RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
CSDE1-217ENST00000534699 PRG4Q92954 1404 aaPredicted RBP17.89■□□□□ 0.45
CSDE1-217ENST00000534699 ERCC6L2Q5T890 1561 aa17.88■□□□□ 0.45
CSDE1-217ENST00000534699 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
CSDE1-217ENST00000534699 IQGAP2Q13576 1575 aa17.81■□□□□ 0.44
CSDE1-217ENST00000534699 CARMIL2Q6F5E8 1435 aa17.8■□□□□ 0.44
CSDE1-217ENST00000534699 MAPKBP1O60336 1514 aa17.79■□□□□ 0.44
CSDE1-217ENST00000534699 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.43
CSDE1-217ENST00000534699 TRHP20396 242 aaPredicted RBP17.76■□□□□ 0.43
CSDE1-217ENST00000534699 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
CSDE1-217ENST00000534699 UHRF1BP1LA0JNW5 1464 aa17.73■□□□□ 0.43
CSDE1-217ENST00000534699 EEA1Q15075 1411 aa17.73■□□□□ 0.43
CSDE1-217ENST00000534699 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
CSDE1-217ENST00000534699 ADCY10Q96PN6 1610 aa17.7■□□□□ 0.42
CSDE1-217ENST00000534699 NPM1P06748 294 aaKnown RBP eCLIP17.7■□□□□ 0.42
CSDE1-217ENST00000534699 KIF13AQ9H1H9 1805 aa17.69■□□□□ 0.42
CSDE1-217ENST00000534699 PRXQ9BXM0 1461 aa17.68■□□□□ 0.42
CSDE1-217ENST00000534699 GOLGA3Q08378 1498 aa17.68■□□□□ 0.42
CSDE1-217ENST00000534699 PTPRGP23470 1445 aa17.68■□□□□ 0.42
CSDE1-217ENST00000534699 ABCC10Q5T3U5 1492 aa17.66■□□□□ 0.42
CSDE1-217ENST00000534699 DISP1Q96F81 1524 aa17.64■□□□□ 0.41
CSDE1-217ENST00000534699 KIAA0556O60303 1618 aa17.64■□□□□ 0.41
CSDE1-217ENST00000534699 ABCC2Q92887 1545 aa17.62■□□□□ 0.41
CSDE1-217ENST00000534699 DIP2BQ9P265 1576 aa17.61■□□□□ 0.41
CSDE1-217ENST00000534699 GLI2P10070 1586 aa17.6■□□□□ 0.41
CSDE1-217ENST00000534699 PLB1Q6P1J6 1458 aa17.59■□□□□ 0.41
CSDE1-217ENST00000534699 UACAQ9BZF9 1416 aa17.59■□□□□ 0.41
CSDE1-217ENST00000534699 KDM5BQ9UGL1 1544 aa17.56■□□□□ 0.4
CSDE1-217ENST00000534699 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
CSDE1-217ENST00000534699 CSRNP3Q8WYN3 585 aa17.51■□□□□ 0.39
CSDE1-217ENST00000534699 KIF21BO75037 1637 aa17.49■□□□□ 0.39
CSDE1-217ENST00000534699 ABCA8O94911 1581 aa17.49■□□□□ 0.39
CSDE1-217ENST00000534699 ZCCHC11Q5TAX3 1644 aaKnown RBP17.48■□□□□ 0.39
CSDE1-217ENST00000534699 SAMD9Q5K651 1589 aa17.47■□□□□ 0.39
CSDE1-217ENST00000534699 FAM69CQ0P6D2 419 aa17.46■□□□□ 0.39
CSDE1-217ENST00000534699 ASXL2Q76L83 1435 aa17.46■□□□□ 0.38
CSDE1-217ENST00000534699 MAP3K4Q9Y6R4 1608 aa17.43■□□□□ 0.38
CSDE1-217ENST00000534699 TEX14Q8IWB6 1497 aa17.41■□□□□ 0.38
CSDE1-217ENST00000534699 EFCAB5A4FU69 1503 aa17.41■□□□□ 0.38
CSDE1-217ENST00000534699 EPRSP07814 1512 aaKnown RBP17.4■□□□□ 0.38
CSDE1-217ENST00000534699 CFAP43Q8NDM7 1665 aa17.39■□□□□ 0.37
CSDE1-217ENST00000534699 KDM6BO15054 1643 aa17.39■□□□□ 0.37
CSDE1-217ENST00000534699 WDR7Q9Y4E6 1490 aa17.38■□□□□ 0.37
CSDE1-217ENST00000534699 PPRC1Q5VV67 1664 aaKnown RBP17.38■□□□□ 0.37
CSDE1-217ENST00000534699 RAPGEF6Q8TEU7 1601 aa17.33■□□□□ 0.37
CSDE1-217ENST00000534699 MAGI3Q5TCQ9 1506 aa17.33■□□□□ 0.36
CSDE1-217ENST00000534699 TSPOAP1O95153 1857 aa17.33■□□□□ 0.36
CSDE1-217ENST00000534699 PHLDB1Q86UU1 1377 aa17.3■□□□□ 0.36
CSDE1-217ENST00000534699 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
CSDE1-217ENST00000534699 ABCA9Q8IUA7 1624 aa17.25■□□□□ 0.35
CSDE1-217ENST00000534699 ATP10BO94823 1461 aa17.25■□□□□ 0.35
CSDE1-217ENST00000534699 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
CSDE1-217ENST00000534699 CD109Q6YHK3 1445 aa17.21■□□□□ 0.35
CSDE1-217ENST00000534699 ARAP3Q8WWN8 1544 aa17.19■□□□□ 0.34
CSDE1-217ENST00000534699 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
CSDE1-217ENST00000534699 NUP153P49790 1475 aaKnown RBP17.18■□□□□ 0.34
CSDE1-217ENST00000534699 CFAP74Q9C0B2 1584 aa17.17■□□□□ 0.34
CSDE1-217ENST00000534699 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
CSDE1-217ENST00000534699 NEO1Q92859 1461 aa17.17■□□□□ 0.34
CSDE1-217ENST00000534699 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
CSDE1-217ENST00000534699 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
CSDE1-217ENST00000534699 PLEKHD1A6NEE1 506 aa17.08■□□□□ 0.32
CSDE1-217ENST00000534699 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
CSDE1-217ENST00000534699 ARHGAP35Q9NRY4 1499 aa17.08■□□□□ 0.32
CSDE1-217ENST00000534699 COL17A1Q9UMD9 1497 aaPredicted RBP17.07■□□□□ 0.32
CSDE1-217ENST00000534699 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
CSDE1-217ENST00000534699 KCNH8Q96L42 1107 aa17.04■□□□□ 0.32
CSDE1-217ENST00000534699 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
CSDE1-217ENST00000534699 CCDC18Q5T9S5 1454 aa17.03■□□□□ 0.32
CSDE1-217ENST00000534699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17■□□□□ 0.31
CSDE1-217ENST00000534699 CASKIN1Q8WXD9 1431 aa16.99■□□□□ 0.31
CSDE1-217ENST00000534699 ZMYM4Q5VZL5 1548 aa16.98■□□□□ 0.31
CSDE1-217ENST00000534699 MYO5CQ9NQX4 1742 aa16.98■□□□□ 0.31
CSDE1-217ENST00000534699 CLIP1P30622 1438 aa16.97■□□□□ 0.31
CSDE1-217ENST00000534699 ADGRL1O94910 1474 aa16.97■□□□□ 0.31
CSDE1-217ENST00000534699 MAGI2Q86UL8 1455 aa16.97■□□□□ 0.31
CSDE1-217ENST00000534699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
CSDE1-217ENST00000534699 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
CSDE1-217ENST00000534699 KIF14Q15058 1648 aa16.97■□□□□ 0.31
CSDE1-217ENST00000534699 RICTORQ6R327 1708 aa16.96■□□□□ 0.31
CSDE1-217ENST00000534699 FYCO1Q9BQS8 1478 aa16.96■□□□□ 0.31
CSDE1-217ENST00000534699 PLCH2O75038 1416 aa16.96■□□□□ 0.3
CSDE1-217ENST00000534699 TROQ12816 1431 aaPredicted RBP16.96■□□□□ 0.3
CSDE1-217ENST00000534699 KDM4FA0A1W2PPD8 638 aa16.95■□□□□ 0.3
CSDE1-217ENST00000534699 DENND4BO75064 1496 aaPredicted RBP16.95■□□□□ 0.3
CSDE1-217ENST00000534699 AKNAQ7Z591 1439 aa16.94■□□□□ 0.3
CSDE1-217ENST00000534699 FRMPD1Q5SYB0 1578 aa16.94■□□□□ 0.3
CSDE1-217ENST00000534699 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
CSDE1-217ENST00000534699 FANCAO15360 1455 aa16.94■□□□□ 0.3
CSDE1-217ENST00000534699 CDK13Q14004 1512 aaKnown RBP16.93■□□□□ 0.3
CSDE1-217ENST00000534699 ARHGEF40Q8TER5 1519 aa16.91■□□□□ 0.3
CSDE1-217ENST00000534699 LRRIQ1Q96JM4 1722 aa16.91■□□□□ 0.3
CSDE1-217ENST00000534699 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.29
CSDE1-217ENST00000534699 ADAMTSL3P82987 1691 aa16.88■□□□□ 0.29
CSDE1-217ENST00000534699 EFCAB2Q5VUJ9 269 aa16.86■□□□□ 0.29
CSDE1-217ENST00000534699 RANGAP1P46060 587 aaPredicted RBP16.85■□□□□ 0.29
CSDE1-217ENST00000534699 PREX2Q70Z35 1606 aa16.85■□□□□ 0.29
CSDE1-217ENST00000534699 BCORL1Q5H9F3 1711 aa16.85■□□□□ 0.29
CSDE1-217ENST00000534699 ARID3CA6NKF2 412 aa16.85■□□□□ 0.29
CSDE1-217ENST00000534699 POGZQ7Z3K3 1410 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms