RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 EEA1Q15075 1411 aa38.08■■■■□ 3.69
SFSWAP-204ENST00000535399 JPH4Q96JJ6 628 aa38.08■■■■□ 3.69
SFSWAP-204ENST00000535399 SHROOM2Q13796 1616 aa38.08■■■■□ 3.69
SFSWAP-204ENST00000535399 PRXQ9BXM0 1461 aa38.08■■■■□ 3.69
SFSWAP-204ENST00000535399 CSRNP3Q8WYN3 585 aa38.07■■■■□ 3.68
SFSWAP-204ENST00000535399 CYB5RLQ6IPT4 315 aa38.05■■■■□ 3.68
SFSWAP-204ENST00000535399 ERCC6L2Q5T890 1561 aa38.01■■■■□ 3.67
SFSWAP-204ENST00000535399 PRG4Q92954 1404 aaPredicted RBP37.96■■■■□ 3.67
SFSWAP-204ENST00000535399 FAM9AQ8IZU1 332 aaPredicted RBP37.94■■■■□ 3.66
SFSWAP-204ENST00000535399 IQGAP2Q13576 1575 aa37.84■■■■□ 3.65
SFSWAP-204ENST00000535399 UGGT2Q9NYU1 1516 aa37.69■■■■□ 3.62
SFSWAP-204ENST00000535399 CARMIL2Q6F5E8 1435 aa37.66■■■■□ 3.62
SFSWAP-204ENST00000535399 CTTNBP2Q8WZ74 1663 aa37.64■■■■□ 3.62
SFSWAP-204ENST00000535399 KIF21BO75037 1637 aa37.64■■■■□ 3.62
SFSWAP-204ENST00000535399 DISP1Q96F81 1524 aa37.63■■■■□ 3.61
SFSWAP-204ENST00000535399 TNIKQ9UKE5 1360 aa37.57■■■■□ 3.61
SFSWAP-204ENST00000535399 PTPRGP23470 1445 aa37.53■■■■□ 3.6
SFSWAP-204ENST00000535399 KIAA0556O60303 1618 aa37.48■■■■□ 3.59
SFSWAP-204ENST00000535399 GOLGA3Q08378 1498 aa37.45■■■■□ 3.59
SFSWAP-204ENST00000535399 TTBK1Q5TCY1 1321 aaPredicted RBP37.44■■■■□ 3.58
SFSWAP-204ENST00000535399 EHMT2Q96KQ7 1210 aa37.43■■■■□ 3.58
SFSWAP-204ENST00000535399 UBTFP17480 764 aaKnown RBP37.37■■■■□ 3.57
SFSWAP-204ENST00000535399 ADCY10Q96PN6 1610 aa37.34■■■■□ 3.57
SFSWAP-204ENST00000535399 UACAQ9BZF9 1416 aa37.28■■■■□ 3.56
SFSWAP-204ENST00000535399 SAMD9Q5K651 1589 aa37.27■■■■□ 3.56
SFSWAP-204ENST00000535399 P3H3Q8IVL6 736 aa37.27■■■■□ 3.56
SFSWAP-204ENST00000535399 RANGAP1P46060 587 aaPredicted RBP37.26■■■■□ 3.56
SFSWAP-204ENST00000535399 UHRF1BP1LA0JNW5 1464 aa37.25■■■■□ 3.55
SFSWAP-204ENST00000535399 NPM1P06748 294 aaKnown RBP eCLIP37.23■■■■□ 3.55
SFSWAP-204ENST00000535399 TRHP20396 242 aaPredicted RBP37.2■■■■□ 3.55
SFSWAP-204ENST00000535399 ABCC2Q92887 1545 aa37.19■■■■□ 3.54
SFSWAP-204ENST00000535399 PLB1Q6P1J6 1458 aa37.16■■■■□ 3.54
SFSWAP-204ENST00000535399 EFCAB5A4FU69 1503 aa37.12■■■■□ 3.53
SFSWAP-204ENST00000535399 FHOD3Q2V2M9 1422 aa37.11■■■■□ 3.53
SFSWAP-204ENST00000535399 ABCA8O94911 1581 aa37.11■■■■□ 3.53
SFSWAP-204ENST00000535399 MAPKBP1O60336 1514 aa37.1■■■■□ 3.53
SFSWAP-204ENST00000535399 KDM5BQ9UGL1 1544 aa37.06■■■■□ 3.52
SFSWAP-204ENST00000535399 ARHGAP35Q9NRY4 1499 aa37.01■■■■□ 3.51
SFSWAP-204ENST00000535399 ABCC10Q5T3U5 1492 aa36.94■■■■□ 3.5
SFSWAP-204ENST00000535399 ASXL2Q76L83 1435 aa36.93■■■■□ 3.5
SFSWAP-204ENST00000535399 ZCCHC11Q5TAX3 1644 aaKnown RBP36.92■■■■□ 3.5
SFSWAP-204ENST00000535399 RAPGEF6Q8TEU7 1601 aa36.88■■■■□ 3.49
SFSWAP-204ENST00000535399 FAM69CQ0P6D2 419 aa36.87■■■■□ 3.49
SFSWAP-204ENST00000535399 DIP2BQ9P265 1576 aa36.84■■■■□ 3.49
SFSWAP-204ENST00000535399 ATP10BO94823 1461 aa36.83■■■■□ 3.49
SFSWAP-204ENST00000535399 LOC105371045A0A1W2PR82 267 aa36.83■■■■□ 3.49
SFSWAP-204ENST00000535399 ARID3CA6NKF2 412 aa36.83■■■■□ 3.49
SFSWAP-204ENST00000535399 NUP153P49790 1475 aaKnown RBP36.82■■■■□ 3.48
SFSWAP-204ENST00000535399 KIF13AQ9H1H9 1805 aa36.8■■■■□ 3.48
SFSWAP-204ENST00000535399 CLIP1P30622 1438 aa36.8■■■■□ 3.48
SFSWAP-204ENST00000535399 FMN1Q68DA7 1419 aa36.8■■■■□ 3.48
SFSWAP-204ENST00000535399 WDR7Q9Y4E6 1490 aa36.75■■■■□ 3.47
SFSWAP-204ENST00000535399 EPRSP07814 1512 aaKnown RBP36.72■■■■□ 3.47
SFSWAP-204ENST00000535399 GLI2P10070 1586 aa36.68■■■■□ 3.46
SFSWAP-204ENST00000535399 CEP162Q5TB80 1403 aa36.67■■■■□ 3.46
SFSWAP-204ENST00000535399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.63■■■■□ 3.45
SFSWAP-204ENST00000535399 HNRNPUL2Q1KMD3 747 aaKnown RBP36.63■■■■□ 3.45
SFSWAP-204ENST00000535399 KCNH8Q96L42 1107 aa36.6■■■■□ 3.45
SFSWAP-204ENST00000535399 ATP1B4Q9UN42 357 aaPredicted RBP36.58■■■■□ 3.45
SFSWAP-204ENST00000535399 HECW1Q76N89 1606 aa36.56■■■■□ 3.44
SFSWAP-204ENST00000535399 CASKIN1Q8WXD9 1431 aa36.55■■■■□ 3.44
SFSWAP-204ENST00000535399 CDK13Q14004 1512 aaKnown RBP36.54■■■■□ 3.44
SFSWAP-204ENST00000535399 PLEKHD1A6NEE1 506 aa36.5■■■■□ 3.43
SFSWAP-204ENST00000535399 PCF11O94913 1555 aaKnown RBP36.49■■■■□ 3.43
SFSWAP-204ENST00000535399 MAP3K4Q9Y6R4 1608 aa36.47■■■■□ 3.43
SFSWAP-204ENST00000535399 FYCO1Q9BQS8 1478 aa36.43■■■■□ 3.42
SFSWAP-204ENST00000535399 TSPOAP1O95153 1857 aa36.43■■■■□ 3.42
SFSWAP-204ENST00000535399 CD109Q6YHK3 1445 aa36.42■■■■□ 3.42
SFSWAP-204ENST00000535399 PPRC1Q5VV67 1664 aaKnown RBP36.41■■■■□ 3.42
SFSWAP-204ENST00000535399 CDK11AQ9UQ88 783 aaPredicted RBP36.36■■■■□ 3.41
SFSWAP-204ENST00000535399 CFAP43Q8NDM7 1665 aa36.35■■■■□ 3.41
SFSWAP-204ENST00000535399 CCDC18Q5T9S5 1454 aa36.35■■■■□ 3.41
SFSWAP-204ENST00000535399 MAGI3Q5TCQ9 1506 aa36.34■■■■□ 3.41
SFSWAP-204ENST00000535399 LRRIQ1Q96JM4 1722 aa36.34■■■■□ 3.41
SFSWAP-204ENST00000535399 ABCA9Q8IUA7 1624 aa36.34■■■■□ 3.41
SFSWAP-204ENST00000535399 TEX14Q8IWB6 1497 aa36.32■■■■□ 3.41
SFSWAP-204ENST00000535399 TROQ12816 1431 aaPredicted RBP36.28■■■■□ 3.4
SFSWAP-204ENST00000535399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.24■■■■□ 3.396e-7■□□□□ 10.6
SFSWAP-204ENST00000535399 VPS8Q8N3P4 1428 aa36.22■■■■□ 3.39
SFSWAP-204ENST00000535399 KDM6BO15054 1643 aa36.19■■■■□ 3.38
SFSWAP-204ENST00000535399 COL17A1Q9UMD9 1497 aaPredicted RBP36.17■■■■□ 3.38
SFSWAP-204ENST00000535399 TTC37Q6PGP7 1564 aa36.16■■■■□ 3.38
SFSWAP-204ENST00000535399 KIF14Q15058 1648 aa36.12■■■■□ 3.37
SFSWAP-204ENST00000535399 PHLDB1Q86UU1 1377 aa36.07■■■■□ 3.36
SFSWAP-204ENST00000535399 NEO1Q92859 1461 aa36.06■■■■□ 3.36
SFSWAP-204ENST00000535399 PLCH2O75038 1416 aa36.06■■■■□ 3.36
SFSWAP-204ENST00000535399 ARAP3Q8WWN8 1544 aa36.02■■■■□ 3.36
SFSWAP-204ENST00000535399 MTUS2Q5JR59 1369 aa36.01■■■■□ 3.35
SFSWAP-204ENST00000535399 FANCAO15360 1455 aa36■■■■□ 3.35
SFSWAP-204ENST00000535399 AKNAQ7Z591 1439 aa35.95■■■■□ 3.35
SFSWAP-204ENST00000535399 TIAM1Q13009 1591 aa35.93■■■■□ 3.34
SFSWAP-204ENST00000535399 EHBP1L1Q8N3D4 1523 aa35.92■■■■□ 3.34
SFSWAP-204ENST00000535399 EFCAB2Q5VUJ9 269 aa35.91■■■■□ 3.34
SFSWAP-204ENST00000535399 MYO5CQ9NQX4 1742 aa35.91■■■■□ 3.34
SFSWAP-204ENST00000535399 CFAP74Q9C0B2 1584 aa35.9■■■■□ 3.34
SFSWAP-204ENST00000535399 MAP3K1Q13233 1512 aa35.88■■■■□ 3.33
SFSWAP-204ENST00000535399 RAPGEF3O95398 923 aa35.86■■■■□ 3.33
SFSWAP-204ENST00000535399 ARHGAP5Q13017 1502 aa35.85■■■■□ 3.33
SFSWAP-204ENST00000535399 GPATCH8Q9UKJ3 1502 aaKnown RBP35.83■■■■□ 3.33
SFSWAP-204ENST00000535399 DENND4BO75064 1496 aaPredicted RBP35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms