-204ENST00000536661 MYO5CQ9NQX4 1742 aa24.36■■□□□ 1.49
UBC-204ENST00000536661 FANCAO15360 1455 aa24.36■■□□□ 1.49
UBC-204ENST00000536661 CLIP1P30622 1438 aa24.35■■□□□ 1.49
UBC-204ENST00000536661 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
UBC-204ENST00000536661 RICTORQ6R327 1708 aa24.35■■□□□ 1.49
UBC-204ENST00000536661 RAPGEF3O95398 923 aa24.32■■□□□ 1.48
UBC-204ENST00000536661 TROQ12816 1431 aaPredicted RBP24.32■■□□□ 1.48
UBC-204ENST00000536661 AKNAQ7Z591 1439 aa24.32■■□□□ 1.48
UBC-204ENST00000536661 CCDC18Q5T9S5 1454 aa24.32■■□□□ 1.48
UBC-204ENST00000536661 CDK11AQ9UQ88 783 aaPredicted RBP24.3■■□□□ 1.48
UBC-204ENST00000536661 FYCO1Q9BQS8 1478 aa24.3■■□□□ 1.48
UBC-204ENST00000536661 PLCH2O75038 1416 aa24.28■■□□□ 1.48
UBC-204ENST00000536661 DENND4BO75064 1496 aaPredicted RBP24.28■■□□□ 1.48
UBC-204ENST00000536661 ARHGEF40Q8TER5 1519 aa24.25■■□□□ 1.47
UBC-204ENST00000536661 ZMYM4Q5VZL5 1548 aa24.24■■□□□ 1.47
UBC-204ENST00000536661 CDC42BPBQ9Y5S2 1711 aa24.21■■□□□ 1.47
UBC-204ENST00000536661 PREX2Q70Z35 1606 aa24.19■■□□□ 1.46
UBC-204ENST00000536661 ARHGAP5Q13017 1502 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms