RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 PRG4Q92954 1404 aaPredicted RBP14.74□□□□□ -0.05
SFSWAP-202ENST00000535202 JPH4Q96JJ6 628 aa14.72□□□□□ -0.05
SFSWAP-202ENST00000535202 CARMIL1Q5VZK9 1371 aa14.68□□□□□ -0.06
SFSWAP-202ENST00000535202 KIAA0586Q9BVV6 1533 aa14.67□□□□□ -0.06
SFSWAP-202ENST00000535202 IQGAP2Q13576 1575 aa14.58□□□□□ -0.08
SFSWAP-202ENST00000535202 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
SFSWAP-202ENST00000535202 ADCY10Q96PN6 1610 aa14.56□□□□□ -0.08
SFSWAP-202ENST00000535202 KIF13AQ9H1H9 1805 aa14.54□□□□□ -0.08
SFSWAP-202ENST00000535202 CARMIL2Q6F5E8 1435 aa14.53□□□□□ -0.08
SFSWAP-202ENST00000535202 TTBK1Q5TCY1 1321 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-202ENST00000535202 NPM1P06748 294 aaKnown RBP eCLIP14.53□□□□□ -0.08
SFSWAP-202ENST00000535202 PTPRGP23470 1445 aa14.51□□□□□ -0.09
SFSWAP-202ENST00000535202 TNIKQ9UKE5 1360 aa14.5□□□□□ -0.09
SFSWAP-202ENST00000535202 MAPKBP1O60336 1514 aa14.5□□□□□ -0.09
SFSWAP-202ENST00000535202 CTTNBP2Q8WZ74 1663 aa14.49□□□□□ -0.09
SFSWAP-202ENST00000535202 DISP1Q96F81 1524 aa14.48□□□□□ -0.09
SFSWAP-202ENST00000535202 UGGT2Q9NYU1 1516 aa14.47□□□□□ -0.09
SFSWAP-202ENST00000535202 ABCC10Q5T3U5 1492 aa14.46□□□□□ -0.09
SFSWAP-202ENST00000535202 DIP2BQ9P265 1576 aa14.46□□□□□ -0.09
SFSWAP-202ENST00000535202 KIAA0556O60303 1618 aa14.45□□□□□ -0.1
SFSWAP-202ENST00000535202 FAM69CQ0P6D2 419 aa14.44□□□□□ -0.1
SFSWAP-202ENST00000535202 PRXQ9BXM0 1461 aa14.44□□□□□ -0.1
SFSWAP-202ENST00000535202 ABCC2Q92887 1545 aa14.42□□□□□ -0.1
SFSWAP-202ENST00000535202 UACAQ9BZF9 1416 aa14.41□□□□□ -0.1
SFSWAP-202ENST00000535202 UHRF1BP1LA0JNW5 1464 aa14.4□□□□□ -0.1
SFSWAP-202ENST00000535202 TSPOAP1O95153 1857 aa14.39□□□□□ -0.11
SFSWAP-202ENST00000535202 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
SFSWAP-202ENST00000535202 ASXL2Q76L83 1435 aa14.36□□□□□ -0.11
SFSWAP-202ENST00000535202 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
SFSWAP-202ENST00000535202 ZCCHC11Q5TAX3 1644 aaKnown RBP14.35□□□□□ -0.11
SFSWAP-202ENST00000535202 PLB1Q6P1J6 1458 aa14.35□□□□□ -0.11
SFSWAP-202ENST00000535202 KDM5BQ9UGL1 1544 aa14.34□□□□□ -0.11
SFSWAP-202ENST00000535202 EEA1Q15075 1411 aa14.33□□□□□ -0.11
SFSWAP-202ENST00000535202 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
SFSWAP-202ENST00000535202 GLI2P10070 1586 aa14.3□□□□□ -0.12
SFSWAP-202ENST00000535202 KDM6BO15054 1643 aa14.3□□□□□ -0.12
SFSWAP-202ENST00000535202 ABCA8O94911 1581 aa14.3□□□□□ -0.12
SFSWAP-202ENST00000535202 EPRSP07814 1512 aaKnown RBP14.28□□□□□ -0.12
SFSWAP-202ENST00000535202 P3H3Q8IVL6 736 aa14.28□□□□□ -0.12
SFSWAP-202ENST00000535202 PPRC1Q5VV67 1664 aaKnown RBP14.27□□□□□ -0.12
SFSWAP-202ENST00000535202 AEBP2Q6ZN18 517 aaPredicted RBP14.26□□□□□ -0.13
SFSWAP-202ENST00000535202 SAMD9Q5K651 1589 aa14.26□□□□□ -0.13
SFSWAP-202ENST00000535202 WDR7Q9Y4E6 1490 aa14.25□□□□□ -0.13
SFSWAP-202ENST00000535202 MAP3K4Q9Y6R4 1608 aa14.25□□□□□ -0.13
SFSWAP-202ENST00000535202 KIF21BO75037 1637 aa14.23□□□□□ -0.13
SFSWAP-202ENST00000535202 RANGAP1P46060 587 aaPredicted RBP14.23□□□□□ -0.13
SFSWAP-202ENST00000535202 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
SFSWAP-202ENST00000535202 ARID3CA6NKF2 412 aa14.21□□□□□ -0.13
SFSWAP-202ENST00000535202 TEX14Q8IWB6 1497 aa14.19□□□□□ -0.14
SFSWAP-202ENST00000535202 RAPGEF6Q8TEU7 1601 aa14.19□□□□□ -0.14
SFSWAP-202ENST00000535202 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
SFSWAP-202ENST00000535202 CFAP43Q8NDM7 1665 aa14.17□□□□□ -0.14
SFSWAP-202ENST00000535202 FHOD3Q2V2M9 1422 aa14.17□□□□□ -0.14
SFSWAP-202ENST00000535202 EHMT2Q96KQ7 1210 aa14.17□□□□□ -0.14
SFSWAP-202ENST00000535202 ATP10BO94823 1461 aa14.17□□□□□ -0.14
SFSWAP-202ENST00000535202 EFCAB5A4FU69 1503 aa14.15□□□□□ -0.14
SFSWAP-202ENST00000535202 CD109Q6YHK3 1445 aa14.14□□□□□ -0.15
SFSWAP-202ENST00000535202 COL17A1Q9UMD9 1497 aaPredicted RBP14.13□□□□□ -0.15
SFSWAP-202ENST00000535202 MAGI3Q5TCQ9 1506 aa14.12□□□□□ -0.15
SFSWAP-202ENST00000535202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
SFSWAP-202ENST00000535202 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
SFSWAP-202ENST00000535202 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
SFSWAP-202ENST00000535202 NUP153P49790 1475 aaKnown RBP14.11□□□□□ -0.15
SFSWAP-202ENST00000535202 ABCA9Q8IUA7 1624 aa14.08□□□□□ -0.16
SFSWAP-202ENST00000535202 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
SFSWAP-202ENST00000535202 ARHGAP35Q9NRY4 1499 aa14.03□□□□□ -0.16
SFSWAP-202ENST00000535202 CDK13Q14004 1512 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-202ENST00000535202 ADGRL1O94910 1474 aa14.01□□□□□ -0.17
SFSWAP-202ENST00000535202 PLEKHD1A6NEE1 506 aa14.01□□□□□ -0.17
SFSWAP-202ENST00000535202 FMN1Q68DA7 1419 aa14□□□□□ -0.17
SFSWAP-202ENST00000535202 HECW1Q76N89 1606 aa14□□□□□ -0.17
SFSWAP-202ENST00000535202 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
SFSWAP-202ENST00000535202 ATP1B4Q9UN42 357 aaPredicted RBP13.99□□□□□ -0.17
SFSWAP-202ENST00000535202 NEO1Q92859 1461 aa13.98□□□□□ -0.17
SFSWAP-202ENST00000535202 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
SFSWAP-202ENST00000535202 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.97□□□□□ -0.17
SFSWAP-202ENST00000535202 TTC37Q6PGP7 1564 aa13.96□□□□□ -0.17
SFSWAP-202ENST00000535202 CFAP74Q9C0B2 1584 aa13.94□□□□□ -0.18
SFSWAP-202ENST00000535202 FRMPD1Q5SYB0 1578 aa13.93□□□□□ -0.18
SFSWAP-202ENST00000535202 RAPGEF3O95398 923 aa13.93□□□□□ -0.18
SFSWAP-202ENST00000535202 LRRIQ1Q96JM4 1722 aa13.93□□□□□ -0.18
SFSWAP-202ENST00000535202 FANCAO15360 1455 aa13.92□□□□□ -0.18
SFSWAP-202ENST00000535202 AKNAQ7Z591 1439 aa13.9□□□□□ -0.18
SFSWAP-202ENST00000535202 PCF11O94913 1555 aaKnown RBP13.9□□□□□ -0.18
SFSWAP-202ENST00000535202 DENND4BO75064 1496 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-202ENST00000535202 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-202ENST00000535202 RICTORQ6R327 1708 aa13.89□□□□□ -0.19
SFSWAP-202ENST00000535202 KIF14Q15058 1648 aa13.89□□□□□ -0.19
SFSWAP-202ENST00000535202 MYO5CQ9NQX4 1742 aa13.88□□□□□ -0.19
SFSWAP-202ENST00000535202 TROQ12816 1431 aaPredicted RBP13.87□□□□□ -0.19
SFSWAP-202ENST00000535202 PLCH2O75038 1416 aa13.86□□□□□ -0.19
SFSWAP-202ENST00000535202 CLIP1P30622 1438 aa13.86□□□□□ -0.19
SFSWAP-202ENST00000535202 CASKIN1Q8WXD9 1431 aa13.86□□□□□ -0.19
SFSWAP-202ENST00000535202 ARHGEF40Q8TER5 1519 aa13.85□□□□□ -0.19
SFSWAP-202ENST00000535202 CCDC18Q5T9S5 1454 aa13.85□□□□□ -0.19
SFSWAP-202ENST00000535202 FYCO1Q9BQS8 1478 aa13.83□□□□□ -0.2
SFSWAP-202ENST00000535202 ZMYM4Q5VZL5 1548 aa13.83□□□□□ -0.2
SFSWAP-202ENST00000535202 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
SFSWAP-202ENST00000535202 SCAPERQ9BY12 1400 aa13.81□□□□□ -0.2
SFSWAP-202ENST00000535202 ARHGAP5Q13017 1502 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms