RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TNIKQ9UKE5 1360 aa19.88■□□□□ 0.77
SCARB1-204ENST00000535005 KIAA0586Q9BVV6 1533 aa19.87■□□□□ 0.77
SCARB1-204ENST00000535005 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
SCARB1-204ENST00000535005 CTTNBP2Q8WZ74 1663 aa19.82■□□□□ 0.76
SCARB1-204ENST00000535005 CLASP1Q7Z460 1538 aa19.8■□□□□ 0.76
SCARB1-204ENST00000535005 IQGAP2Q13576 1575 aa19.79■□□□□ 0.76
SCARB1-204ENST00000535005 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
SCARB1-204ENST00000535005 UGGT2Q9NYU1 1516 aa19.73■□□□□ 0.75
SCARB1-204ENST00000535005 SHROOM2Q13796 1616 aa19.71■□□□□ 0.75
SCARB1-204ENST00000535005 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
SCARB1-204ENST00000535005 CLIP1P30622 1438 aa19.66■□□□□ 0.74
SCARB1-204ENST00000535005 EFCAB5A4FU69 1503 aa19.66■□□□□ 0.74
SCARB1-204ENST00000535005 PRG4Q92954 1404 aaPredicted RBP19.64■□□□□ 0.73
SCARB1-204ENST00000535005 DISP1Q96F81 1524 aa19.64■□□□□ 0.73
SCARB1-204ENST00000535005 SAMD9Q5K651 1589 aa19.64■□□□□ 0.73
SCARB1-204ENST00000535005 CARMIL2Q6F5E8 1435 aa19.63■□□□□ 0.73
SCARB1-204ENST00000535005 RANGAP1P46060 587 aaPredicted RBP19.62■□□□□ 0.73
SCARB1-204ENST00000535005 ARHGAP35Q9NRY4 1499 aa19.62■□□□□ 0.73
SCARB1-204ENST00000535005 KIAA0556O60303 1618 aa19.59■□□□□ 0.73
SCARB1-204ENST00000535005 ERCC6L2Q5T890 1561 aa19.55■□□□□ 0.72
SCARB1-204ENST00000535005 P3H3Q8IVL6 736 aa19.54■□□□□ 0.72
SCARB1-204ENST00000535005 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
SCARB1-204ENST00000535005 FHOD3Q2V2M9 1422 aa19.53■□□□□ 0.72
SCARB1-204ENST00000535005 ARHGEF11O15085 1522 aa19.5■□□□□ 0.71
SCARB1-204ENST00000535005 PTPRGP23470 1445 aa19.48■□□□□ 0.71
SCARB1-204ENST00000535005 FMN1Q68DA7 1419 aa19.47■□□□□ 0.71
SCARB1-204ENST00000535005 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
SCARB1-204ENST00000535005 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
SCARB1-204ENST00000535005 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
SCARB1-204ENST00000535005 VPS8Q8N3P4 1428 aa19.43■□□□□ 0.7
SCARB1-204ENST00000535005 DNAJC5Q9H3Z4 198 aa19.42■□□□□ 0.7
SCARB1-204ENST00000535005 CASKIN1Q8WXD9 1431 aa19.38■□□□□ 0.69
SCARB1-204ENST00000535005 TTBK1Q5TCY1 1321 aaPredicted RBP19.37■□□□□ 0.69
SCARB1-204ENST00000535005 ABCA8O94911 1581 aa19.37■□□□□ 0.69
SCARB1-204ENST00000535005 PLB1Q6P1J6 1458 aa19.36■□□□□ 0.69
SCARB1-204ENST00000535005 UACAQ9BZF9 1416 aa19.36■□□□□ 0.69
SCARB1-204ENST00000535005 FYCO1Q9BQS8 1478 aa19.34■□□□□ 0.69
SCARB1-204ENST00000535005 UHRF1BP1LA0JNW5 1464 aa19.34■□□□□ 0.69
SCARB1-204ENST00000535005 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.69
SCARB1-204ENST00000535005 PCF11O94913 1555 aaKnown RBP19.33■□□□□ 0.68
SCARB1-204ENST00000535005 ABCC2Q92887 1545 aa19.31■□□□□ 0.68
SCARB1-204ENST00000535005 CYB5RLQ6IPT4 315 aa19.3■□□□□ 0.68
SCARB1-204ENST00000535005 HECW1Q76N89 1606 aa19.29■□□□□ 0.68
SCARB1-204ENST00000535005 NUP153P49790 1475 aaKnown RBP19.29■□□□□ 0.68
SCARB1-204ENST00000535005 HRCP23327 699 aa19.27■□□□□ 0.68
SCARB1-204ENST00000535005 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
SCARB1-204ENST00000535005 ADCY10Q96PN6 1610 aa19.25■□□□□ 0.67
SCARB1-204ENST00000535005 EPRSP07814 1512 aaKnown RBP19.24■□□□□ 0.67
SCARB1-204ENST00000535005 MAP3K1Q13233 1512 aa19.23■□□□□ 0.67
SCARB1-204ENST00000535005 KDM5BQ9UGL1 1544 aa19.23■□□□□ 0.67
SCARB1-204ENST00000535005 CCDC18Q5T9S5 1454 aa19.23■□□□□ 0.67
SCARB1-204ENST00000535005 ATP10BO94823 1461 aa19.23■□□□□ 0.67
SCARB1-204ENST00000535005 LRRIQ1Q96JM4 1722 aa19.19■□□□□ 0.66
SCARB1-204ENST00000535005 APLP2Q06481 763 aa19.18■□□□□ 0.66
SCARB1-204ENST00000535005 CDK13Q14004 1512 aaKnown RBP19.18■□□□□ 0.66
SCARB1-204ENST00000535005 TIAM1Q13009 1591 aa19.17■□□□□ 0.66
SCARB1-204ENST00000535005 ARID3CA6NKF2 412 aa19.16■□□□□ 0.66
SCARB1-204ENST00000535005 NPM1P06748 294 aaKnown RBP eCLIP19.16■□□□□ 0.66
SCARB1-204ENST00000535005 CFAP43Q8NDM7 1665 aa19.15■□□□□ 0.66
SCARB1-204ENST00000535005 ZCCHC11Q5TAX3 1644 aaKnown RBP19.15■□□□□ 0.66
SCARB1-204ENST00000535005 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.65
SCARB1-204ENST00000535005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
SCARB1-204ENST00000535005 HNRNPUL2Q1KMD3 747 aaKnown RBP19.13■□□□□ 0.65
SCARB1-204ENST00000535005 PLEKHD1A6NEE1 506 aa19.11■□□□□ 0.65
SCARB1-204ENST00000535005 LRRC9Q6ZRR7 1453 aa19.1■□□□□ 0.65
SCARB1-204ENST00000535005 KANK4Q5T7N3 995 aaPredicted RBP19.09■□□□□ 0.65
SCARB1-204ENST00000535005 MAGI3Q5TCQ9 1506 aa19.08■□□□□ 0.64
SCARB1-204ENST00000535005 TROQ12816 1431 aaPredicted RBP19.07■□□□□ 0.64
SCARB1-204ENST00000535005 MAPKBP1O60336 1514 aa19.07■□□□□ 0.64
SCARB1-204ENST00000535005 MTUS2Q5JR59 1369 aa19.07■□□□□ 0.64
SCARB1-204ENST00000535005 EHBP1L1Q8N3D4 1523 aa19.05■□□□□ 0.64
SCARB1-204ENST00000535005 ASXL2Q76L83 1435 aa19.05■□□□□ 0.64
SCARB1-204ENST00000535005 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
SCARB1-204ENST00000535005 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
SCARB1-204ENST00000535005 SUPT6HQ7KZ85 1726 aaKnown RBP18.96■□□□□ 0.63
SCARB1-204ENST00000535005 KIF14Q15058 1648 aa18.96■□□□□ 0.62
SCARB1-204ENST00000535005 KCNH8Q96L42 1107 aa18.95■□□□□ 0.62
SCARB1-204ENST00000535005 NCOA2Q15596 1464 aa18.95■□□□□ 0.62
SCARB1-204ENST00000535005 ABCC10Q5T3U5 1492 aa18.94■□□□□ 0.62
SCARB1-204ENST00000535005 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.91■□□□□ 0.622e-7■■■■□ 22.7
SCARB1-204ENST00000535005 GLI2P10070 1586 aa18.91■□□□□ 0.62
SCARB1-204ENST00000535005 ABCA9Q8IUA7 1624 aa18.89■□□□□ 0.61
SCARB1-204ENST00000535005 DIP2BQ9P265 1576 aa18.88■□□□□ 0.61
SCARB1-204ENST00000535005 PHLDB1Q86UU1 1377 aa18.88■□□□□ 0.61
SCARB1-204ENST00000535005 CCNB3Q8WWL7 1395 aa18.87■□□□□ 0.61
SCARB1-204ENST00000535005 TTC37Q6PGP7 1564 aa18.86■□□□□ 0.61
SCARB1-204ENST00000535005 GPATCH8Q9UKJ3 1502 aaKnown RBP18.86■□□□□ 0.61
SCARB1-204ENST00000535005 MYOM3Q5VTT5 1437 aa18.85■□□□□ 0.61
SCARB1-204ENST00000535005 FAM69CQ0P6D2 419 aa18.84■□□□□ 0.61
SCARB1-204ENST00000535005 PLCH2O75038 1416 aa18.83■□□□□ 0.61
SCARB1-204ENST00000535005 CD109Q6YHK3 1445 aa18.82■□□□□ 0.6
SCARB1-204ENST00000535005 MIA2Q96PC5 1412 aa18.82■□□□□ 0.6
SCARB1-204ENST00000535005 ARAP3Q8WWN8 1544 aa18.82■□□□□ 0.6
SCARB1-204ENST00000535005 CDC42BPAQ5VT25 1732 aa18.81■□□□□ 0.6
SCARB1-204ENST00000535005 ITSN2Q9NZM3 1697 aa18.8■□□□□ 0.6
SCARB1-204ENST00000535005 MAP3K4Q9Y6R4 1608 aa18.8■□□□□ 0.6
SCARB1-204ENST00000535005 FGD6Q6ZV73 1430 aa18.8■□□□□ 0.6
SCARB1-204ENST00000535005 PREX2Q70Z35 1606 aa18.8■□□□□ 0.6
SCARB1-204ENST00000535005 MYO5CQ9NQX4 1742 aa18.8■□□□□ 0.6
SCARB1-204ENST00000535005 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms