RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 AQRO60306 1485 aaKnown RBP eCLIP34.96■■■■□ 3.193e-8■■□□□ 13.1
HMGA2-206ENST00000536545 ADAMTS12P58397 1594 aa34.96■■■■□ 3.19
HMGA2-206ENST00000536545 GRIN2BQ13224 1484 aa34.93■■■■□ 3.18
HMGA2-206ENST00000536545 ZNF608Q9ULD9 1512 aaPredicted RBP34.91■■■■□ 3.18
HMGA2-206ENST00000536545 FHAD1B1AJZ9 1412 aa34.9■■■■□ 3.18
HMGA2-206ENST00000536545 EIF4G3O43432 1585 aaKnown RBP34.83■■■■□ 3.17
HMGA2-206ENST00000536545 SAMD9Q5K651 1589 aa34.8■■■■□ 3.16
HMGA2-206ENST00000536545 MAP3K1Q13233 1512 aa34.8■■■■□ 3.16
HMGA2-206ENST00000536545 PCF11O94913 1555 aaKnown RBP34.77■■■■□ 3.16
HMGA2-206ENST00000536545 FHOD3Q2V2M9 1422 aa34.77■■■■□ 3.16
HMGA2-206ENST00000536545 TIAM1Q13009 1591 aa34.74■■■■□ 3.15
HMGA2-206ENST00000536545 KANK4Q5T7N3 995 aaPredicted RBP34.72■■■■□ 3.15
HMGA2-206ENST00000536545 CFAP43Q8NDM7 1665 aa34.69■■■■□ 3.14
HMGA2-206ENST00000536545 ZEB1P37275 1124 aaPredicted RBP34.68■■■■□ 3.14
HMGA2-206ENST00000536545 SNAPC4Q5SXM2 1469 aa34.68■■■■□ 3.14
HMGA2-206ENST00000536545 FYCO1Q9BQS8 1478 aa34.67■■■■□ 3.14
HMGA2-206ENST00000536545 P3H3Q8IVL6 736 aa34.64■■■■□ 3.14
HMGA2-206ENST00000536545 IQGAP2Q13576 1575 aa34.63■■■■□ 3.13
HMGA2-206ENST00000536545 CASKIN1Q8WXD9 1431 aa34.63■■■■□ 3.13
HMGA2-206ENST00000536545 FMN1Q68DA7 1419 aa34.61■■■■□ 3.13
HMGA2-206ENST00000536545 MAGI1Q96QZ7 1491 aaPredicted RBP34.59■■■■□ 3.13
HMGA2-206ENST00000536545 LRRC9Q6ZRR7 1453 aa34.55■■■■□ 3.12
HMGA2-206ENST00000536545 GRIN2AQ12879 1464 aa34.54■■■■□ 3.12
HMGA2-206ENST00000536545 RRBP1Q9P2E9 1410 aaKnown RBP34.53■■■■□ 3.12
HMGA2-206ENST00000536545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.48■■■■□ 3.11
HMGA2-206ENST00000536545 UGGT2Q9NYU1 1516 aa34.48■■■■□ 3.11
HMGA2-206ENST00000536545 SYNJ2O15056 1496 aa34.45■■■■□ 3.11
HMGA2-206ENST00000536545 KIAA0586Q9BVV6 1533 aa34.45■■■■□ 3.11
HMGA2-206ENST00000536545 HNRNPUL2Q1KMD3 747 aaKnown RBP34.39■■■■□ 3.1
HMGA2-206ENST00000536545 CCER1Q8TC90 406 aaPredicted RBP34.39■■■■□ 3.1
HMGA2-206ENST00000536545 LRRIQ1Q96JM4 1722 aa34.37■■■■□ 3.09
HMGA2-206ENST00000536545 CCNB3Q8WWL7 1395 aa34.35■■■■□ 3.09
HMGA2-206ENST00000536545 CEP170Q5SW79 1584 aa34.34■■■■□ 3.09
HMGA2-206ENST00000536545 KIAA0556O60303 1618 aa34.3■■■■□ 3.08
HMGA2-206ENST00000536545 ATP1B4Q9UN42 357 aaPredicted RBP34.29■■■■□ 3.08
HMGA2-206ENST00000536545 DISP1Q96F81 1524 aa34.27■■■■□ 3.08
HMGA2-206ENST00000536545 PHLDB1Q86UU1 1377 aa34.27■■■■□ 3.08
HMGA2-206ENST00000536545 NUP160Q12769 1436 aa34.27■■■■□ 3.08
HMGA2-206ENST00000536545 HECW1Q76N89 1606 aa34.25■■■■□ 3.07
HMGA2-206ENST00000536545 CHMP7Q8WUX9 453 aaPredicted RBP34.24■■■■□ 3.07
HMGA2-206ENST00000536545 CCDC18Q5T9S5 1454 aa34.21■■■■□ 3.07
HMGA2-206ENST00000536545 EHBP1L1Q8N3D4 1523 aa34.15■■■■□ 3.06
HMGA2-206ENST00000536545 MTUS2Q5JR59 1369 aa34.12■■■■□ 3.05
HMGA2-206ENST00000536545 EPRSP07814 1512 aaKnown RBP34.09■■■■□ 3.05
HMGA2-206ENST00000536545 FBLN2P98095 1184 aa34.08■■■■□ 3.05
HMGA2-206ENST00000536545 MAGI3Q5TCQ9 1506 aa34.07■■■■□ 3.04
HMGA2-206ENST00000536545 SUPT6HQ7KZ85 1726 aaKnown RBP34.05■■■■□ 3.04
HMGA2-206ENST00000536545 NCOA2Q15596 1464 aa34.02■■■■□ 3.04
HMGA2-206ENST00000536545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.02■■■■□ 3.04
HMGA2-206ENST00000536545 ARHGEF11O15085 1522 aa34.02■■■■□ 3.04
HMGA2-206ENST00000536545 RAPGEF6Q8TEU7 1601 aa34.01■■■■□ 3.03
HMGA2-206ENST00000536545 CDK13Q14004 1512 aaKnown RBP34■■■■□ 3.03
HMGA2-206ENST00000536545 FGD6Q6ZV73 1430 aa33.99■■■■□ 3.03
HMGA2-206ENST00000536545 CHD1O14646 1710 aa33.96■■■■□ 3.03
HMGA2-206ENST00000536545 NUP153P49790 1475 aaKnown RBP33.95■■■■□ 3.03
HMGA2-206ENST00000536545 CARMIL2Q6F5E8 1435 aa33.94■■■■□ 3.02
HMGA2-206ENST00000536545 MYOM3Q5VTT5 1437 aa33.92■■■■□ 3.02
HMGA2-206ENST00000536545 JPH4Q96JJ6 628 aa33.91■■■■□ 3.02
HMGA2-206ENST00000536545 FAM50AQ14320 339 aaKnown RBP33.88■■■■□ 3.01
HMGA2-206ENST00000536545 DHX57Q6P158 1386 aaKnown RBP33.87■■■■□ 3.01
HMGA2-206ENST00000536545 ITGAEP38570 1179 aa33.87■■■■□ 3.01
HMGA2-206ENST00000536545 PLB1Q6P1J6 1458 aa33.81■■■■□ 3
HMGA2-206ENST00000536545 CLSPNQ9HAW4 1339 aa33.79■■■■□ 3
HMGA2-206ENST00000536545 RAB3GAP2Q9H2M9 1393 aa33.78■■■■□ 3
HMGA2-206ENST00000536545 PTPN23Q9H3S7 1636 aa33.78■■■■□ 3
HMGA2-206ENST00000536545 SETD5Q9C0A6 1442 aa33.77■■■■□ 3
HMGA2-206ENST00000536545 ABCA8O94911 1581 aa33.76■■■■□ 3
HMGA2-206ENST00000536545 SHROOM2Q13796 1616 aa33.76■■■□□ 2.99
HMGA2-206ENST00000536545 TCOF1Q13428 1488 aaKnown RBP33.75■■■□□ 2.99
HMGA2-206ENST00000536545 ARID3CA6NKF2 412 aa33.72■■■□□ 2.99
HMGA2-206ENST00000536545 PRG4Q92954 1404 aaPredicted RBP33.72■■■□□ 2.99
HMGA2-206ENST00000536545 MIA2Q96PC5 1412 aa33.67■■■□□ 2.98
HMGA2-206ENST00000536545 PTPRKQ15262 1439 aa33.65■■■□□ 2.98
HMGA2-206ENST00000536545 TROQ12816 1431 aaPredicted RBP33.63■■■□□ 2.97
HMGA2-206ENST00000536545 ADCY10Q96PN6 1610 aa33.62■■■□□ 2.97
HMGA2-206ENST00000536545 CDK11AQ9UQ88 783 aaPredicted RBP33.6■■■□□ 2.97
HMGA2-206ENST00000536545 CLASP1Q7Z460 1538 aa33.59■■■□□ 2.97
HMGA2-206ENST00000536545 HFM1A2PYH4 1435 aa33.57■■■□□ 2.96
HMGA2-206ENST00000536545 MAPKBP1O60336 1514 aa33.55■■■□□ 2.96
HMGA2-206ENST00000536545 PTPRGP23470 1445 aa33.54■■■□□ 2.96
HMGA2-206ENST00000536545 ATP10BO94823 1461 aa33.51■■■□□ 2.96
HMGA2-206ENST00000536545 KIF14Q15058 1648 aa33.51■■■□□ 2.95
HMGA2-206ENST00000536545 ERCC6L2Q5T890 1561 aa33.48■■■□□ 2.95
HMGA2-206ENST00000536545 ITSN2Q9NZM3 1697 aa33.47■■■□□ 2.95
HMGA2-206ENST00000536545 NAIPQ13075 1403 aa33.46■■■□□ 2.95
HMGA2-206ENST00000536545 AKNAQ7Z591 1439 aa33.45■■■□□ 2.95
HMGA2-206ENST00000536545 GCC2Q8IWJ2 1684 aa33.43■■■□□ 2.94
HMGA2-206ENST00000536545 DNMT1P26358 1616 aaKnown RBP33.4■■■□□ 2.94
HMGA2-206ENST00000536545 UACAQ9BZF9 1416 aa33.39■■■□□ 2.94
HMGA2-206ENST00000536545 GPATCH8Q9UKJ3 1502 aaKnown RBP33.38■■■□□ 2.93
HMGA2-206ENST00000536545 ABCC10Q5T3U5 1492 aa33.36■■■□□ 2.93
HMGA2-206ENST00000536545 DAPK1P53355 1430 aa33.34■■■□□ 2.93
HMGA2-206ENST00000536545 ABCC2Q92887 1545 aa33.33■■■□□ 2.93
HMGA2-206ENST00000536545 CAMSAP2Q08AD1 1489 aa33.32■■■□□ 2.92
HMGA2-206ENST00000536545 PLEKHD1A6NEE1 506 aa33.31■■■□□ 2.92
HMGA2-206ENST00000536545 ABCC5O15440 1437 aa33.29■■■□□ 2.92
HMGA2-206ENST00000536545 CDC42BPAQ5VT25 1732 aa33.29■■■□□ 2.92
HMGA2-206ENST00000536545 ROCK1Q13464 1354 aa33.26■■■□□ 2.91
HMGA2-206ENST00000536545 ZNF644Q9H582 1327 aaPredicted RBP33.25■■■□□ 2.91
HMGA2-206ENST00000536545 ZNF316A6NFI3 1004 aaPredicted RBP33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms