RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 FBLN2P98095 1184 aa36.53■■■■□ 3.44
RBFOX1-206ENST00000535565 CHD1O14646 1710 aa36.51■■■■□ 3.44
RBFOX1-206ENST00000535565 RANGAP1P46060 587 aaPredicted RBP36.48■■■■□ 3.43
RBFOX1-206ENST00000535565 IQGAP2Q13576 1575 aa36.44■■■■□ 3.42
RBFOX1-206ENST00000535565 CEP170Q5SW79 1584 aa36.42■■■■□ 3.42
RBFOX1-206ENST00000535565 KIAA0586Q9BVV6 1533 aa36.39■■■■□ 3.42
RBFOX1-206ENST00000535565 NUP160Q12769 1436 aa36.39■■■■□ 3.42
RBFOX1-206ENST00000535565 EFCAB5A4FU69 1503 aa36.35■■■■□ 3.41
RBFOX1-206ENST00000535565 ARHGAP35Q9NRY4 1499 aa36.34■■■■□ 3.41
RBFOX1-206ENST00000535565 ARAP1Q96P48 1450 aa36.25■■■■□ 3.39
RBFOX1-206ENST00000535565 SAMD9Q5K651 1589 aa36.25■■■■□ 3.39
RBFOX1-206ENST00000535565 UGGT2Q9NYU1 1516 aa36.23■■■■□ 3.39
RBFOX1-206ENST00000535565 VPS8Q8N3P4 1428 aa36.19■■■■□ 3.38
RBFOX1-206ENST00000535565 FHOD3Q2V2M9 1422 aa36.09■■■■□ 3.37
RBFOX1-206ENST00000535565 P3H3Q8IVL6 736 aa36.09■■■■□ 3.37
RBFOX1-206ENST00000535565 KIAA0556O60303 1618 aa36.06■■■■□ 3.36
RBFOX1-206ENST00000535565 JPH4Q96JJ6 628 aa36.05■■■■□ 3.36
RBFOX1-206ENST00000535565 CLASP1Q7Z460 1538 aa36.04■■■■□ 3.36
RBFOX1-206ENST00000535565 DISP1Q96F81 1524 aa36.03■■■■□ 3.36
RBFOX1-206ENST00000535565 SHROOM2Q13796 1616 aa36.01■■■■□ 3.35
RBFOX1-206ENST00000535565 FMN1Q68DA7 1419 aa35.99■■■■□ 3.35
RBFOX1-206ENST00000535565 CARMIL2Q6F5E8 1435 aa35.99■■■■□ 3.35
RBFOX1-206ENST00000535565 PRG4Q92954 1404 aaPredicted RBP35.89■■■■□ 3.34
RBFOX1-206ENST00000535565 PCF11O94913 1555 aaKnown RBP35.89■■■■□ 3.34
RBFOX1-206ENST00000535565 OSCARQ8IYS5 282 aa35.87■■■■□ 3.33
RBFOX1-206ENST00000535565 APLP2Q06481 763 aa35.85■■■■□ 3.33
RBFOX1-206ENST00000535565 FYCO1Q9BQS8 1478 aa35.84■■■■□ 3.33
RBFOX1-206ENST00000535565 CASKIN1Q8WXD9 1431 aa35.82■■■■□ 3.33
RBFOX1-206ENST00000535565 HECW1Q76N89 1606 aa35.71■■■■□ 3.31
RBFOX1-206ENST00000535565 ATP1B4Q9UN42 357 aaPredicted RBP35.69■■■■□ 3.3
RBFOX1-206ENST00000535565 ERCC6L2Q5T890 1561 aa35.69■■■■□ 3.3
RBFOX1-206ENST00000535565 MAP3K1Q13233 1512 aa35.69■■■■□ 3.3
RBFOX1-206ENST00000535565 TTBK1Q5TCY1 1321 aaPredicted RBP35.68■■■■□ 3.3
RBFOX1-206ENST00000535565 RAPGEF6Q8TEU7 1601 aa35.68■■■■□ 3.3
RBFOX1-206ENST00000535565 CFAP43Q8NDM7 1665 aa35.67■■■■□ 3.3
RBFOX1-206ENST00000535565 TIAM1Q13009 1591 aa35.66■■■■□ 3.3
RBFOX1-206ENST00000535565 PPARGC1BQ86YN6 1023 aaKnown RBP35.63■■■■□ 3.29
RBFOX1-206ENST00000535565 LRRIQ1Q96JM4 1722 aa35.63■■■■□ 3.29
RBFOX1-206ENST00000535565 PTPRGP23470 1445 aa35.62■■■■□ 3.29
RBFOX1-206ENST00000535565 CCDC18Q5T9S5 1454 aa35.58■■■■□ 3.29
RBFOX1-206ENST00000535565 PLB1Q6P1J6 1458 aa35.55■■■■□ 3.28
RBFOX1-206ENST00000535565 ABCA8O94911 1581 aa35.55■■■■□ 3.28
RBFOX1-206ENST00000535565 EPRSP07814 1512 aaKnown RBP35.51■■■■□ 3.27
RBFOX1-206ENST00000535565 NUP153P49790 1475 aaKnown RBP35.49■■■■□ 3.27
RBFOX1-206ENST00000535565 LRRC9Q6ZRR7 1453 aa35.46■■■■□ 3.27
RBFOX1-206ENST00000535565 KANK4Q5T7N3 995 aaPredicted RBP35.45■■■■□ 3.27
RBFOX1-206ENST00000535565 UACAQ9BZF9 1416 aa35.43■■■■□ 3.26
RBFOX1-206ENST00000535565 CDK13Q14004 1512 aaKnown RBP35.42■■■■□ 3.26
RBFOX1-206ENST00000535565 ABCC2Q92887 1545 aa35.36■■■■□ 3.25
RBFOX1-206ENST00000535565 TRIM26Q12899 539 aaPredicted RBP35.36■■■■□ 3.25
RBFOX1-206ENST00000535565 MTUS2Q5JR59 1369 aa35.34■■■■□ 3.25
RBFOX1-206ENST00000535565 EHBP1L1Q8N3D4 1523 aa35.34■■■■□ 3.25
RBFOX1-206ENST00000535565 ARID3CA6NKF2 412 aa35.33■■■■□ 3.25
RBFOX1-206ENST00000535565 ARHGEF11O15085 1522 aa35.32■■■■□ 3.24
RBFOX1-206ENST00000535565 UHRF1BP1LA0JNW5 1464 aa35.3■■■■□ 3.24
RBFOX1-206ENST00000535565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.29■■■■□ 3.24
RBFOX1-206ENST00000535565 HNRNPUL2Q1KMD3 747 aaKnown RBP35.29■■■■□ 3.24
RBFOX1-206ENST00000535565 CDK11AQ9UQ88 783 aaPredicted RBP35.27■■■■□ 3.24
RBFOX1-206ENST00000535565 MAGI3Q5TCQ9 1506 aa35.26■■■■□ 3.23
RBFOX1-206ENST00000535565 ATP10BO94823 1461 aa35.25■■■■□ 3.23
RBFOX1-206ENST00000535565 SUPT6HQ7KZ85 1726 aaKnown RBP35.25■■■■□ 3.23
RBFOX1-206ENST00000535565 RIMBP3CA6NJZ7 1639 aa35.2■■■■□ 3.23
RBFOX1-206ENST00000535565 RIMBP3BA6NNM3 1639 aa35.2■■■■□ 3.23
RBFOX1-206ENST00000535565 RIMBP3Q9UFD9 1639 aa35.2■■■■□ 3.23
RBFOX1-206ENST00000535565 ADCY10Q96PN6 1610 aa35.19■■■■□ 3.22
RBFOX1-206ENST00000535565 ZCCHC11Q5TAX3 1644 aaKnown RBP35.15■■■■□ 3.22
RBFOX1-206ENST00000535565 PCGF6Q9BYE7 350 aa35.15■■■■□ 3.22
RBFOX1-206ENST00000535565 KDM5BQ9UGL1 1544 aa35.14■■■■□ 3.22
RBFOX1-206ENST00000535565 TROQ12816 1431 aaPredicted RBP35.13■■■■□ 3.21
RBFOX1-206ENST00000535565 NCOA2Q15596 1464 aa35.11■■■■□ 3.21
RBFOX1-206ENST00000535565 PLEKHD1A6NEE1 506 aa35.09■■■■□ 3.21
RBFOX1-206ENST00000535565 PHLDB1Q86UU1 1377 aa35.06■■■■□ 3.2
RBFOX1-206ENST00000535565 KIF14Q15058 1648 aa35.02■■■■□ 3.2
RBFOX1-206ENST00000535565 RRBP1Q9P2E9 1410 aaKnown RBP35.01■■■■□ 3.2
RBFOX1-206ENST00000535565 MYOM3Q5VTT5 1437 aa34.96■■■■□ 3.19
RBFOX1-206ENST00000535565 CCNB3Q8WWL7 1395 aa34.94■■■■□ 3.18
RBFOX1-206ENST00000535565 NPM1P06748 294 aaKnown RBP eCLIP34.92■■■■□ 3.18
RBFOX1-206ENST00000535565 CYB5RLQ6IPT4 315 aa34.91■■■■□ 3.18
RBFOX1-206ENST00000535565 ITSN2Q9NZM3 1697 aa34.9■■■■□ 3.18
RBFOX1-206ENST00000535565 FGD6Q6ZV73 1430 aa34.9■■■■□ 3.18
RBFOX1-206ENST00000535565 WDR7Q9Y4E6 1490 aa34.83■■■■□ 3.17
RBFOX1-206ENST00000535565 ABCC10Q5T3U5 1492 aa34.83■■■■□ 3.17
RBFOX1-206ENST00000535565 MIA2Q96PC5 1412 aa34.82■■■■□ 3.16
RBFOX1-206ENST00000535565 PTPN23Q9H3S7 1636 aa34.81■■■■□ 3.16
RBFOX1-206ENST00000535565 CDC42BPAQ5VT25 1732 aa34.8■■■■□ 3.16
RBFOX1-206ENST00000535565 ASXL2Q76L83 1435 aa34.78■■■■□ 3.16
RBFOX1-206ENST00000535565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.78■■■■□ 3.16
RBFOX1-206ENST00000535565 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.76■■■■□ 3.16
RBFOX1-206ENST00000535565 GPATCH8Q9UKJ3 1502 aaKnown RBP34.76■■■■□ 3.16
RBFOX1-206ENST00000535565 FAM50AQ14320 339 aaKnown RBP34.75■■■■□ 3.15
RBFOX1-206ENST00000535565 TTC37Q6PGP7 1564 aa34.74■■■■□ 3.15
RBFOX1-206ENST00000535565 KCNH8Q96L42 1107 aa34.74■■■■□ 3.15
RBFOX1-206ENST00000535565 MYO5CQ9NQX4 1742 aa34.72■■■■□ 3.15
RBFOX1-206ENST00000535565 TCOF1Q13428 1488 aaKnown RBP34.72■■■■□ 3.15
RBFOX1-206ENST00000535565 PREX2Q70Z35 1606 aa34.71■■■■□ 3.15
RBFOX1-206ENST00000535565 MAPKBP1O60336 1514 aa34.69■■■■□ 3.14
RBFOX1-206ENST00000535565 CFDP1Q9UEE9 299 aaPredicted RBP34.67■■■■□ 3.14
RBFOX1-206ENST00000535565 CDC42BPBQ9Y5S2 1711 aa34.65■■■■□ 3.14
RBFOX1-206ENST00000535565 ABCA9Q8IUA7 1624 aa34.63■■■■□ 3.13
RBFOX1-206ENST00000535565 CAMSAP2Q08AD1 1489 aa34.59■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms