RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 AQRO60306 1485 aaKnown RBP eCLIP32.33■■■□□ 2.776e-6■■■■□ 25.1
TRIM3-214ENST00000536344 TARBP1Q13395 1621 aaKnown RBP32.27■■■□□ 2.76
TRIM3-214ENST00000536344 CENPBP07199 599 aaPredicted RBP32.27■■■□□ 2.76
TRIM3-214ENST00000536344 ABCA5Q8WWZ7 1642 aa32.25■■■□□ 2.75
TRIM3-214ENST00000536344 DIEXFQ68CQ4 756 aaKnown RBP32.25■■■□□ 2.75
TRIM3-214ENST00000536344 KANK4Q5T7N3 995 aaPredicted RBP32.25■■■□□ 2.75
TRIM3-214ENST00000536344 ATP1B4Q9UN42 357 aaPredicted RBP32.22■■■□□ 2.75
TRIM3-214ENST00000536344 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.75
TRIM3-214ENST00000536344 HNRNPUL2Q1KMD3 747 aaKnown RBP32.17■■■□□ 2.74
TRIM3-214ENST00000536344 CUL7Q14999 1698 aa32.16■■■□□ 2.74
TRIM3-214ENST00000536344 CCER1Q8TC90 406 aaPredicted RBP32.16■■■□□ 2.74
TRIM3-214ENST00000536344 FHOD3Q2V2M9 1422 aa32.1■■■□□ 2.73
TRIM3-214ENST00000536344 WDR62O43379 1518 aa32.09■■■□□ 2.73
TRIM3-214ENST00000536344 PBRM1Q86U86 1689 aa32.01■■■□□ 2.72
TRIM3-214ENST00000536344 IFT140Q96RY7 1462 aa31.99■■■□□ 2.71
TRIM3-214ENST00000536344 CTTNBP2Q8WZ74 1663 aa31.98■■■□□ 2.71
TRIM3-214ENST00000536344 THOC2Q8NI27 1593 aaKnown RBP31.96■■■□□ 2.71
TRIM3-214ENST00000536344 YTHDC1Q96MU7 727 aaKnown RBP31.95■■■□□ 2.7
TRIM3-214ENST00000536344 GRIN2BQ13224 1484 aa31.93■■■□□ 2.7
TRIM3-214ENST00000536344 FBLN2P98095 1184 aa31.92■■■□□ 2.7
TRIM3-214ENST00000536344 FHAD1B1AJZ9 1412 aa31.89■■■□□ 2.7
TRIM3-214ENST00000536344 EIF4G3O43432 1585 aaKnown RBP31.85■■■□□ 2.69
TRIM3-214ENST00000536344 PCF11O94913 1555 aaKnown RBP31.85■■■□□ 2.69
TRIM3-214ENST00000536344 ADAMTS12P58397 1594 aa31.84■■■□□ 2.69
TRIM3-214ENST00000536344 SNAPC4Q5SXM2 1469 aa31.84■■■□□ 2.69
TRIM3-214ENST00000536344 ITGAEP38570 1179 aa31.83■■■□□ 2.69
TRIM3-214ENST00000536344 ARID3CA6NKF2 412 aa31.77■■■□□ 2.68
TRIM3-214ENST00000536344 EFCAB5A4FU69 1503 aa31.75■■■□□ 2.67
TRIM3-214ENST00000536344 TIAM1Q13009 1591 aa31.75■■■□□ 2.67
TRIM3-214ENST00000536344 CHMP7Q8WUX9 453 aaPredicted RBP31.74■■■□□ 2.67
TRIM3-214ENST00000536344 LRRC9Q6ZRR7 1453 aa31.66■■■□□ 2.66
TRIM3-214ENST00000536344 IQGAP2Q13576 1575 aa31.65■■■□□ 2.66
TRIM3-214ENST00000536344 SAMD9Q5K651 1589 aa31.65■■■□□ 2.66
TRIM3-214ENST00000536344 FMN1Q68DA7 1419 aa31.64■■■□□ 2.66
TRIM3-214ENST00000536344 CASKIN1Q8WXD9 1431 aa31.63■■■□□ 2.65
TRIM3-214ENST00000536344 GRIN2AQ12879 1464 aa31.61■■■□□ 2.65
TRIM3-214ENST00000536344 FYCO1Q9BQS8 1478 aa31.6■■■□□ 2.65
TRIM3-214ENST00000536344 PHLDB1Q86UU1 1377 aa31.6■■■□□ 2.65
TRIM3-214ENST00000536344 CCNB3Q8WWL7 1395 aa31.58■■■□□ 2.65
TRIM3-214ENST00000536344 FAM50AQ14320 339 aaKnown RBP31.57■■■□□ 2.64
TRIM3-214ENST00000536344 RRBP1Q9P2E9 1410 aaKnown RBP31.53■■■□□ 2.64
TRIM3-214ENST00000536344 ZNF316A6NFI3 1004 aaPredicted RBP31.53■■■□□ 2.64
TRIM3-214ENST00000536344 CFAP43Q8NDM7 1665 aa31.52■■■□□ 2.64
TRIM3-214ENST00000536344 MIER1Q8N108 512 aa31.51■■■□□ 2.63
TRIM3-214ENST00000536344 MAP3K1Q13233 1512 aa31.5■■■□□ 2.63
TRIM3-214ENST00000536344 MAGI1Q96QZ7 1491 aaPredicted RBP31.5■■■□□ 2.63
TRIM3-214ENST00000536344 LRRIQ1Q96JM4 1722 aa31.49■■■□□ 2.63
TRIM3-214ENST00000536344 SYNJ2O15056 1496 aa31.48■■■□□ 2.63
TRIM3-214ENST00000536344 MTUS2Q5JR59 1369 aa31.48■■■□□ 2.63
TRIM3-214ENST00000536344 KIAA0586Q9BVV6 1533 aa31.47■■■□□ 2.63
TRIM3-214ENST00000536344 CEP170Q5SW79 1584 aa31.44■■■□□ 2.62
TRIM3-214ENST00000536344 DISP1Q96F81 1524 aa31.38■■■□□ 2.61
TRIM3-214ENST00000536344 UGGT2Q9NYU1 1516 aa31.37■■■□□ 2.61
TRIM3-214ENST00000536344 JPH4Q96JJ6 628 aa31.36■■■□□ 2.61
TRIM3-214ENST00000536344 CDK13Q14004 1512 aaKnown RBP31.35■■■□□ 2.61
TRIM3-214ENST00000536344 KIAA0556O60303 1618 aa31.31■■■□□ 2.6
TRIM3-214ENST00000536344 MAGI3Q5TCQ9 1506 aa31.29■■■□□ 2.6
TRIM3-214ENST00000536344 EPRSP07814 1512 aaKnown RBP31.25■■■□□ 2.59
TRIM3-214ENST00000536344 NUP160Q12769 1436 aa31.23■■■□□ 2.59
TRIM3-214ENST00000536344 NCOA2Q15596 1464 aa31.23■■■□□ 2.59
TRIM3-214ENST00000536344 HECW1Q76N89 1606 aa31.21■■■□□ 2.59
TRIM3-214ENST00000536344 PLB1Q6P1J6 1458 aa31.19■■■□□ 2.58
TRIM3-214ENST00000536344 DHX57Q6P158 1386 aaKnown RBP31.17■■■□□ 2.58
TRIM3-214ENST00000536344 FGD6Q6ZV73 1430 aa31.17■■■□□ 2.58
TRIM3-214ENST00000536344 RAB3GAP2Q9H2M9 1393 aa31.16■■■□□ 2.58
TRIM3-214ENST00000536344 CCDC18Q5T9S5 1454 aa31.14■■■□□ 2.58
TRIM3-214ENST00000536344 NUP153P49790 1475 aaKnown RBP31.12■■■□□ 2.57
TRIM3-214ENST00000536344 CHD1O14646 1710 aa31.12■■■□□ 2.57
TRIM3-214ENST00000536344 EHBP1L1Q8N3D4 1523 aa31.11■■■□□ 2.57
TRIM3-214ENST00000536344 BCL11AQ9H165 835 aa31.11■■■□□ 2.57
TRIM3-214ENST00000536344 CARMIL2Q6F5E8 1435 aa31.1■■■□□ 2.57
TRIM3-214ENST00000536344 SUPT6HQ7KZ85 1726 aaKnown RBP31.1■■■□□ 2.57
TRIM3-214ENST00000536344 MYOM3Q5VTT5 1437 aa31.08■■■□□ 2.57
TRIM3-214ENST00000536344 RAPGEF6Q8TEU7 1601 aa31.07■■■□□ 2.56
TRIM3-214ENST00000536344 CHIC2Q9UKJ5 165 aa31.06■■■□□ 2.56
TRIM3-214ENST00000536344 PRG4Q92954 1404 aaPredicted RBP31.05■■■□□ 2.56
TRIM3-214ENST00000536344 SUPT16HQ9Y5B9 1047 aaKnown RBP31.04■■■□□ 2.56
TRIM3-214ENST00000536344 SETD5Q9C0A6 1442 aa31.03■■■□□ 2.56
TRIM3-214ENST00000536344 PTPRKQ15262 1439 aa31.03■■■□□ 2.56
TRIM3-214ENST00000536344 ANP32EQ9BTT0 268 aa30.98■■■□□ 2.55
TRIM3-214ENST00000536344 TSHZ2Q9NRE2 1034 aa30.96■■■□□ 2.55
TRIM3-214ENST00000536344 ZNF644Q9H582 1327 aaPredicted RBP30.95■■■□□ 2.54
TRIM3-214ENST00000536344 RRP7BPQ9NSQ0 103 aa30.94■■■□□ 2.54
TRIM3-214ENST00000536344 CDK11AQ9UQ88 783 aaPredicted RBP30.93■■■□□ 2.54
TRIM3-214ENST00000536344 PTPN23Q9H3S7 1636 aa30.93■■■□□ 2.54
TRIM3-214ENST00000536344 ARHGEF11O15085 1522 aa30.92■■■□□ 2.54
TRIM3-214ENST00000536344 PTPRGP23470 1445 aa30.89■■■□□ 2.54
TRIM3-214ENST00000536344 ERCC6L2Q5T890 1561 aa30.88■■■□□ 2.53
TRIM3-214ENST00000536344 ZNF777Q9ULD5 760 aaPredicted RBP30.88■■■□□ 2.53
TRIM3-214ENST00000536344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.86■■■□□ 2.53
TRIM3-214ENST00000536344 SIN3AQ96ST3 1273 aa30.83■■■□□ 2.53
TRIM3-214ENST00000536344 PLEKHD1A6NEE1 506 aa30.79■■■□□ 2.52
TRIM3-214ENST00000536344 KIF14Q15058 1648 aa30.79■■■□□ 2.52
TRIM3-214ENST00000536344 ATP10BO94823 1461 aa30.78■■■□□ 2.52
TRIM3-214ENST00000536344 TROQ12816 1431 aaPredicted RBP30.78■■■□□ 2.52
TRIM3-214ENST00000536344 ABCA8O94911 1581 aa30.77■■■□□ 2.52
TRIM3-214ENST00000536344 MAPKBP1O60336 1514 aa30.77■■■□□ 2.52
TRIM3-214ENST00000536344 CFDP1Q9UEE9 299 aaPredicted RBP30.75■■■□□ 2.51
TRIM3-214ENST00000536344 CLSPNQ9HAW4 1339 aa30.75■■■□□ 2.51
TRIM3-214ENST00000536344 NAIPQ13075 1403 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms