RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 NISCHQ9Y2I1 1504 aa27.14■■□□□ 1.94
SDHD-208ENST00000534010 CCDC180Q9P1Z9 1646 aa24.29■■□□□ 1.48
SDHD-208ENST00000534010 ABCC9O60706 1549 aa23.78■■□□□ 1.4
SDHD-208ENST00000534010 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
SDHD-208ENST00000534010 NACADO15069 1562 aa22.84■■□□□ 1.25
SDHD-208ENST00000534010 MYO15BQ96JP2 1530 aa22.76■■□□□ 1.23
SDHD-208ENST00000534010 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
SDHD-208ENST00000534010 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
SDHD-208ENST00000534010 UNC13AQ9UPW8 1703 aa22.47■■□□□ 1.19
SDHD-208ENST00000534010 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
SDHD-208ENST00000534010 BICRAQ9NZM4 1560 aa22.31■■□□□ 1.16
SDHD-208ENST00000534010 DNAJC5BQ9UF47 199 aa22.12■■□□□ 1.13
SDHD-208ENST00000534010 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.13
SDHD-208ENST00000534010 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
SDHD-208ENST00000534010 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
SDHD-208ENST00000534010 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
SDHD-208ENST00000534010 CC2D2AQ9P2K1 1620 aa21.59■■□□□ 1.05
SDHD-208ENST00000534010 CECR2Q9BXF3 1484 aa21.43■■□□□ 1.02
SDHD-208ENST00000534010 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
SDHD-208ENST00000534010 NCAPD3P42695 1498 aa21.1■□□□□ 0.97
SDHD-208ENST00000534010 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
SDHD-208ENST00000534010 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
SDHD-208ENST00000534010 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.95
SDHD-208ENST00000534010 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
SDHD-208ENST00000534010 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
SDHD-208ENST00000534010 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
SDHD-208ENST00000534010 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
SDHD-208ENST00000534010 WIZO95785 1651 aa20.64■□□□□ 0.89
SDHD-208ENST00000534010 NESP48681 1621 aa20.57■□□□□ 0.88
SDHD-208ENST00000534010 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
SDHD-208ENST00000534010 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
SDHD-208ENST00000534010 CUX2O14529 1486 aa20.48■□□□□ 0.87
SDHD-208ENST00000534010 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
SDHD-208ENST00000534010 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
SDHD-208ENST00000534010 THOC2Q8NI27 1593 aaKnown RBP20.41■□□□□ 0.86
SDHD-208ENST00000534010 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
SDHD-208ENST00000534010 KIF21AQ7Z4S6 1674 aa20.37■□□□□ 0.85
SDHD-208ENST00000534010 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
SDHD-208ENST00000534010 CFTRP13569 1480 aa20.29■□□□□ 0.84
SDHD-208ENST00000534010 WDR62O43379 1518 aa20.18■□□□□ 0.82
SDHD-208ENST00000534010 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
SDHD-208ENST00000534010 PRDM2Q13029 1718 aa20.16■□□□□ 0.82
SDHD-208ENST00000534010 CCDC88BA6NC98 1476 aa20.16■□□□□ 0.82
SDHD-208ENST00000534010 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
SDHD-208ENST00000534010 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
SDHD-208ENST00000534010 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
SDHD-208ENST00000534010 URB2Q14146 1524 aaKnown RBP20.01■□□□□ 0.79
SDHD-208ENST00000534010 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
SDHD-208ENST00000534010 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
SDHD-208ENST00000534010 DNMBPQ6XZF7 1577 aa19.8■□□□□ 0.76
SDHD-208ENST00000534010 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
SDHD-208ENST00000534010 TARBP1Q13395 1621 aaKnown RBP19.7■□□□□ 0.74
SDHD-208ENST00000534010 ZNF608Q9ULD9 1512 aaPredicted RBP19.67■□□□□ 0.74
SDHD-208ENST00000534010 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
SDHD-208ENST00000534010 CUX1P39880 1505 aa19.61■□□□□ 0.73
SDHD-208ENST00000534010 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
SDHD-208ENST00000534010 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
SDHD-208ENST00000534010 WDR97A6NE52 1622 aa19.54■□□□□ 0.72
SDHD-208ENST00000534010 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
SDHD-208ENST00000534010 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
SDHD-208ENST00000534010 AQRO60306 1485 aaKnown RBP eCLIP19.49■□□□□ 0.71
SDHD-208ENST00000534010 SOGA1O94964 1423 aa19.48■□□□□ 0.71
SDHD-208ENST00000534010 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
SDHD-208ENST00000534010 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
SDHD-208ENST00000534010 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
SDHD-208ENST00000534010 ABCA10Q8WWZ4 1543 aa19.4■□□□□ 0.7
SDHD-208ENST00000534010 CHD1O14646 1710 aa19.39■□□□□ 0.7
SDHD-208ENST00000534010 TDRD9Q8NDG6 1382 aaKnown RBP19.38■□□□□ 0.69
SDHD-208ENST00000534010 ABCA5Q8WWZ7 1642 aa19.37■□□□□ 0.69
SDHD-208ENST00000534010 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
SDHD-208ENST00000534010 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.68
SDHD-208ENST00000534010 WRNQ14191 1432 aaPredicted RBP eCLIP19.33■□□□□ 0.68
SDHD-208ENST00000534010 GRIN2BQ13224 1484 aa19.32■□□□□ 0.68
SDHD-208ENST00000534010 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
SDHD-208ENST00000534010 SNAPC4Q5SXM2 1469 aa19.31■□□□□ 0.68
SDHD-208ENST00000534010 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
SDHD-208ENST00000534010 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
SDHD-208ENST00000534010 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
SDHD-208ENST00000534010 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
SDHD-208ENST00000534010 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
SDHD-208ENST00000534010 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
SDHD-208ENST00000534010 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
SDHD-208ENST00000534010 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
SDHD-208ENST00000534010 ERICH3Q5RHP9 1530 aa19.15■□□□□ 0.66
SDHD-208ENST00000534010 ARAP1Q96P48 1450 aa19.1■□□□□ 0.65
SDHD-208ENST00000534010 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
SDHD-208ENST00000534010 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
SDHD-208ENST00000534010 NUP160Q12769 1436 aa19.08■□□□□ 0.65
SDHD-208ENST00000534010 FBLN2P98095 1184 aa19.08■□□□□ 0.64
SDHD-208ENST00000534010 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
SDHD-208ENST00000534010 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
SDHD-208ENST00000534010 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
SDHD-208ENST00000534010 SHROOM2Q13796 1616 aa19.01■□□□□ 0.63
SDHD-208ENST00000534010 IGF1RP08069 1367 aa18.94■□□□□ 0.62
SDHD-208ENST00000534010 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
SDHD-208ENST00000534010 CUL7Q14999 1698 aa18.92■□□□□ 0.62
SDHD-208ENST00000534010 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
SDHD-208ENST00000534010 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
SDHD-208ENST00000534010 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
SDHD-208ENST00000534010 KIAA0586Q9BVV6 1533 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms