RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 CARMIL1Q5VZK9 1371 aa18.76■□□□□ 0.59
SDHD-208ENST00000534010 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
SDHD-208ENST00000534010 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
SDHD-208ENST00000534010 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
SDHD-208ENST00000534010 IQGAP2Q13576 1575 aa18.63■□□□□ 0.57
SDHD-208ENST00000534010 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
SDHD-208ENST00000534010 ADCY10Q96PN6 1610 aa18.59■□□□□ 0.57
SDHD-208ENST00000534010 UGGT2Q9NYU1 1516 aa18.59■□□□□ 0.57
SDHD-208ENST00000534010 DISP1Q96F81 1524 aa18.58■□□□□ 0.56
SDHD-208ENST00000534010 KIF13AQ9H1H9 1805 aa18.55■□□□□ 0.56
SDHD-208ENST00000534010 MAPKBP1O60336 1514 aa18.54■□□□□ 0.56
SDHD-208ENST00000534010 CTTNBP2Q8WZ74 1663 aa18.54■□□□□ 0.56
SDHD-208ENST00000534010 TRHP20396 242 aaPredicted RBP18.5■□□□□ 0.55
SDHD-208ENST00000534010 TNIKQ9UKE5 1360 aa18.49■□□□□ 0.55
SDHD-208ENST00000534010 KIAA0556O60303 1618 aa18.49■□□□□ 0.55
SDHD-208ENST00000534010 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
SDHD-208ENST00000534010 UHRF1BP1LA0JNW5 1464 aa18.47■□□□□ 0.55
SDHD-208ENST00000534010 PTPRGP23470 1445 aa18.47■□□□□ 0.55
SDHD-208ENST00000534010 ABCC10Q5T3U5 1492 aa18.45■□□□□ 0.54
SDHD-208ENST00000534010 EEA1Q15075 1411 aa18.44■□□□□ 0.54
SDHD-208ENST00000534010 DIP2BQ9P265 1576 aa18.43■□□□□ 0.54
SDHD-208ENST00000534010 ABCC2Q92887 1545 aa18.42■□□□□ 0.54
SDHD-208ENST00000534010 KDM5BQ9UGL1 1544 aa18.39■□□□□ 0.53
SDHD-208ENST00000534010 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
SDHD-208ENST00000534010 UACAQ9BZF9 1416 aa18.38■□□□□ 0.53
SDHD-208ENST00000534010 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
SDHD-208ENST00000534010 SAMD9Q5K651 1589 aa18.34■□□□□ 0.53
SDHD-208ENST00000534010 ABCA8O94911 1581 aa18.34■□□□□ 0.53
SDHD-208ENST00000534010 KIF21BO75037 1637 aa18.32■□□□□ 0.52
SDHD-208ENST00000534010 GLI2P10070 1586 aa18.31■□□□□ 0.52
SDHD-208ENST00000534010 CHIC1Q5VXU3 224 aa18.31■□□□□ 0.52
SDHD-208ENST00000534010 ZCCHC11Q5TAX3 1644 aaKnown RBP18.3■□□□□ 0.52
SDHD-208ENST00000534010 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
SDHD-208ENST00000534010 PLB1Q6P1J6 1458 aa18.28■□□□□ 0.52
SDHD-208ENST00000534010 ASXL2Q76L83 1435 aa18.28■□□□□ 0.52
SDHD-208ENST00000534010 PPRC1Q5VV67 1664 aaKnown RBP18.27■□□□□ 0.52
SDHD-208ENST00000534010 FAM69CQ0P6D2 419 aa18.25■□□□□ 0.51
SDHD-208ENST00000534010 EPRSP07814 1512 aaKnown RBP18.22■□□□□ 0.51
SDHD-208ENST00000534010 MAP3K4Q9Y6R4 1608 aa18.21■□□□□ 0.51
SDHD-208ENST00000534010 WDR7Q9Y4E6 1490 aa18.17■□□□□ 0.5
SDHD-208ENST00000534010 TSPOAP1O95153 1857 aa18.17■□□□□ 0.5
SDHD-208ENST00000534010 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
SDHD-208ENST00000534010 EFCAB5A4FU69 1503 aa18.14■□□□□ 0.49
SDHD-208ENST00000534010 ATP10BO94823 1461 aa18.13■□□□□ 0.49
SDHD-208ENST00000534010 RAPGEF6Q8TEU7 1601 aa18.12■□□□□ 0.49
SDHD-208ENST00000534010 KDM6BO15054 1643 aa18.11■□□□□ 0.49
SDHD-208ENST00000534010 CFAP43Q8NDM7 1665 aa18.1■□□□□ 0.49
SDHD-208ENST00000534010 NUP153P49790 1475 aaKnown RBP18.09■□□□□ 0.49
SDHD-208ENST00000534010 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
SDHD-208ENST00000534010 FHOD3Q2V2M9 1422 aa18.06■□□□□ 0.48
SDHD-208ENST00000534010 MAGI3Q5TCQ9 1506 aa18.06■□□□□ 0.48
SDHD-208ENST00000534010 COL17A1Q9UMD9 1497 aaPredicted RBP18.06■□□□□ 0.48
SDHD-208ENST00000534010 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
SDHD-208ENST00000534010 ABCA9Q8IUA7 1624 aa18.03■□□□□ 0.48
SDHD-208ENST00000534010 TEX14Q8IWB6 1497 aa18.02■□□□□ 0.48
SDHD-208ENST00000534010 ARHGAP35Q9NRY4 1499 aa18.02■□□□□ 0.48
SDHD-208ENST00000534010 CD109Q6YHK3 1445 aa17.98■□□□□ 0.47
SDHD-208ENST00000534010 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
SDHD-208ENST00000534010 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
SDHD-208ENST00000534010 LRRIQ1Q96JM4 1722 aa17.9■□□□□ 0.46
SDHD-208ENST00000534010 UBTFP17480 764 aaKnown RBP17.89■□□□□ 0.45
SDHD-208ENST00000534010 HECW1Q76N89 1606 aa17.88■□□□□ 0.45
SDHD-208ENST00000534010 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
SDHD-208ENST00000534010 CDK13Q14004 1512 aaKnown RBP17.88■□□□□ 0.45
SDHD-208ENST00000534010 PHLDB1Q86UU1 1377 aa17.87■□□□□ 0.45
SDHD-208ENST00000534010 NEO1Q92859 1461 aa17.87■□□□□ 0.45
SDHD-208ENST00000534010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.87■□□□□ 0.45
SDHD-208ENST00000534010 ARID3CA6NKF2 412 aa17.85■□□□□ 0.45
SDHD-208ENST00000534010 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
SDHD-208ENST00000534010 TTC37Q6PGP7 1564 aa17.84■□□□□ 0.45
SDHD-208ENST00000534010 FRMPD1Q5SYB0 1578 aa17.82■□□□□ 0.44
SDHD-208ENST00000534010 KDM4FA0A1W2PPD8 638 aa17.81■□□□□ 0.44
SDHD-208ENST00000534010 CASKIN1Q8WXD9 1431 aa17.8■□□□□ 0.44
SDHD-208ENST00000534010 PCF11O94913 1555 aaKnown RBP17.79■□□□□ 0.44
SDHD-208ENST00000534010 PLEKHD1A6NEE1 506 aa17.79■□□□□ 0.44
SDHD-208ENST00000534010 RICTORQ6R327 1708 aa17.77■□□□□ 0.44
SDHD-208ENST00000534010 CFAP74Q9C0B2 1584 aa17.76■□□□□ 0.43
SDHD-208ENST00000534010 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
SDHD-208ENST00000534010 KIF14Q15058 1648 aa17.75■□□□□ 0.43
SDHD-208ENST00000534010 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
SDHD-208ENST00000534010 CLIP1P30622 1438 aa17.74■□□□□ 0.43
SDHD-208ENST00000534010 TROQ12816 1431 aaPredicted RBP17.74■□□□□ 0.43
SDHD-208ENST00000534010 PLCH2O75038 1416 aa17.73■□□□□ 0.43
SDHD-208ENST00000534010 ADGRL1O94910 1474 aa17.73■□□□□ 0.43
SDHD-208ENST00000534010 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
SDHD-208ENST00000534010 FANCAO15360 1455 aa17.72■□□□□ 0.43
SDHD-208ENST00000534010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
SDHD-208ENST00000534010 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
SDHD-208ENST00000534010 ZMYM4Q5VZL5 1548 aa17.72■□□□□ 0.43
SDHD-208ENST00000534010 AKNAQ7Z591 1439 aa17.72■□□□□ 0.43
SDHD-208ENST00000534010 MYO5CQ9NQX4 1742 aa17.71■□□□□ 0.43
SDHD-208ENST00000534010 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
SDHD-208ENST00000534010 CDC42BPBQ9Y5S2 1711 aa17.67■□□□□ 0.42
SDHD-208ENST00000534010 DENND4BO75064 1496 aaPredicted RBP17.67■□□□□ 0.42
SDHD-208ENST00000534010 ARHGEF40Q8TER5 1519 aa17.66■□□□□ 0.42
SDHD-208ENST00000534010 RAPGEF3O95398 923 aa17.65■□□□□ 0.42
SDHD-208ENST00000534010 CDK11AQ9UQ88 783 aaPredicted RBP17.65■□□□□ 0.42
SDHD-208ENST00000534010 PREX2Q70Z35 1606 aa17.64■□□□□ 0.41
SDHD-208ENST00000534010 ADAMTSL3P82987 1691 aa17.63■□□□□ 0.41
SDHD-208ENST00000534010 CEP162Q5TB80 1403 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms