RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 ARAP1Q96P48 1450 aa36.5■■■■□ 3.43
SSPN-204ENST00000535504 KIAA0586Q9BVV6 1533 aa36.49■■■■□ 3.43
SSPN-204ENST00000535504 JPH4Q96JJ6 628 aa36.48■■■■□ 3.43
SSPN-204ENST00000535504 SHROOM2Q13796 1616 aa36.48■■■■□ 3.43
SSPN-204ENST00000535504 PRG4Q92954 1404 aaPredicted RBP36.4■■■■□ 3.42
SSPN-204ENST00000535504 CSRNP3Q8WYN3 585 aa36.39■■■■□ 3.42
SSPN-204ENST00000535504 IQGAP2Q13576 1575 aa36.32■■■■□ 3.4
SSPN-204ENST00000535504 PRXQ9BXM0 1461 aa36.31■■■■□ 3.4
SSPN-204ENST00000535504 ERCC6L2Q5T890 1561 aa36.3■■■■□ 3.4
SSPN-204ENST00000535504 FAM9AQ8IZU1 332 aaPredicted RBP36.28■■■■□ 3.4
SSPN-204ENST00000535504 CARMIL2Q6F5E8 1435 aa36.23■■■■□ 3.39
SSPN-204ENST00000535504 CTTNBP2Q8WZ74 1663 aa36.19■■■■□ 3.38
SSPN-204ENST00000535504 UGGT2Q9NYU1 1516 aa36.06■■■■□ 3.36
SSPN-204ENST00000535504 TNIKQ9UKE5 1360 aa36.03■■■■□ 3.36
SSPN-204ENST00000535504 KIF21BO75037 1637 aa36.02■■■■□ 3.36
SSPN-204ENST00000535504 GOLGA3Q08378 1498 aa36.01■■■■□ 3.36
SSPN-204ENST00000535504 PTPRGP23470 1445 aa36■■■■□ 3.35
SSPN-204ENST00000535504 TTBK1Q5TCY1 1321 aaPredicted RBP35.99■■■■□ 3.35
SSPN-204ENST00000535504 NPM1P06748 294 aaKnown RBP eCLIP35.95■■■■□ 3.35
SSPN-204ENST00000535504 DISP1Q96F81 1524 aa35.94■■■■□ 3.34
SSPN-204ENST00000535504 TRHP20396 242 aaPredicted RBP35.93■■■■□ 3.34
SSPN-204ENST00000535504 KIAA0556O60303 1618 aa35.93■■■■□ 3.34
SSPN-204ENST00000535504 UBTFP17480 764 aaKnown RBP35.86■■■■□ 3.33
SSPN-204ENST00000535504 EHMT2Q96KQ7 1210 aa35.82■■■■□ 3.32
SSPN-204ENST00000535504 ADCY10Q96PN6 1610 aa35.77■■■■□ 3.32
SSPN-204ENST00000535504 RANGAP1P46060 587 aaPredicted RBP35.75■■■■□ 3.31
SSPN-204ENST00000535504 UACAQ9BZF9 1416 aa35.74■■■■□ 3.31
SSPN-204ENST00000535504 UHRF1BP1LA0JNW5 1464 aa35.68■■■■□ 3.3
SSPN-204ENST00000535504 P3H3Q8IVL6 736 aa35.68■■■■□ 3.3
SSPN-204ENST00000535504 ABCC2Q92887 1545 aa35.67■■■■□ 3.3
SSPN-204ENST00000535504 SAMD9Q5K651 1589 aa35.64■■■■□ 3.3
SSPN-204ENST00000535504 EFCAB5A4FU69 1503 aa35.61■■■■□ 3.29
SSPN-204ENST00000535504 MAPKBP1O60336 1514 aa35.61■■■■□ 3.29
SSPN-204ENST00000535504 PLB1Q6P1J6 1458 aa35.54■■■■□ 3.28
SSPN-204ENST00000535504 ABCA8O94911 1581 aa35.49■■■■□ 3.27
SSPN-204ENST00000535504 FHOD3Q2V2M9 1422 aa35.49■■■■□ 3.27
SSPN-204ENST00000535504 KDM5BQ9UGL1 1544 aa35.48■■■■□ 3.27
SSPN-204ENST00000535504 ABCC10Q5T3U5 1492 aa35.44■■■■□ 3.26
SSPN-204ENST00000535504 FAM69CQ0P6D2 419 aa35.44■■■■□ 3.26
SSPN-204ENST00000535504 ZCCHC11Q5TAX3 1644 aaKnown RBP35.43■■■■□ 3.26
SSPN-204ENST00000535504 ASXL2Q76L83 1435 aa35.41■■■■□ 3.26
SSPN-204ENST00000535504 RAPGEF6Q8TEU7 1601 aa35.38■■■■□ 3.25
SSPN-204ENST00000535504 KIF13AQ9H1H9 1805 aa35.36■■■■□ 3.25
SSPN-204ENST00000535504 DIP2BQ9P265 1576 aa35.35■■■■□ 3.25
SSPN-204ENST00000535504 FMN1Q68DA7 1419 aa35.32■■■■□ 3.25
SSPN-204ENST00000535504 ARHGAP35Q9NRY4 1499 aa35.31■■■■□ 3.24
SSPN-204ENST00000535504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.31■■■■□ 3.24
SSPN-204ENST00000535504 HNRNPUL2Q1KMD3 747 aaKnown RBP35.31■■■■□ 3.24
SSPN-204ENST00000535504 ARID3CA6NKF2 412 aa35.29■■■■□ 3.24
SSPN-204ENST00000535504 WDR7Q9Y4E6 1490 aa35.26■■■■□ 3.23
SSPN-204ENST00000535504 CLIP1P30622 1438 aa35.21■■■■□ 3.23
SSPN-204ENST00000535504 ATP10BO94823 1461 aa35.21■■■■□ 3.23
SSPN-204ENST00000535504 ATP1B4Q9UN42 357 aaPredicted RBP35.2■■■■□ 3.23
SSPN-204ENST00000535504 GLI2P10070 1586 aa35.19■■■■□ 3.22
SSPN-204ENST00000535504 EPRSP07814 1512 aaKnown RBP35.18■■■■□ 3.22
SSPN-204ENST00000535504 NUP153P49790 1475 aaKnown RBP35.17■■■■□ 3.22
SSPN-204ENST00000535504 KCNH8Q96L42 1107 aa35.15■■■■□ 3.22
SSPN-204ENST00000535504 HECW1Q76N89 1606 aa35.13■■■■□ 3.21
SSPN-204ENST00000535504 TSPOAP1O95153 1857 aa35.12■■■■□ 3.21
SSPN-204ENST00000535504 PLEKHD1A6NEE1 506 aa35.08■■■■□ 3.21
SSPN-204ENST00000535504 CEP162Q5TB80 1403 aa35.02■■■■□ 3.2
SSPN-204ENST00000535504 CDK11AQ9UQ88 783 aaPredicted RBP35.02■■■■□ 3.2
SSPN-204ENST00000535504 LOC105371045A0A1W2PR82 267 aa35.01■■■■□ 3.2
SSPN-204ENST00000535504 TEX14Q8IWB6 1497 aa35.01■■■■□ 3.19
SSPN-204ENST00000535504 MAP3K4Q9Y6R4 1608 aa35■■■■□ 3.19
SSPN-204ENST00000535504 CFAP43Q8NDM7 1665 aa34.98■■■■□ 3.19
SSPN-204ENST00000535504 CD109Q6YHK3 1445 aa34.96■■■■□ 3.19
SSPN-204ENST00000535504 CASKIN1Q8WXD9 1431 aa34.96■■■■□ 3.19
SSPN-204ENST00000535504 CDK13Q14004 1512 aaKnown RBP34.94■■■■□ 3.18
SSPN-204ENST00000535504 PCF11O94913 1555 aaKnown RBP34.91■■■■□ 3.18
SSPN-204ENST00000535504 CCDC18Q5T9S5 1454 aa34.91■■■■□ 3.18
SSPN-204ENST00000535504 FYCO1Q9BQS8 1478 aa34.9■■■■□ 3.18
SSPN-204ENST00000535504 KDM6BO15054 1643 aa34.88■■■■□ 3.17
SSPN-204ENST00000535504 PPRC1Q5VV67 1664 aaKnown RBP34.86■■■■□ 3.17
SSPN-204ENST00000535504 MAGI3Q5TCQ9 1506 aa34.85■■■■□ 3.17
SSPN-204ENST00000535504 ABCA9Q8IUA7 1624 aa34.84■■■■□ 3.17
SSPN-204ENST00000535504 TROQ12816 1431 aaPredicted RBP34.74■■■■□ 3.15
SSPN-204ENST00000535504 LRRIQ1Q96JM4 1722 aa34.72■■■■□ 3.15
SSPN-204ENST00000535504 KIF14Q15058 1648 aa34.71■■■■□ 3.15
SSPN-204ENST00000535504 PHLDB1Q86UU1 1377 aa34.7■■■■□ 3.15
SSPN-204ENST00000535504 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.69■■■■□ 3.14
SSPN-204ENST00000535504 NEO1Q92859 1461 aa34.63■■■■□ 3.13
SSPN-204ENST00000535504 TTC37Q6PGP7 1564 aa34.62■■■■□ 3.13
SSPN-204ENST00000535504 VPS8Q8N3P4 1428 aa34.62■■■■□ 3.13
SSPN-204ENST00000535504 CFAP74Q9C0B2 1584 aa34.62■■■■□ 3.13
SSPN-204ENST00000535504 MTUS2Q5JR59 1369 aa34.57■■■■□ 3.12
SSPN-204ENST00000535504 MYO5CQ9NQX4 1742 aa34.55■■■■□ 3.12
SSPN-204ENST00000535504 FANCAO15360 1455 aa34.55■■■■□ 3.12
SSPN-204ENST00000535504 ARAP3Q8WWN8 1544 aa34.53■■■■□ 3.12
SSPN-204ENST00000535504 PLCH2O75038 1416 aa34.53■■■■□ 3.12
SSPN-204ENST00000535504 COL17A1Q9UMD9 1497 aaPredicted RBP34.51■■■■□ 3.11
SSPN-204ENST00000535504 EFCAB2Q5VUJ9 269 aa34.5■■■■□ 3.11
SSPN-204ENST00000535504 AKNAQ7Z591 1439 aa34.47■■■■□ 3.11
SSPN-204ENST00000535504 APLP2Q06481 763 aa34.47■■■■□ 3.11
SSPN-204ENST00000535504 ARHGAP5Q13017 1502 aa34.45■■■■□ 3.11
SSPN-204ENST00000535504 EHBP1L1Q8N3D4 1523 aa34.45■■■■□ 3.1
SSPN-204ENST00000535504 DENND4BO75064 1496 aaPredicted RBP34.41■■■■□ 3.1
SSPN-204ENST00000535504 ADGRL1O94910 1474 aa34.39■■■■□ 3.1
SSPN-204ENST00000535504 TIAM1Q13009 1591 aa34.38■■■■□ 3.09
SSPN-204ENST00000535504 RAPGEF3O95398 923 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms